Gene Symbol | SGF29 |
Entrez Gene ID | 449813 |
Full Name | SAGA complex associated factor 29 |
Synonyms | ccdc101,zgc:103544 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
ORF » Species Summary » Danio rerio » SGF29 cDNA ORF clone
Gene Symbol | SGF29 |
Entrez Gene ID | 449813 |
Full Name | SAGA complex associated factor 29 |
Synonyms | ccdc101,zgc:103544 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_005163810.4 | XP_005163867.1 | SAGA-associated factor 29 isoform X1 |
XM_005163810.3 | XP_005163867.1 | SAGA-associated factor 29 isoform X1 |
NM_001005986.1 | NP_001005986.1 | SAGA-associated factor 29 |
XM_005163811.3 | XP_005163868.1 | SAGA-associated factor 29 isoform X1 |
XM_005163811.4 | XP_005163868.1 | SAGA-associated factor 29 isoform X1 |
XM_009299280.2 | XP_009297555.1 | SAGA-associated factor 29 isoform X1 |
Pan troglodytes (chimpanzee) | CCDC101 | XP_510901.1 |
Bos taurus (cattle) | CCDC101 | NP_001068940.2 |
Xenopus tropicalis (tropical clawed frog) | ccdc101 | NP_001120013.1 |
Homo sapiens (human) | CCDC101 | NP_612423.1 |
CCDC101 | XP_001109273.1 | |
Canis lupus familiaris (dog) | CCDC101 | XP_005621416.1 |
Gallus gallus (chicken) | CCDC101 | NP_001026469.1 |
Danio rerio (zebrafish) | ccdc101 | NP_001005986.1 |
Drosophila melanogaster (fruit fly) | Sgf29 | NP_726051.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP005116 | XP_313997.4 |
Mus musculus (house mouse) | Ccdc101 | NP_083615.3 |
Rattus norvegicus (Norway rat) | Ccdc101 | NP_001107974.1 |
Caenorhabditis elegans (roundworm) | Y17G9B.8 | NP_500635.3 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following SGF29 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SGF29 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa33759 | |
Clone ID Related Accession (Same CDS sequence) | NM_001005986.1 | |
Accession Version | NM_001005986.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 750bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-08-05 | |
Organism | Danio rerio(zebrafish) | |
Product | SAGA-associated factor 29 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC083421.1. ##Evidence-Data-START## Transcript exon combination :: BC083421.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGCAGACAG AAAATAAAAC CTCTCCATAT TATCGGACTA AATTGAGAGG TCTTTACACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001005986.1 |
CDS | 298..1047 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001005986.1 |
1 | ATGCAGACAG AAAATAAAAC CTCTCCATAT TATCGGACTA AATTGAGAGG TCTTTACACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08087 | |
Clone ID Related Accession (Same CDS sequence) | XM_005163810.4 , XM_005163810.3 , XM_005163811.3 , XM_005163811.4 , XM_009299280.2 | |
Accession Version | XM_005163810.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 882bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | SAGA-associated factor 29 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005163810.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTTAG TGTCAGCAGA CACCAAAATC GCTGAGTTGC TAAATGAGTT GCATCAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005163867.1 |
CDS | 238..1119 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005163810.4 |
1 | ATGGCTTTAG TGTCAGCAGA CACCAAAATC GCTGAGTTGC TAAATGAGTT GCATCAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08087 | |
Clone ID Related Accession (Same CDS sequence) | XM_005163810.4 , XM_005163810.3 , XM_005163811.3 , XM_005163811.4 , XM_009299280.2 | |
Accession Version | XM_005163810.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 882bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | SAGA-associated factor 29 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005163810.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTTAG TGTCAGCAGA CACCAAAATC GCTGAGTTGC TAAATGAGTT GCATCAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005163867.1 |
CDS | 243..1124 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005163810.3 |
1 | ATGGCTTTAG TGTCAGCAGA CACCAAAATC GCTGAGTTGC TAAATGAGTT GCATCAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08087 | |
Clone ID Related Accession (Same CDS sequence) | XM_005163810.4 , XM_005163810.3 , XM_005163811.3 , XM_005163811.4 , XM_009299280.2 | |
Accession Version | XM_005163811.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 882bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | SAGA-associated factor 29 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005163811.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTTAG TGTCAGCAGA CACCAAAATC GCTGAGTTGC TAAATGAGTT GCATCAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005163868.1 |
CDS | 254..1135 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005163811.3 |
1 | ATGGCTTTAG TGTCAGCAGA CACCAAAATC GCTGAGTTGC TAAATGAGTT GCATCAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08087 | |
Clone ID Related Accession (Same CDS sequence) | XM_005163810.4 , XM_005163810.3 , XM_005163811.3 , XM_005163811.4 , XM_009299280.2 | |
Accession Version | XM_005163811.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 882bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | SAGA-associated factor 29 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005163811.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTTAG TGTCAGCAGA CACCAAAATC GCTGAGTTGC TAAATGAGTT GCATCAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005163868.1 |
CDS | 244..1125 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005163811.4 |
1 | ATGGCTTTAG TGTCAGCAGA CACCAAAATC GCTGAGTTGC TAAATGAGTT GCATCAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa08087 | |
Clone ID Related Accession (Same CDS sequence) | XM_005163810.4 , XM_005163810.3 , XM_005163811.3 , XM_005163811.4 , XM_009299280.2 | |
Accession Version | XM_009299280.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 882bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | SAGA-associated factor 29 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007114.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009299280.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTTAG TGTCAGCAGA CACCAAAATC GCTGAGTTGC TAAATGAGTT GCATCAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009297555.1 |
CDS | 242..1123 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009299280.2 |
1 | ATGGCTTTAG TGTCAGCAGA CACCAAAATC GCTGAGTTGC TAAATGAGTT GCATCAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |