LINJ_10_1300 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_10_1300
Entrez Gene ID	5067014
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001463737.1	XP_001463774.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_10_1300 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_10_1300 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc00952	XM_001463737.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_10_1300 ( XM_001463737.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001463774.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc00952
Clone ID Related Accession (Same CDS sequence)	XM_001463737.1
Accession Version	XM_001463737.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3189bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009394). COMPLETENESS: incomplete on both ends.

ATGGCGGTCC TGCAGCAGTC CACAAGCGCG TACTCTATAA TCTTCGTGTC TCGTGCCGCA 
TCAGAATGCT TGGAGACGCT GTTTGTGGAT GCAGACGAGC TGACGCAGTT TACGCTGAGC 
GTGTATGAGC TGCTGTGCGT TCGGGATGCC GGGCTGAACG CGGCGGCTAA GCTGGCGCTG 
CGCCAACTCG TGTGCGTGGC CGTTCAGAGG GGTTATCATT ACTCCCACAC GCTGGCACAG 
ATGCCGTCAA GTGTGTGCGC ATCGTGCTCC TCCTCGATTC AAGCTGGTGA TCAAGGCGAT 
CGGCTTCGCG TAGGCTGCGA GGTGCTCACC GACCTTGTCA TCACGCTGAG TGAGCGGCGC 
ATGACCACCT TTGCCACTGA CGTGAGCATT GCGAAGTCCT TCCGCGATGA CCACCTCCTC 
AGTGTTTTCC GATTAGCCGT TCGAGTAGTG AAGGAAGTGC AGCCGAGCAG TCGAACGGTC 
GTGGCAGCCG GGCTTAGGCT AGCGCAGCAC GTGCTAGAGT TCGACTTTGC GTGCGACACC 
ATGCAAACAG AGGCCGAGGA GAATCCTGTG ACGAGAACGT ATCCAGATAG CTGGGCAGCA 
GACCTCTTGG ACCTGCAGCT GATGGACCGG CTATGGTTCT TGTACCGAAT TCCCGACCTG 
GAGCCGGATG TGGCGCACAC ATTGCTGGAG GTACTGACCT CGCTGGTGAG TTTGCGCAAA 
TCGTTCTTCG CCGACGTCGA GCTGCGACCG CGGTGGTACG CGGTAGTCCT GCTACAGACG 
CACCTCGTCA TGGAGCGCTT CCTGCACCTG GAAGACGAGG AGACGCTCAG CGCCTTCGCG 
CGACTTCTCA ATCGCATGAA GCCTAACTGC GACCTCCGTG AACTCATGCA GCTGACGGAG 
TTCTCGCCGT GGCTGCGGTC CCTCTGCAGC TTCACAAGGC AGTGCCTGGC CAACTGGAAG 
CACGCCTCGA CATCACTGCT GTCCCTGCTA AGTGTGTGGG GACGCCTCAT CGAAGCCAAG 
TCGTACGCCA CGCAGGATAC GGCGGAGATG CTGCACTGTG GCCTGCAGGT AGTGGGTTGC 
TACCTTGAAT GCCTTCACAG CCGCGTACAA ACGTTCACGA TGGAGTTGGC TAAGTTCATG 
AGCAGCGACA GCGCCGCCAT GCGACAGGCA AACTCCAATA GCATGCCGGT CGAGTACATT 
CTGGACGACG ACGAGGAGGG GGTCCGACTT GAGGTCGAGT TTCTCCTGAA GGTAGTGATA 
GGGTGCGGCG AGGAGGGCTG GACGATGCTC GAGGCCAACT CGGAGCGGGT AAGTCAATCC 
GTGCTGGCAC ACGTGCGCCC GAACGCTTCT GCTGTCTCGG TCGACCACAT CGTGCTTATG 
GAGGAGGCGG CGTGGTCTCT GCATCTGCTC AGCGCCGCAC TGCACTCCGA CGGCGCTATC 
GACAGCGGTG CCGCCCGCGT TCTTGCCATG CTCCTGCACA GCCTCATACT GCTTCAGCGC 
TTCTCCACCC ATGTCGTGTT TCTCGACAGC GTCCCCGGCT CCGTTCGTGG GCATATCGCG 
GCGGCAACCA CGCGCGTTCT CGCCGCAATC CTCTCCAAGA CCGTGTCGGT GTACGTGGTG 
TCCAACCGTA AGACCTCTGC CTTTGTCGAG CAGCTCAGTA GCCAGCTGCG GCAGTGCGGA 
GAGATGGATA CAGCAGGGAC GTTTGGTGCC TACTTTCTGA ATGTCGCCGT CCACGCGCTG 
TGGACGATAC TCAGCGCGAC AAACATGCCC GACGAGGTGC GCGTGGCGGC GCTGCAGCTG 
TTGGACGAGT GGACCTCTAC CTCGAGTGTG TTGCGGGTGC TCAAGGAAAC GCGCTCGTAC 
ACGTATCTGA TGAACCTCCA CAACGAATCC ATCCCAGCCC CACTGCAGCG CCCGGTAGCG 
CTCAAGGCGC GGTACCTGTT TATTCGATGT GTGGCACAAG TGCGCTTCCT CGACGCCTCC 
GCGCTCACAG ACTCTGTAGT GAACACCCTC ATGGAGCCGG TGCTGGCGCG CATTTCACAG 
GCAGTGTACG GGGCCGCCAC TGGCGGGTCT AGCGCGGAGA GCACTGACCG CCTGACACTG 
GCGCTCTGCG ACATGCGCGG CATCCTGAGC TGCACGGAGC GCCGACCGTA CCGAGTAGTA 
ATGGACATGA TCGAGCCTTT TCTGTATCCT GTAGCCGACG CCGTACTACA AGAAAGCAGC 
TGCGGCGAGG AGACTGTAAC GCAGCTCCTG GAGCTGGTGA ATGAGATGGC GCTGAACAAG 
AACCAGCGCA TCGCCTTTGG GGCACAGAGC GCGAAACCCG TGCACATATT TCGCTATGTG 
AGCCGGGTGG TGGTGCGCTC CGCACGGCTT GTCCATCTTA TCTTGGGGGG CAGCGTAACG 
GGACCAAGCG CACAAACCCC GTCGCCACCG CTGGTGGAGT GGGGGTGGAA AGTGATGCGG 
CTGGGCCTTT TGGCAGCGTA CCACATTTTG CAGGGAGGGT GGTGCAACTT GGGGGTGCTG 
CAGCTCTACG AGGACACGGC GCTCACGAGC CTGCTGTCTA GTGTGTGGGG CCTGCTGTGC 
AGGTTGCCTG TACATGAGTA CATAGTGCGC TCGAAGGTGT GCACGGCTGT GATCAAGGTG 
GTGAACGTGC TGGCTGCGCG TTTCTTCCAC GACTTCTGGG CGAAGCAGCC GCCGCGGGAG 
GTGTTCACTG TCGTTGGCTT TGTGGAGTCG CTTGCCTTCC CGGCCAGCAT CAACGCCGTC 
GAAGCCGCAC AGCAGAATGA CGCGCTGCAG GCGATGGACC GCCTCGTGAA CTGCTGTTGG 
GTGCGCACTG CGTATCCGAT AGAGGATTTG CAGCAGGCGG CCGTCATGAA GTCGACGCTG 
CTGCGGGCGG ACGCGATGGT GTTTCACCGC CTTGTCACAT GTGCGCTCGA GCGCTCCGTG 
GCGGTTGATA ACCACGGAAT GAGGAAGTTG CTGCTTCCTC TGTTCTACGT GGAGGGCAGC 
GCTGTGGGCG AGGTGGCGCA GTATTTCTGC TCCCGTGCCA CAACACCGGC CGCCGCGCAT 
GCGTTGCAGG TACAGTTCTC AGATATTCAG CGCCACGTCA CTGAAAGCGG CGACATCACC 
AGCAAGACAA TGGATGAGCT TGCAAACGCC CTGCACACAC TCATGAGCAC GCTAAAGGAA 
TCGCTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001463774.1
CDS	1..3189
Translation	MAVLQQSTSAYSIIFVSRAASECLETLFVDADELTQFTLSVYELLCVRDAGLNAAAKLALRQLVCVAVQRGYHYSHTLAQMPSSVCASCSSSIQAGDQGDRLRVGCEVLTDLVITLSERRMTTFATDVSIAKSFRDDHLLSVFRLAVRVVKEVQPSSRTVVAAGLRLAQHVLEFDFACDTMQTEAEENPVTRTYPDSWAADLLDLQLMDRLWFLYRIPDLEPDVAHTLLEVLTSLVSLRKSFFADVELRPRWYAVVLLQTHLVMERFLHLEDEETLSAFARLLNRMKPNCDLRELMQLTEFSPWLRSLCSFTRQCLANWKHASTSLLSLLSVWGRLIEAKSYATQDTAEMLHCGLQVVGCYLECLHSRVQTFTMELAKFMSSDSAAMRQANSNSMPVEYILDDDEEGVRLEVEFLLKVVIGCGEEGWTMLEANSERVSQSVLAHVRPNASAVSVDHIVLMEEAAWSLHLLSAALHSDGAIDSGAARVLAMLLHSLILLQRFSTHVVFLDSVPGSVRGHIAAATTRVLAAILSKTVSVYVVSNRKTSAFVEQLSSQLRQCGEMDTAGTFGAYFLNVAVHALWTILSATNMPDEVRVAALQLLDEWTSTSSVLRVLKETRSYTYLMNLHNESIPAPLQRPVALKARYLFIRCVAQVRFLDASALTDSVVNTLMEPVLARISQAVYGAATGGSSAESTDRLTLALCDMRGILSCTERRPYRVVMDMIEPFLYPVADAVLQESSCGEETVTQLLELVNEMALNKNQRIAFGAQSAKPVHIFRYVSRVVVRSARLVHLILGGSVTGPSAQTPSPPLVEWGWKVMRLGLLAAYHILQGGWCNLGVLQLYEDTALTSLLSSVWGLLCRLPVHEYIVRSKVCTAVIKVVNVLAARFFHDFWAKQPPREVFTVVGFVESLAFPASINAVEAAQQNDALQAMDRLVNCCWVRTAYPIEDLQQAAVMKSTLLRADAMVFHRLVTCALERSVAVDNHGMRKLLLPLFYVEGSAVGEVAQYFCSRATTPAAAHALQVQFSDIQRHVTESGDITSKTMDELANALHTLMSTLKESL

Target ORF information:

RefSeq Version	XM_001463737.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001463737.1

ORF Insert Sequence:

ATGGCGGTCC TGCAGCAGTC CACAAGCGCG TACTCTATAA TCTTCGTGTC TCGTGCCGCA 
TCAGAATGCT TGGAGACGCT GTTTGTGGAT GCAGACGAGC TGACGCAGTT TACGCTGAGC 
GTGTATGAGC TGCTGTGCGT TCGGGATGCC GGGCTGAACG CGGCGGCTAA GCTGGCGCTG 
CGCCAACTCG TGTGCGTGGC CGTTCAGAGG GGTTATCATT ACTCCCACAC GCTGGCACAG 
ATGCCGTCAA GTGTGTGCGC ATCGTGCTCC TCCTCGATTC AAGCTGGTGA TCAAGGCGAT 
CGGCTTCGCG TAGGCTGCGA GGTGCTCACC GACCTTGTCA TCACGCTGAG TGAGCGGCGC 
ATGACCACCT TTGCCACTGA CGTGAGCATT GCGAAGTCCT TCCGCGATGA CCACCTCCTC 
AGTGTTTTCC GATTAGCCGT TCGAGTAGTG AAGGAAGTGC AGCCGAGCAG TCGAACGGTC 
GTGGCAGCCG GGCTTAGGCT AGCGCAGCAC GTGCTAGAGT TCGACTTTGC GTGCGACACC 
ATGCAAACAG AGGCCGAGGA GAATCCTGTG ACGAGAACGT ATCCAGATAG CTGGGCAGCA 
GACCTCTTGG ACCTGCAGCT GATGGACCGG CTATGGTTCT TGTACCGAAT TCCCGACCTG 
GAGCCGGATG TGGCGCACAC ATTGCTGGAG GTACTGACCT CGCTGGTGAG TTTGCGCAAA 
TCGTTCTTCG CCGACGTCGA GCTGCGACCG CGGTGGTACG CGGTAGTCCT GCTACAGACG 
CACCTCGTCA TGGAGCGCTT CCTGCACCTG GAAGACGAGG AGACGCTCAG CGCCTTCGCG 
CGACTTCTCA ATCGCATGAA GCCTAACTGC GACCTCCGTG AACTCATGCA GCTGACGGAG 
TTCTCGCCGT GGCTGCGGTC CCTCTGCAGC TTCACAAGGC AGTGCCTGGC CAACTGGAAG 
CACGCCTCGA CATCACTGCT GTCCCTGCTA AGTGTGTGGG GACGCCTCAT CGAAGCCAAG 
TCGTACGCCA CGCAGGATAC GGCGGAGATG CTGCACTGTG GCCTGCAGGT AGTGGGTTGC 
TACCTTGAAT GCCTTCACAG CCGCGTACAA ACGTTCACGA TGGAGTTGGC TAAGTTCATG 
AGCAGCGACA GCGCCGCCAT GCGACAGGCA AACTCCAATA GCATGCCGGT CGAGTACATT 
CTGGACGACG ACGAGGAGGG GGTCCGACTT GAGGTCGAGT TTCTCCTGAA GGTAGTGATA 
GGGTGCGGCG AGGAGGGCTG GACGATGCTC GAGGCCAACT CGGAGCGGGT AAGTCAATCC 
GTGCTGGCAC ACGTGCGCCC GAACGCTTCT GCTGTCTCGG TCGACCACAT CGTGCTTATG 
GAGGAGGCGG CGTGGTCTCT GCATCTGCTC AGCGCCGCAC TGCACTCCGA CGGCGCTATC 
GACAGCGGTG CCGCCCGCGT TCTTGCCATG CTCCTGCACA GCCTCATACT GCTTCAGCGC 
TTCTCCACCC ATGTCGTGTT TCTCGACAGC GTCCCCGGCT CCGTTCGTGG GCATATCGCG 
GCGGCAACCA CGCGCGTTCT CGCCGCAATC CTCTCCAAGA CCGTGTCGGT GTACGTGGTG 
TCCAACCGTA AGACCTCTGC CTTTGTCGAG CAGCTCAGTA GCCAGCTGCG GCAGTGCGGA 
GAGATGGATA CAGCAGGGAC GTTTGGTGCC TACTTTCTGA ATGTCGCCGT CCACGCGCTG 
TGGACGATAC TCAGCGCGAC AAACATGCCC GACGAGGTGC GCGTGGCGGC GCTGCAGCTG 
TTGGACGAGT GGACCTCTAC CTCGAGTGTG TTGCGGGTGC TCAAGGAAAC GCGCTCGTAC 
ACGTATCTGA TGAACCTCCA CAACGAATCC ATCCCAGCCC CACTGCAGCG CCCGGTAGCG 
CTCAAGGCGC GGTACCTGTT TATTCGATGT GTGGCACAAG TGCGCTTCCT CGACGCCTCC 
GCGCTCACAG ACTCTGTAGT GAACACCCTC ATGGAGCCGG TGCTGGCGCG CATTTCACAG 
GCAGTGTACG GGGCCGCCAC TGGCGGGTCT AGCGCGGAGA GCACTGACCG CCTGACACTG 
GCGCTCTGCG ACATGCGCGG CATCCTGAGC TGCACGGAGC GCCGACCGTA CCGAGTAGTA 
ATGGACATGA TCGAGCCTTT TCTGTATCCT GTAGCCGACG CCGTACTACA AGAAAGCAGC 
TGCGGCGAGG AGACTGTAAC GCAGCTCCTG GAGCTGGTGA ATGAGATGGC GCTGAACAAG 
AACCAGCGCA TCGCCTTTGG GGCACAGAGC GCGAAACCCG TGCACATATT TCGCTATGTG 
AGCCGGGTGG TGGTGCGCTC CGCACGGCTT GTCCATCTTA TCTTGGGGGG CAGCGTAACG 
GGACCAAGCG CACAAACCCC GTCGCCACCG CTGGTGGAGT GGGGGTGGAA AGTGATGCGG 
CTGGGCCTTT TGGCAGCGTA CCACATTTTG CAGGGAGGGT GGTGCAACTT GGGGGTGCTG 
CAGCTCTACG AGGACACGGC GCTCACGAGC CTGCTGTCTA GTGTGTGGGG CCTGCTGTGC 
AGGTTGCCTG TACATGAGTA CATAGTGCGC TCGAAGGTGT GCACGGCTGT GATCAAGGTG 
GTGAACGTGC TGGCTGCGCG TTTCTTCCAC GACTTCTGGG CGAAGCAGCC GCCGCGGGAG 
GTGTTCACTG TCGTTGGCTT TGTGGAGTCG CTTGCCTTCC CGGCCAGCAT CAACGCCGTC 
GAAGCCGCAC AGCAGAATGA CGCGCTGCAG GCGATGGACC GCCTCGTGAA CTGCTGTTGG 
GTGCGCACTG CGTATCCGAT AGAGGATTTG CAGCAGGCGG CCGTCATGAA GTCGACGCTG 
CTGCGGGCGG ACGCGATGGT GTTTCACCGC CTTGTCACAT GTGCGCTCGA GCGCTCCGTG 
GCGGTTGATA ACCACGGAAT GAGGAAGTTG CTGCTTCCTC TGTTCTACGT GGAGGGCAGC 
GCTGTGGGCG AGGTGGCGCA GTATTTCTGC TCCCGTGCCA CAACACCGGC CGCCGCGCAT 
GCGTTGCAGG TACAGTTCTC AGATATTCAG CGCCACGTCA CTGAAAGCGG CGACATCACC 
AGCAAGACAA TGGATGAGCT TGCAAACGCC CTGCACACAC TCATGAGCAC GCTAAAGGAA 
TCGCTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_10_1300 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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