Gene Symbol | Atp6v0b |
Entrez Gene ID | 114143 |
Full Name | ATPase, H+ transporting, lysosomal V0 subunit B |
Synonyms | 2310024H13Rik,Atp6f,VMA16 |
General protein information |
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Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Atp6v0b cDNA ORF clone
gRNAs
Gene Symbol | Atp6v0b |
Entrez Gene ID | 114143 |
Full Name | ATPase, H+ transporting, lysosomal V0 subunit B |
Synonyms | 2310024H13Rik,Atp6f,VMA16 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_033617.3 | NP_291095.1 | V-type proton ATPase 21 kDa proteolipid subunit |
XM_030253094.1 | XP_030108954.1 | V-type proton ATPase 21 kDa proteolipid subunit isoform X1 |
XM_030253095.1 | XP_030108955.1 | V-type proton ATPase 21 kDa proteolipid subunit isoform X1 |
Homo sapiens (human) | ATP6V0B | NP_004038.1 |
Pan troglodytes (chimpanzee) | ATP6V0B | XP_003308092.1 |
ATP6V0B | XP_001097275.1 | |
Bos taurus (cattle) | ATP6V0B | NP_001033127.1 |
Rattus norvegicus (Norway rat) | Atp6v0b | NP_001100151.1 |
Drosophila melanogaster (fruit fly) | VhaPPA1-1 | NP_001247111.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_06108 | XP_003711974.1 |
Arabidopsis thaliana (thale cress) | AT4G32530 | NP_001119099.1 |
Gallus gallus (chicken) | ATP6V0B | NP_001264501.1 |
Caenorhabditis elegans (roundworm) | vha-4 | NP_495659.1 |
Canis lupus familiaris (dog) | ATP6V0B | XP_539645.2 |
Mus musculus (house mouse) | Atp6v0b | NP_291095.1 |
Saccharomyces cerevisiae (baker's yeast) | VMA16 | NP_011891.1 |
Schizosaccharomyces pombe (fission yeast) | vma16 | NP_594516.1 |
Xenopus tropicalis (tropical clawed frog) | atp6v0b | NP_001017064.1 |
Danio rerio (zebrafish) | atp6v0b | NP_955855.1 |
Neurospora crassa | NCU09747 | XP_964449.1 |
Oryza sativa (rice) | Os01g0610100 | NP_001043542.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP009334 | XP_310004.2 |
Kluyveromyces lactis | KLLA0E11529g | XP_454470.1 |
Eremothecium gossypii | AGOS_ACR071W | NP_983473.1 |
Arabidopsis thaliana (thale cress) | AT2G25610 | NP_180132.1 |
Defects in whirlin, a PDZ domain molecule involved in stereocilia elongation, cause deafness in the whirler mouse and families with DFNB31.
Mburu P, Mustapha M, Varela A, Weil D, El-Amraoui A, Holme RH, Rump A, Hardisty RE, Blanchard S, Coimbra RS, Perfettini I, Parkinson N, Mallon AM, Glenister P, Rogers MJ, Paige AJ, Moir L, Clay J, Rosenthal A, Liu XZ, Blanco G, Steel KP, Petit C, Brown SD
Nature genetics34(4)421-8(2003 Aug)
Expression and localization of the mouse homologue of the yeast V-ATPase 21-kDa Subunit c" (Vma16p).
Nishi T, Kawasaki-Nishi S, Forgac M
The Journal of biological chemistry276(36)34122-30(2001 Sep)
Mouse Atp6f, the gene encoding the 23-kDa proteolipid of vacuolar proton translocating ATPase.
Sun-Wada GH, Murakami H, Nakai H, Wada Y, Futai M
Gene274(1-2)93-9(2001 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Atp6v0b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Atp6v0b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu08960 | |
Clone ID Related Accession (Same CDS sequence) | NM_033617.3 | |
Accession Version | NM_033617.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 618bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-02 | |
Organism | Mus musculus(house mouse) | |
Product | V-type proton ATPase 21 kDa proteolipid subunit | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL627128.16. On May 1, 2007 this sequence version replaced NM_033617.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC009169.1, AF356006.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGACGGGGC TGGAGTTGCT CTACCTCGGG ATCTTTGTGG CCTTCTGGGC CTGCATGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_291095.1 |
CDS | 94..711 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACGGGGC TGGAGTTGCT CTACCTCGGG ATCTTTGTGG CCTTCTGGGC CTGCATGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu88390 | |
Clone ID Related Accession (Same CDS sequence) | XM_030253094.1 , XM_030253095.1 | |
Accession Version | XM_030253094.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 477bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | V-type proton ATPase 21 kDa proteolipid subunit isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000070.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGGTCGA ATCTGGGCAT TGGCCTAGCA ATTTCTCTGT CTGTGGTTGG AGCAGCCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030108954.1 |
CDS | 644..1120 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTGGTCGA ATCTGGGCAT TGGCCTAGCA ATTTCTCTGT CTGTGGTTGG AGCAGCCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu88390 | |
Clone ID Related Accession (Same CDS sequence) | XM_030253094.1 , XM_030253095.1 | |
Accession Version | XM_030253095.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 477bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | V-type proton ATPase 21 kDa proteolipid subunit isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000070.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGGTCGA ATCTGGGCAT TGGCCTAGCA ATTTCTCTGT CTGTGGTTGG AGCAGCCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030108955.1 |
CDS | 295..771 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTGGTCGA ATCTGGGCAT TGGCCTAGCA ATTTCTCTGT CTGTGGTTGG AGCAGCCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Defects in whirlin, a PDZ domain molecule involved in stereocilia elongation, cause deafness in the whirler mouse and families with DFNB31. |
Expression and localization of the mouse homologue of the yeast V-ATPase 21-kDa Subunit c" (Vma16p). |
Mouse Atp6f, the gene encoding the 23-kDa proteolipid of vacuolar proton translocating ATPase. |