LINJ_15_0380 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_15_0380
Entrez Gene ID	5067764
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001464339.1	XP_001464376.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_15_0380 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_15_0380 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc01562	XM_001464339.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$629.30 $899.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_15_0380 ( XM_001464339.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001464376.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc01562
Clone ID Related Accession (Same CDS sequence)	XM_001464339.1
Accession Version	XM_001464339.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3063bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009399). COMPLETENESS: incomplete on both ends.

ATGTTGCCCT ACGCTATTCG GCAGATTGTA TGGATGCTCA CCAGTGCCCT GCAGCTGATC 
TACGCGCTCA GCACAGGGGT GGTGTGGGTG ATGCAGATGC TGCGGTTTTT CGTCTACGGC 
GCCTGCGTTG GGGTGTGCTT TATCCCACAC TGGTGGTGGT ACCTGACTTC GCCCAACATC 
ATTCGCCGCG TGTCGTACCG CTCCTCCGAG AAGACGAAGC GGCGCAATAT CTTGCGCGTG 
CTGGAGGCAG AGGGGGTCGA CCTGCGTGAG GTGCTGTGCA AGGACTCCAT CGCGCAAGCA 
ACGCAGCCAT CACAGCAGAT GCAGCTACCA CCATCCCCAG CCACTGCAGC GGCGGCGGCG 
CGTCGTCGAC GTCGTCTAGC GACTGTGGCT GGCGCCGGGC AGCAGGATGG AGCAGCAAGA 
GACTGCAGTG ACAGCCTGCC CCACACGGTC GACGGCGAAG TCGATGATCG TTCTCTCTCC 
CAGCTGCATA ACCCCTCCCC CTTCTCCACT CTGCGATGCT GGGAAGCCTC TGGCAGCGGG 
TATGACCAAC GCACGCCGCT TGGCCTCAGC AGCGAGCCTT TAGGCCGTGA CTCCGACAGC 
TACGATGAGG CCAGCTTCGT TTCCTCGTCT TCGCAGCGCC GCCGCCGCCG CCCAACACCA 
TCTCGCTCGG CGCTGACTAG ACCATGTCAC GGCGGCACCG AAGCCTCCAC GAGCGGCCCG 
CCCGGCGCCA CGGCGCTTGA GCGACTGATG GGCGCCGTCA CGTGCAACCT AAACCCGGCT 
GACGGCTCCG CCATGCGTAG CTTGCCGCTG CGACGGCGCC AGCAGTCCCA ACCTCAGCGG 
CCCATCATCG AAGACGCCGC TGCGCACCGC TCGCGCGAGC CGGAAGAAGG CATCGAGCGG 
CGGCAGGATG CTCACAACGG CCCTTCCGTG ACTGCCACGG CACGCGCCAA GGCACACAGC 
AGCTCGTCAT CAAGCGGTGG AACAGAAACC CAGCCTCGCA AGCCTCGGCG TGATGCCACA 
GGCGACGAGG CTGCCGTCTG CCGCGCAGCA CCGGAGGACA GCACGGAAGA GCAGATGAAC 
GGCTGCAGAC TTCGCGGCAG CCCGCAGCGC GTGCAGGGGT ACGAAGGCCG CCCTGTGCAC 
TACAAGACGC TGCCCAAGGT GAACCCCTCG AGCGATCCGA TGCTGCGAGA TGTGCTTGCC 
GCCTTTCACG AGGCGGAGGC GTCGGACGTG ACGGTGGGGC TCTCACAAGC TGGCCACCCG 
TCAGGGCCGC ATTCGCGACG CCAGCCCGGC GGCGCGGCGG CGAGGCGGCC GCGTCGGCGA 
AGTGGAGCGC CGCCGCCACA GCGCCGGGGG AAAGCTGCTC ACGAGCCGCG TGCGCAACCG 
CAACACAAGC CGCGCGCCCG CACGTTCTCC GAAGAAAACC TCTTTGCCGA ACTTGACGAG 
GAGGACGAGG AGGATCGCAT GAACCTGCAC AACCGCGCTA CCGTCGACAT TGTCCTGCCG 
GCGCCGCTGG ACGCCATCAT GAAGACGCTC GAGTACACCC AGCAGAGCAA GCGGCTGCGC 
CGCAAGCGCT TTCCTATTGT AATCGACGTC TCGGGGGTGG CATGGATCAT CGGCAGCCAC 
CTCTGGAGCA CCATGATAGC GCGGGTGCTG GCACAGCGCG GTTACGTTGT CTTCTGCCCC 
GACTACCGCA ACTTCCCGCA GACGACGATG GAGGGCATGA CGCTGGACGT CTCGGACGCC 
ATCGCGTGGG TGCTGAACAA CGCGGAGCGC TACAACGGCG ACCTGAACAA TGTGACGCTG 
ATTGGGCAGT CCGCCGGTGC GCACCTGACG ATGATGTCGC TGCTGTCGCA GGCGCAGCTC 
TCCGCGTACC GGCACAACGC CGAGAAGGGC ATCCACGAAG GCGTTCCACC GCCGTCGGAC 
GTCGCCTACA ACGTCCCCCG CTACAACCCG CGTGAGTCGA TCCACCGCTA CGTCGGCCTC 
AGCGGCATGT ACAATATCGA GGGTCTCGTG GACCACTTCC AGGCCGCGGG TCTCACCACC 
CCGGTGCTGT ACCAGATCGC CGGCGGCCGG GACCAGCTAG CGCGCTACAC GCTGAACGCG 
TACTTCGACG ACCGCCGCGG CGGCGACACG GGCGAGGTGC TGCCGGACAA CATTTTTGAC 
TTTTTCCCAC AGCGCATGTT CTTTGTGCAC GGCGACGCGG ACAAGAGCGC GCCCGTCACG 
GAGAGCGCGT CCCTTGTCGG AATGATGCGG GCGGCGCAGG AGCGCTACAC GCTGAGGCGC 
AGTGCACGCA ACGAGGAGGC GCGGCGTCAC GCACAACGCA GTCGTCGTTT GTTGCCGGGT 
GCCTTGGCTG CCGCCGCCGG TGAAGTGAAG AGCAGCAGTG CGGCCACAGC GGCCGGTGTC 
TTCCCAAGTC CATTGACGGG ATTGCCGTCG CGGCGTGCGA CGGTGGTGGA CTTCGATACG 
GTGGACTCAG CAGCAGCCGC GACGGCTGCC GAGCAGGCGG TTGGCGCGGC CGTGAGGTTG 
GCCGACAATC AAGAGATCAT CTTCGTCCAC AGTAAGGACC TTGTCGATAC CGGTGCAGCA 
CCGAACGCGG CTCAGCAGCA GCAGTACTCC TACGGGACAG GAGCGCCTCG TGCTTCGATT 
CTGTCGCCGA CGAAGATCAG CCCCATCATT CCACCCTCAC GCGAGGACCG TCCTCAGCCG 
CCGGTGGAGC TTGGCTTTCT CGTCATCCCT GGCGGTCGAC ACTCGGACGC CTTCGTGGAT 
GAATGCATCG CCGCGGGTCG CAGCTGCTGC GTTGACTTTT TGTGCGACTA CGAGTCGACG 
ATCGACTTCC AAGGCAACGC CTTAGAGCCG GGCTCGCACG GGCCCAACGC CGAGGGCGCC 
AGTGGGAACT CCCTCGGCGA CTCGGTGTGG ACCTCATCCT TGCCGGAGGC GGACAAGGCG 
CCACTCTCAT GGGCGCATGC GCCAGAGATG AGTGTGATGC CTGACGCGGT GCTGCCGCTT 
GCCGTGCCCT ACGAAGATCG CTCGCTGCCA CTGCGACTGT GCACAATGAT CTGTCCATTC 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001464376.1
CDS	1..3063
Translation	MLPYAIRQIVWMLTSALQLIYALSTGVVWVMQMLRFFVYGACVGVCFIPHWWWYLTSPNIIRRVSYRSSEKTKRRNILRVLEAEGVDLREVLCKDSIAQATQPSQQMQLPPSPATAAAAARRRRRLATVAGAGQQDGAARDCSDSLPHTVDGEVDDRSLSQLHNPSPFSTLRCWEASGSGYDQRTPLGLSSEPLGRDSDSYDEASFVSSSSQRRRRRPTPSRSALTRPCHGGTEASTSGPPGATALERLMGAVTCNLNPADGSAMRSLPLRRRQQSQPQRPIIEDAAAHRSREPEEGIERRQDAHNGPSVTATARAKAHSSSSSSGGTETQPRKPRRDATGDEAAVCRAAPEDSTEEQMNGCRLRGSPQRVQGYEGRPVHYKTLPKVNPSSDPMLRDVLAAFHEAEASDVTVGLSQAGHPSGPHSRRQPGGAAARRPRRRSGAPPPQRRGKAAHEPRAQPQHKPRARTFSEENLFAELDEEDEEDRMNLHNRATVDIVLPAPLDAIMKTLEYTQQSKRLRRKRFPIVIDVSGVAWIIGSHLWSTMIARVLAQRGYVVFCPDYRNFPQTTMEGMTLDVSDAIAWVLNNAERYNGDLNNVTLIGQSAGAHLTMMSLLSQAQLSAYRHNAEKGIHEGVPPPSDVAYNVPRYNPRESIHRYVGLSGMYNIEGLVDHFQAAGLTTPVLYQIAGGRDQLARYTLNAYFDDRRGGDTGEVLPDNIFDFFPQRMFFVHGDADKSAPVTESASLVGMMRAAQERYTLRRSARNEEARRHAQRSRRLLPGALAAAAGEVKSSSAATAAGVFPSPLTGLPSRRATVVDFDTVDSAAAATAAEQAVGAAVRLADNQEIIFVHSKDLVDTGAAPNAAQQQQYSYGTGAPRASILSPTKISPIIPPSREDRPQPPVELGFLVIPGGRHSDAFVDECIAAGRSCCVDFLCDYESTIDFQGNALEPGSHGPNAEGASGNSLGDSVWTSSLPEADKAPLSWAHAPEMSVMPDAVLPLAVPYEDRSLPLRLCTMICPF

Target ORF information:

RefSeq Version	XM_001464339.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001464339.1

ORF Insert Sequence:

ATGTTGCCCT ACGCTATTCG GCAGATTGTA TGGATGCTCA CCAGTGCCCT GCAGCTGATC 
TACGCGCTCA GCACAGGGGT GGTGTGGGTG ATGCAGATGC TGCGGTTTTT CGTCTACGGC 
GCCTGCGTTG GGGTGTGCTT TATCCCACAC TGGTGGTGGT ACCTGACTTC GCCCAACATC 
ATTCGCCGCG TGTCGTACCG CTCCTCCGAG AAGACGAAGC GGCGCAATAT CTTGCGCGTG 
CTGGAGGCAG AGGGGGTCGA CCTGCGTGAG GTGCTGTGCA AGGACTCCAT CGCGCAAGCA 
ACGCAGCCAT CACAGCAGAT GCAGCTACCA CCATCCCCAG CCACTGCAGC GGCGGCGGCG 
CGTCGTCGAC GTCGTCTAGC GACTGTGGCT GGCGCCGGGC AGCAGGATGG AGCAGCAAGA 
GACTGCAGTG ACAGCCTGCC CCACACGGTC GACGGCGAAG TCGATGATCG TTCTCTCTCC 
CAGCTGCATA ACCCCTCCCC CTTCTCCACT CTGCGATGCT GGGAAGCCTC TGGCAGCGGG 
TATGACCAAC GCACGCCGCT TGGCCTCAGC AGCGAGCCTT TAGGCCGTGA CTCCGACAGC 
TACGATGAGG CCAGCTTCGT TTCCTCGTCT TCGCAGCGCC GCCGCCGCCG CCCAACACCA 
TCTCGCTCGG CGCTGACTAG ACCATGTCAC GGCGGCACCG AAGCCTCCAC GAGCGGCCCG 
CCCGGCGCCA CGGCGCTTGA GCGACTGATG GGCGCCGTCA CGTGCAACCT AAACCCGGCT 
GACGGCTCCG CCATGCGTAG CTTGCCGCTG CGACGGCGCC AGCAGTCCCA ACCTCAGCGG 
CCCATCATCG AAGACGCCGC TGCGCACCGC TCGCGCGAGC CGGAAGAAGG CATCGAGCGG 
CGGCAGGATG CTCACAACGG CCCTTCCGTG ACTGCCACGG CACGCGCCAA GGCACACAGC 
AGCTCGTCAT CAAGCGGTGG AACAGAAACC CAGCCTCGCA AGCCTCGGCG TGATGCCACA 
GGCGACGAGG CTGCCGTCTG CCGCGCAGCA CCGGAGGACA GCACGGAAGA GCAGATGAAC 
GGCTGCAGAC TTCGCGGCAG CCCGCAGCGC GTGCAGGGGT ACGAAGGCCG CCCTGTGCAC 
TACAAGACGC TGCCCAAGGT GAACCCCTCG AGCGATCCGA TGCTGCGAGA TGTGCTTGCC 
GCCTTTCACG AGGCGGAGGC GTCGGACGTG ACGGTGGGGC TCTCACAAGC TGGCCACCCG 
TCAGGGCCGC ATTCGCGACG CCAGCCCGGC GGCGCGGCGG CGAGGCGGCC GCGTCGGCGA 
AGTGGAGCGC CGCCGCCACA GCGCCGGGGG AAAGCTGCTC ACGAGCCGCG TGCGCAACCG 
CAACACAAGC CGCGCGCCCG CACGTTCTCC GAAGAAAACC TCTTTGCCGA ACTTGACGAG 
GAGGACGAGG AGGATCGCAT GAACCTGCAC AACCGCGCTA CCGTCGACAT TGTCCTGCCG 
GCGCCGCTGG ACGCCATCAT GAAGACGCTC GAGTACACCC AGCAGAGCAA GCGGCTGCGC 
CGCAAGCGCT TTCCTATTGT AATCGACGTC TCGGGGGTGG CATGGATCAT CGGCAGCCAC 
CTCTGGAGCA CCATGATAGC GCGGGTGCTG GCACAGCGCG GTTACGTTGT CTTCTGCCCC 
GACTACCGCA ACTTCCCGCA GACGACGATG GAGGGCATGA CGCTGGACGT CTCGGACGCC 
ATCGCGTGGG TGCTGAACAA CGCGGAGCGC TACAACGGCG ACCTGAACAA TGTGACGCTG 
ATTGGGCAGT CCGCCGGTGC GCACCTGACG ATGATGTCGC TGCTGTCGCA GGCGCAGCTC 
TCCGCGTACC GGCACAACGC CGAGAAGGGC ATCCACGAAG GCGTTCCACC GCCGTCGGAC 
GTCGCCTACA ACGTCCCCCG CTACAACCCG CGTGAGTCGA TCCACCGCTA CGTCGGCCTC 
AGCGGCATGT ACAATATCGA GGGTCTCGTG GACCACTTCC AGGCCGCGGG TCTCACCACC 
CCGGTGCTGT ACCAGATCGC CGGCGGCCGG GACCAGCTAG CGCGCTACAC GCTGAACGCG 
TACTTCGACG ACCGCCGCGG CGGCGACACG GGCGAGGTGC TGCCGGACAA CATTTTTGAC 
TTTTTCCCAC AGCGCATGTT CTTTGTGCAC GGCGACGCGG ACAAGAGCGC GCCCGTCACG 
GAGAGCGCGT CCCTTGTCGG AATGATGCGG GCGGCGCAGG AGCGCTACAC GCTGAGGCGC 
AGTGCACGCA ACGAGGAGGC GCGGCGTCAC GCACAACGCA GTCGTCGTTT GTTGCCGGGT 
GCCTTGGCTG CCGCCGCCGG TGAAGTGAAG AGCAGCAGTG CGGCCACAGC GGCCGGTGTC 
TTCCCAAGTC CATTGACGGG ATTGCCGTCG CGGCGTGCGA CGGTGGTGGA CTTCGATACG 
GTGGACTCAG CAGCAGCCGC GACGGCTGCC GAGCAGGCGG TTGGCGCGGC CGTGAGGTTG 
GCCGACAATC AAGAGATCAT CTTCGTCCAC AGTAAGGACC TTGTCGATAC CGGTGCAGCA 
CCGAACGCGG CTCAGCAGCA GCAGTACTCC TACGGGACAG GAGCGCCTCG TGCTTCGATT 
CTGTCGCCGA CGAAGATCAG CCCCATCATT CCACCCTCAC GCGAGGACCG TCCTCAGCCG 
CCGGTGGAGC TTGGCTTTCT CGTCATCCCT GGCGGTCGAC ACTCGGACGC CTTCGTGGAT 
GAATGCATCG CCGCGGGTCG CAGCTGCTGC GTTGACTTTT TGTGCGACTA CGAGTCGACG 
ATCGACTTCC AAGGCAACGC CTTAGAGCCG GGCTCGCACG GGCCCAACGC CGAGGGCGCC 
AGTGGGAACT CCCTCGGCGA CTCGGTGTGG ACCTCATCCT TGCCGGAGGC GGACAAGGCG 
CCACTCTCAT GGGCGCATGC GCCAGAGATG AGTGTGATGC CTGACGCGGT GCTGCCGCTT 
GCCGTGCCCT ACGAAGATCG CTCGCTGCCA CTGCGACTGT GCACAATGAT CTGTCCATTC 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_15_0380 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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