Gene Symbol | ATG16L2 |
Entrez Gene ID | 89849 |
Full Name | autophagy related 16 like 2 |
Synonyms | ATG16B,WDR80 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » ATG16L2 cDNA ORF clone
Gene Symbol | ATG16L2 |
Entrez Gene ID | 89849 |
Full Name | autophagy related 16 like 2 |
Synonyms | ATG16B,WDR80 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001318766.2 | NP_001305695.1 | autophagy-related protein 16-2 isoform 2 |
XM_005274376.4 | XP_005274433.1 | autophagy-related protein 16-2 isoform X1 |
NM_001318766.1 | NP_001305695.1 | autophagy-related protein 16-2 isoform 2 |
XM_011545334.1 | XP_011543636.1 | autophagy-related protein 16-2 isoform X4 |
XM_006718734.2 | XP_006718797.1 | autophagy-related protein 16-2 isoform X6 |
NM_033388.2 | NP_203746.1 | autophagy-related protein 16-2 isoform 1 |
NM_033388.1 | NP_203746.1 | autophagy-related protein 16-2 isoform 1 |
XM_006718732.2 | XP_006718795.1 | autophagy-related protein 16-2 isoform X2 |
XM_011545332.1 | XP_011543634.1 | autophagy-related protein 16-2 isoform X3 |
XM_011545333.1 | XP_011543635.1 | autophagy-related protein 16-2 isoform X4 |
XM_005274376.5 | XP_005274433.1 | autophagy-related protein 16-2 isoform X1 |
XM_006718733.3 | XP_006718796.1 | autophagy-related protein 16-2 isoform X5 |
Homo sapiens (human) | ATG16L2 | NP_203746.1 |
Pan troglodytes (chimpanzee) | ATG16L2 | XP_003313293.1 |
Canis lupus familiaris (dog) | ATG16L2 | XP_542323.3 |
ATG16L2 | XP_001110048.1 | |
Rattus norvegicus (Norway rat) | Atg16l2 | NP_001178489.1 |
Danio rerio (zebrafish) | LOC100007282 | XP_001345780.5 |
Xenopus tropicalis (tropical clawed frog) | LOC100485143 | XP_004919971.1 |
Bos taurus (cattle) | ATG16L2 | NP_001179209.1 |
Mus musculus (house mouse) | Atg16l2 | NP_001104581.1 |
A functional variant of ATG16L2 is associated with Crohn's disease in the Chinese population.
Ma T, Wu S, Yan W, Xie R, Zhou C
Colorectal disease : the official journal of the Association of Coloproctology of Great Britain and Ireland18(11)O420-O426(2016 Nov)
Identification of a Systemic Lupus Erythematosus Risk Locus Spanning ATG16L2, FCHSD2, and P2RY2 in Koreans.
Lessard CJ, Sajuthi S, Zhao J, Kim K, Ice JA, Li H, Ainsworth H, Rasmussen A, Kelly JA, Marion M, Bang SY, Joo YB, Choi J, Lee HS, Kang YM, Suh CH, Chung WT, Lee SK, Choe JY, Shim SC, Oh JH, Kim YJ, Han BG, Shen N, Howe HS, Wakeland EK, Li QZ, Song YW, Gaffney PM, Alarc?n-Riquelme ME, Criswell LA, Jacob CO, Kimberly RP, Vyse TJ, Harley JB, Sivils KL, Bae SC, Langefeld CD, Tsao BP
Arthritis & rheumatology (Hoboken, N.J.)68(5)1197-1209(2016 05)
Autophagy-related gene16L2, a potential serum biomarker of multiple sclerosis evaluated by bead-based proteomic technology.
Yin L, Liu J, Dong H, Xu E, Qiao Y, Wang L, Zhang L, Jia J, Li L, Geng X
Neuroscience letters56234-8(2014 Mar)
Genome-wide association study of Crohn's disease in Koreans revealed three new susceptibility loci and common attributes of genetic susceptibility across ethnic populations.
Yang SK, Hong M, Zhao W, Jung Y, Baek J, Tayebi N, Kim KM, Ye BD, Kim KJ, Park SH, Lee I, Lee EJ, Kim WH, Cheon JH, Kim YH, Jang BI, Kim HS, Choi JH, Koo JS, Lee JH, Jung SA, Lee YJ, Jang JY, Shin HD, Kang D, Youn HS, Liu J, Song K
Gut63(1)80-7(2014 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
ATG16L2 is a susceptibility gene for Crohn's disease in the Chinese population. The rs11235604 single nucleotide polymorphism is remarkably associated with downregulation of the expression of ATG16L2.
Title: A functional variant of ATG16L2 is associated with Crohn's disease in the Chinese population.
A novel SNP-systemic lupus erythematosus association was identified between FCHSD2 and P2RY2, peaking at rs11235667 on a 33-kb haplotype upstream of ATG16L2.
Title: Identification of a Systemic Lupus Erythematosus Risk Locus Spanning ATG16L2, FCHSD2, and P2RY2 in Koreans.
Atg16L2 may play an important role in autophagy of T cells and serve as a potential biomarker to predict clinical relapse of Multiple sclerosis
Title: Autophagy-related gene16L2, a potential serum biomarker of multiple sclerosis evaluated by bead-based proteomic technology.
Three novel risk loci including ATG16L2 were discovered by genome-wide association study in the Korean Crohn's disease population, of which two showed patterns of association in the International Inflammatory Bowel Disease Genetics Consortium dataset.
Title: Genome-wide association study of Crohn's disease in Koreans revealed three new susceptibility loci and common attributes of genetic susceptibility across ethnic populations.
The following ATG16L2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ATG16L2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu05423 | |
Clone ID Related Accession (Same CDS sequence) | NM_033388.2 , NM_033388.1 | |
Accession Version | NM_033388.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1860bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-19 | |
Organism | Homo sapiens(human) | |
Product | autophagy-related protein 16-2 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BQ929430.1, BC069189.1, BC036713.2, AK024423.1, AK090597.1 and AL832974.1. On Nov 23, 2018 this sequence version replaced NM_033388.1. Transcript Variant: This variant (1) encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: AK093017.1, BC137489.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000321297.10/ ENSP00000326340.5 RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGGCGGGGC CGGGCGTCCC CGGTGCCCCC GCAGCGCGCT GGAAACGCCA CATCGTGCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_203746.1 |
CDS | 36..1895 |
Translation |
Target ORF information:
Target ORF information:
|
NM_033388.2 |
1 | ATGGCGGGGC CGGGCGTCCC CGGTGCCCCC GCAGCGCGCT GGAAACGCCA CATCGTGCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu05423 | |
Clone ID Related Accession (Same CDS sequence) | NM_033388.2 , NM_033388.1 | |
Accession Version | NM_033388.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1860bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-09-30 | |
Organism | Homo sapiens(human) | |
Product | autophagy-related protein 16-2 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BQ929430.1, BC069189.1, BC036713.2, AK024423.1, AK090597.1 and AL832974.1. On Nov 22, 2004 this sequence version replaced XM_058426.9. Transcript Variant: This variant (1) encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: AK093017.1, BC137489.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGGGC CGGGCGTCCC CGGTGCCCCC GCAGCGCGCT GGAAACGCCA CATCGTGCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_203746.1 |
CDS | 41..1900 |
Translation |
Target ORF information:
Target ORF information:
|
NM_033388.1 |
1 | ATGGCGGGGC CGGGCGTCCC CGGTGCCCCC GCAGCGCGCT GGAAACGCCA CATCGTGCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu45586 | |
Clone ID Related Accession (Same CDS sequence) | NM_001318766.2 , NM_001318766.1 , XM_011545334.1 , XM_011545333.1 | |
Accession Version | NM_001318766.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1542bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-19 | |
Organism | Homo sapiens(human) | |
Product | autophagy-related protein 16-2 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC137489.1, AK090597.1, AP002381.3 and AL832974.1. On May 31, 2019 this sequence version replaced NM_001318766.1. Transcript Variant: This variant (2) uses an alternate splice junction compared to variant 1. The resulting isoform (2) is shorter at the N-terminus compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: AK090597.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCCTACC AGGTGGTGGA GAAGGGCGCG GCCCTGGGCA CGCTGGAGTC GGAGCTGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001305695.1 |
CDS | 474..2015 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001318766.2 |
1 | ATGGCCTACC AGGTGGTGGA GAAGGGCGCG GCCCTGGGCA CGCTGGAGTC GGAGCTGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu45586 | |
Clone ID Related Accession (Same CDS sequence) | NM_001318766.2 , NM_001318766.1 , XM_011545334.1 , XM_011545333.1 | |
Accession Version | NM_001318766.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1542bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-30 | |
Organism | Homo sapiens(human) | |
Product | autophagy-related protein 16-2 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC137489.1, AK090597.1, AP002381.3 and AL832974.1. On Jan 14, 2016 this sequence version replaced XM_005274378.2. Transcript Variant: This variant (2) uses an alternate splice junction compared to variant 1. The resulting isoform (2) is shorter at the N-terminus compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: AK090597.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCCTACC AGGTGGTGGA GAAGGGCGCG GCCCTGGGCA CGCTGGAGTC GGAGCTGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001305695.1 |
CDS | 479..2020 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001318766.1 |
1 | ATGGCCTACC AGGTGGTGGA GAAGGGCGCG GCCCTGGGCA CGCTGGAGTC GGAGCTGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu45584 | |
Clone ID Related Accession (Same CDS sequence) | XM_005274376.4 , XM_005274376.5 | |
Accession Version | XM_005274376.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1815bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | autophagy-related protein 16-2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_005274376.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGGGC CGGGCGTCCC CGGTGCCCCC GCAGCGCGCT GGAAACGCCA CATCGTGCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005274433.1 |
CDS | 40..1854 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005274376.4 |
1 | ATGGCGGGGC CGGGCGTCCC CGGTGCCCCC GCAGCGCGCT GGAAACGCCA CATCGTGCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu45584 | |
Clone ID Related Accession (Same CDS sequence) | XM_005274376.4 , XM_005274376.5 | |
Accession Version | XM_005274376.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1815bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | autophagy-related protein 16-2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_005274376.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGGGC CGGGCGTCCC CGGTGCCCCC GCAGCGCGCT GGAAACGCCA CATCGTGCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005274433.1 |
CDS | 40..1854 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005274376.5 |
1 | ATGGCGGGGC CGGGCGTCCC CGGTGCCCCC GCAGCGCGCT GGAAACGCCA CATCGTGCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu45585 | |
Clone ID Related Accession (Same CDS sequence) | XM_006718732.2 | |
Accession Version | XM_006718732.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1797bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | autophagy-related protein 16-2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced XM_006718732.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGGGC CGGGCGTCCC CGGTGCCCCC GCAGCGCGCT GGAAACGCCA CATCGTGCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006718795.1 |
CDS | 40..1836 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006718732.2 |
1 | ATGGCGGGGC CGGGCGTCCC CGGTGCCCCC GCAGCGCGCT GGAAACGCCA CATCGTGCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu45586 | |
Clone ID Related Accession (Same CDS sequence) | NM_001318766.2 , NM_001318766.1 , XM_011545334.1 , XM_011545333.1 | |
Accession Version | XM_011545334.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1542bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | autophagy-related protein 16-2 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCTACC AGGTGGTGGA GAAGGGCGCG GCCCTGGGCA CGCTGGAGTC GGAGCTGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011543636.1 |
CDS | 220..1761 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011545334.1 |
1 | ATGGCCTACC AGGTGGTGGA GAAGGGCGCG GCCCTGGGCA CGCTGGAGTC GGAGCTGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu45586 | |
Clone ID Related Accession (Same CDS sequence) | NM_001318766.2 , NM_001318766.1 , XM_011545334.1 , XM_011545333.1 | |
Accession Version | XM_011545333.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1542bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | autophagy-related protein 16-2 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCTACC AGGTGGTGGA GAAGGGCGCG GCCCTGGGCA CGCTGGAGTC GGAGCTGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011543635.1 |
CDS | 807..2348 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011545333.1 |
1 | ATGGCCTACC AGGTGGTGGA GAAGGGCGCG GCCCTGGGCA CGCTGGAGTC GGAGCTGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu45587 | |
Clone ID Related Accession (Same CDS sequence) | XM_006718733.3 | |
Accession Version | XM_006718733.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1023bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | autophagy-related protein 16-2 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_006718733.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGGGC CGGGCGTCCC CGGTGCCCCC GCAGCGCGCT GGAAACGCCA CATCGTGCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006718796.1 |
CDS | 40..1062 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006718733.3 |
1 | ATGGCGGGGC CGGGCGTCCC CGGTGCCCCC GCAGCGCGCT GGAAACGCCA CATCGTGCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu45588 | |
Clone ID Related Accession (Same CDS sequence) | XM_006718734.2 | |
Accession Version | XM_006718734.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1005bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | autophagy-related protein 16-2 isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 12, 2015 this sequence version replaced XM_006718734.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTCAGG GGAGCTGGAG GCTCCCACCT GAGAAGGACT TGCTGAATGC CCTCCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006718797.1 |
CDS | 2075..3079 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006718734.2 |
1 | ATGCCTCAGG GGAGCTGGAG GCTCCCACCT GAGAAGGACT TGCTGAATGC CCTCCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu74099 | |
Clone ID Related Accession (Same CDS sequence) | XM_011545332.1 | |
Accession Version | XM_011545332.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1746bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | autophagy-related protein 16-2 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGGGC CGGGCGTCCC CGGTGCCCCC GCAGCGCGCT GGAAACGCCA CATCGTGCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011543634.1 |
CDS | 40..1785 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011545332.1 |
1 | ATGGCGGGGC CGGGCGTCCC CGGTGCCCCC GCAGCGCGCT GGAAACGCCA CATCGTGCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A functional variant of ATG16L2 is associated with Crohn's disease in the Chinese population. |
Identification of a Systemic Lupus Erythematosus Risk Locus Spanning ATG16L2, FCHSD2, and P2RY2 in Koreans. |
Autophagy-related gene16L2, a potential serum biomarker of multiple sclerosis evaluated by bead-based proteomic technology. |
Genome-wide association study of Crohn's disease in Koreans revealed three new susceptibility loci and common attributes of genetic susceptibility across ethnic populations. |