Mus musculus (house mouse) |
Efna3 |
NP_034238.1 |
Canis lupus familiaris (dog) |
EFNA3 |
XP_003639199.1 |
Bos taurus (cattle) |
EFNA3 |
NP_001098899.1 |
Rattus norvegicus (Norway rat) |
Efna3 |
XP_574979.4 |
Pan troglodytes (chimpanzee) |
EFNA3 |
XP_003308464.1 |
|
EFNA3 |
XP_001115043.1 |
Homo sapiens (human) |
EFNA3 |
NP_004943.1 |
Related articles in PubMed
Desipramine targets astrocytes to attenuate synaptic plasticity via modulation of the ephrinA3/EphA4 signalling.
Tanasic S, Mattusch C, Wagner EM, Eder M, Rupprecht R, Rammes G, Di Benedetto B
Neuropharmacology105154-163(2016 06)
Proper closure of the optic fissure requires ephrin A5-EphB2-JNK signaling.
Noh H, Lee H, Park E, Park S
Development (Cambridge, England)143(3)461-72(2016 Feb)
Ephrin Ligands and Eph Receptors Show Regionally Restricted Expression in the Developing Palate and Tongue.
Xavier GM, Miletich I, Cobourne MT
Frontiers in physiology760(2016)
Ephrin-A3 promotes and maintains slow muscle fiber identity during postnatal development and reinnervation.
Stark DA, Coffey NJ, Pancoast HR, Arnold LL, Walker JP, Vall?e J, Robitaille R, Garcia ML, Cornelison DD
The Journal of cell biology211(5)1077-91(2015 Dec)
Quantitative assessment of computational models for retinotopic map formation.
Hjorth JJ, Sterratt DC, Cutts CS, Willshaw DJ, Eglen SJ
Developmental neurobiology75(6)641-66(2015 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Efna3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Efna3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OMu14609 |
Clone ID Related Accession (Same CDS sequence) |
NM_010108.2
, NM_010108.1
|
Accession Version |
NM_010108.1 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 693bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-02-16 |
Organism |
Mus musculus(house mouse) |
Product |
ephrin-A3 precursor |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC125003.1. On or before Nov 14, 2006 this sequence version replaced XM_892839.2, XM_910035.2, XM_988846.1.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BC107002.2, SRR1660815.355694.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN01164139 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC TCCACATCGC ACTCCGGGGA GAAGCCGGTC CCCACTCTCC CCCAGTTCAC CATGGGCCCC AATGTGAAGA TCAACGTGTT GGAAGACTTT GAGGGAGAGA ATCCCCAGGT GCCCAAGCTT GAGAAGAGCA TCAGTGGGAC CAGCCCCAAG CGGGAACACC TGCCTCTGGC CGTGGGCATC GCCTTCTTCC TCATGACGCT CTTGGCCTCC TAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_034238.1 |
CDS | 47..739 |
Translation | |
Target ORF information:
RefSeq Version | NM_010108.1 |
Organism | Mus musculus(house mouse) |
Definition | Mus musculus ephrin A3 (Efna3), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_010108.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC TCCACATCGC ACTCCGGGGA GAAGCCGGTC CCCACTCTCC CCCAGTTCAC CATGGGCCCC AATGTGAAGA TCAACGTGTT GGAAGACTTT GAGGGAGAGA ATCCCCAGGT GCCCAAGCTT GAGAAGAGCA TCAGTGGGAC CAGCCCCAAG CGGGAACACC TGCCTCTGGC CGTGGGCATC GCCTTCTTCC TCATGACGCT CTTGGCCTCC TAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OMu31616 |
Clone ID Related Accession (Same CDS sequence) |
NM_001377116.1
, XM_006500988.2
|
Accession Version |
XM_006500988.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 615bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-21 |
Organism |
Mus musculus(house mouse) |
Product |
ephrin-A3 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000069.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Feb 9, 2015 this sequence version replaced XM_006500988.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Mus musculus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601
| ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC TCCAAAGACT TTGAGGGAGA GAATCCCCAG GTGCCCAAGC TTGAGAAGAG CATCAGTGGG ACCAGCCCCA AGCGGGAACA CCTGCCTCTG GCCGTGGGCA TCGCCTTCTT CCTCATGACG CTCTTGGCCT CCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_006501051.1 |
CDS | 128..742 |
Translation | |
Target ORF information:
RefSeq Version | XM_006500988.2 |
Organism | Mus musculus(house mouse) |
Definition | Mus musculus ephrin A3 (Efna3), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_006500988.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601
| ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC TCCAAAGACT TTGAGGGAGA GAATCCCCAG GTGCCCAAGC TTGAGAAGAG CATCAGTGGG ACCAGCCCCA AGCGGGAACA CCTGCCTCTG GCCGTGGGCA TCGCCTTCTT CCTCATGACG CTCTTGGCCT CCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OMu80548 |
Clone ID Related Accession (Same CDS sequence) |
NM_001377119.1
, XM_017319452.1
, NM_001377117.1
, NM_001377118.1
|
Accession Version |
XM_017319452.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 450bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-21 |
Organism |
Mus musculus(house mouse) |
Product |
ephrin-A3 isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000069.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Mus musculus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421
| ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC TTCTTCCTCA TGACGCTCTT GGCCTCCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_017174941.1 |
CDS | 295..744 |
Translation | |
Target ORF information:
RefSeq Version | XM_017319452.1 |
Organism | Mus musculus(house mouse) |
Definition | Mus musculus ephrin A3 (Efna3), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_017319452.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421
| ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC TTCTTCCTCA TGACGCTCTT GGCCTCCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OMu14609 |
Clone ID Related Accession (Same CDS sequence) |
NM_010108.2
, NM_010108.1
|
Accession Version |
NM_010108.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 693bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-12 |
Organism |
Mus musculus(house mouse) |
Product |
ephrin-A3 isoform a precursor |
Comment |
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC171273.1 and AC132327.3. On Dec 13, 2019 this sequence version replaced NM_010108.1.
Transcript Variant: This variant (1) encodes the longest isoform (a).
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR7652917.740345.1, SRR7345562.658780.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN01164139 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: full length.
|
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC TCCACATCGC ACTCCGGGGA GAAGCCGGTC CCCACTCTCC CCCAGTTCAC CATGGGCCCC AATGTGAAGA TCAACGTGTT GGAAGACTTT GAGGGAGAGA ATCCCCAGGT GCCCAAGCTT GAGAAGAGCA TCAGTGGGAC CAGCCCCAAG CGGGAACACC TGCCTCTGGC CGTGGGCATC GCCTTCTTCC TCATGACGCT CTTGGCCTCC TAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_034238.1 |
CDS | 107..799 |
Translation | |
Target ORF information:
RefSeq Version | NM_010108.2 |
Organism | Mus musculus(house mouse) |
Definition | Mus musculus ephrin A3 (Efna3), transcript variant 1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_010108.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661
| ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC TCCACATCGC ACTCCGGGGA GAAGCCGGTC CCCACTCTCC CCCAGTTCAC CATGGGCCCC AATGTGAAGA TCAACGTGTT GGAAGACTTT GAGGGAGAGA ATCCCCAGGT GCCCAAGCTT GAGAAGAGCA TCAGTGGGAC CAGCCCCAAG CGGGAACACC TGCCTCTGGC CGTGGGCATC GCCTTCTTCC TCATGACGCT CTTGGCCTCC TAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OMu31616 |
Clone ID Related Accession (Same CDS sequence) |
NM_001377116.1
, XM_006500988.2
|
Accession Version |
NM_001377116.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 615bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-12 |
Organism |
Mus musculus(house mouse) |
Product |
ephrin-A3 isoform b precursor |
Comment |
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC171273.1 and AC132327.3. On Dec 13, 2019 this sequence version replaced XM_006500988.3.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR7345562.3683927.1, ERR2680377.1080161.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN01164139, SAMN01164141 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: full length.
|
1 61 121 181 241 301 361 421 481 541 601
| ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC TCCAAAGACT TTGAGGGAGA GAATCCCCAG GTGCCCAAGC TTGAGAAGAG CATCAGTGGG ACCAGCCCCA AGCGGGAACA CCTGCCTCTG GCCGTGGGCA TCGCCTTCTT CCTCATGACG CTCTTGGCCT CCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001364045.1 |
CDS | 107..721 |
Translation | |
Target ORF information:
RefSeq Version | NM_001377116.1 |
Organism | Mus musculus(house mouse) |
Definition | Mus musculus ephrin A3 (Efna3), transcript variant 2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001377116.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601
| ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC TCCAAAGACT TTGAGGGAGA GAATCCCCAG GTGCCCAAGC TTGAGAAGAG CATCAGTGGG ACCAGCCCCA AGCGGGAACA CCTGCCTCTG GCCGTGGGCA TCGCCTTCTT CCTCATGACG CTCTTGGCCT CCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OMu80548 |
Clone ID Related Accession (Same CDS sequence) |
NM_001377119.1
, XM_017319452.1
, NM_001377117.1
, NM_001377118.1
|
Accession Version |
NM_001377119.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 450bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-12 |
Organism |
Mus musculus(house mouse) |
Product |
ephrin-A3 isoform c |
Comment |
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC171273.1 and AC132327.3.
Transcript Variant: This variant (5), as well as variants 3 and 4, encodes isoform c.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
CDS exon combination :: SRR7345562.2899315.1, ERR2680377.135134.1 [ECO:0000331]
RNAseq introns :: single sample supports all introns SAMN01164139 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: full length.
|
1 61 121 181 241 301 361 421
| ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC TTCTTCCTCA TGACGCTCTT GGCCTCCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001364048.1 |
CDS | 324..773 |
Translation | |
Target ORF information:
RefSeq Version | NM_001377119.1 |
Organism | Mus musculus(house mouse) |
Definition | Mus musculus ephrin A3 (Efna3), transcript variant 5, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001377119.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421
| ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC TTCTTCCTCA TGACGCTCTT GGCCTCCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OMu80548 |
Clone ID Related Accession (Same CDS sequence) |
NM_001377119.1
, XM_017319452.1
, NM_001377117.1
, NM_001377118.1
|
Accession Version |
NM_001377117.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 450bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-12 |
Organism |
Mus musculus(house mouse) |
Product |
ephrin-A3 isoform c |
Comment |
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC171273.1 and AC132327.3. On Dec 13, 2019 this sequence version replaced XM_017319452.2.
Transcript Variant: This variant (3), as well as variants 4 and 5, encodes isoform c.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR1660815.505298.1, SRR7345560.988858.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN01164139 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: full length.
|
1 61 121 181 241 301 361 421
| ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC TTCTTCCTCA TGACGCTCTT GGCCTCCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001364046.1 |
CDS | 374..823 |
Translation | |
Target ORF information:
RefSeq Version | NM_001377117.1 |
Organism | Mus musculus(house mouse) |
Definition | Mus musculus ephrin A3 (Efna3), transcript variant 3, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001377117.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421
| ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC TTCTTCCTCA TGACGCTCTT GGCCTCCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OMu80548 |
Clone ID Related Accession (Same CDS sequence) |
NM_001377119.1
, XM_017319452.1
, NM_001377117.1
, NM_001377118.1
|
Accession Version |
NM_001377118.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 450bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-14 |
Organism |
Mus musculus(house mouse) |
Product |
ephrin-A3 isoform c |
Comment |
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC171273.1 and AC132327.3. On Dec 15, 2019 this sequence version replaced XM_030252414.1.
Transcript Variant: This variant (4), as well as variants 3 and 5, encodes isoform c.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR7345562.903724.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN01164139 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: full length.
|
1 61 121 181 241 301 361 421
| ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC TTCTTCCTCA TGACGCTCTT GGCCTCCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001364047.1 |
CDS | 850..1299 |
Translation | |
Target ORF information:
RefSeq Version | NM_001377118.1 |
Organism | Mus musculus(house mouse) |
Definition | Mus musculus ephrin A3 (Efna3), transcript variant 4, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001377118.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421
| ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC TTCTTCCTCA TGACGCTCTT GGCCTCCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OMu90679 |
Clone ID Related Accession (Same CDS sequence) |
NM_001377121.1
, NM_001377120.1
|
Accession Version |
NM_001377121.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 372bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-12 |
Organism |
Mus musculus(house mouse) |
Product |
ephrin-A3 isoform d |
Comment |
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC171273.1 and AC132327.3.
Transcript Variant: This variant (7), as well as variant 6, encodes isoform d.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR7345562.2005783.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN01164139, SAMN01164141 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
|
1 61 121 181 241 301 361
| ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC AAAGACTTTG AGGGAGAGAA TCCCCAGGTG CCCAAGCTTG AGAAGAGCAT CAGTGGGACC AGCCCCAAGC GGGAACACCT GCCTCTGGCC GTGGGCATCG CCTTCTTCCT CATGACGCTC TTGGCCTCCT AG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001364050.1 |
CDS | 324..695 |
Translation | |
Target ORF information:
RefSeq Version | NM_001377121.1 |
Organism | Mus musculus(house mouse) |
Definition | Mus musculus ephrin A3 (Efna3), transcript variant 7, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001377121.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361
| ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC AAAGACTTTG AGGGAGAGAA TCCCCAGGTG CCCAAGCTTG AGAAGAGCAT CAGTGGGACC AGCCCCAAGC GGGAACACCT GCCTCTGGCC GTGGGCATCG CCTTCTTCCT CATGACGCTC TTGGCCTCCT AG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OMu90679 |
Clone ID Related Accession (Same CDS sequence) |
NM_001377121.1
, NM_001377120.1
|
Accession Version |
NM_001377120.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 372bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-12 |
Organism |
Mus musculus(house mouse) |
Product |
ephrin-A3 isoform d |
Comment |
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC171273.1 and AC132327.3. On Dec 13, 2019 this sequence version replaced XM_030252415.1.
Transcript Variant: This variant (6), as well as variant 7, encodes isoform d.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR7345562.4138462.1, ERR2680377.548342.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN01164139, SAMN01164141 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
|
1 61 121 181 241 301 361
| ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC AAAGACTTTG AGGGAGAGAA TCCCCAGGTG CCCAAGCTTG AGAAGAGCAT CAGTGGGACC AGCCCCAAGC GGGAACACCT GCCTCTGGCC GTGGGCATCG CCTTCTTCCT CATGACGCTC TTGGCCTCCT AG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001364049.1 |
CDS | 850..1221 |
Translation | |
Target ORF information:
RefSeq Version | NM_001377120.1 |
Organism | Mus musculus(house mouse) |
Definition | Mus musculus ephrin A3 (Efna3), transcript variant 6, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001377120.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361
| ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC AAAGACTTTG AGGGAGAGAA TCCCCAGGTG CCCAAGCTTG AGAAGAGCAT CAGTGGGACC AGCCCCAAGC GGGAACACCT GCCTCTGGCC GTGGGCATCG CCTTCTTCCT CATGACGCTC TTGGCCTCCT AG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.