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Efna3 cDNA ORF clone, Mus musculus(house mouse)

Summary

Gene Symbol Efna3
Entrez Gene ID 13638
Full Name ephrin A3
Synonyms AW494418,EFL-2,Ehk1-L,Epl3,LERK-3
General protein information
Preferred Names

ephrin A3

Names

ephrin-A3
EHK1 ligand
EPH-related receptor tyrosine kinase ligand 3
Gene Type protein-coding
Organism Mus musculus(house mouse)
Genome

3

3 F1|3 39.06 cM

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001377119.1 NP_001364048.1 ephrin-A3 isoform c
NM_001377116.1 NP_001364045.1 ephrin-A3 isoform b precursor
NM_010108.2 NP_034238.1 ephrin-A3 isoform a precursor
XM_017319452.1 XP_017174941.1 ephrin-A3 isoform X2
NM_001377117.1 NP_001364046.1 ephrin-A3 isoform c
NM_001377121.1 NP_001364050.1 ephrin-A3 isoform d
XM_006500988.2 XP_006501051.1 ephrin-A3 isoform X1
NM_010108.1 NP_034238.1 ephrin-A3 precursor
NM_001377120.1 NP_001364049.1 ephrin-A3 isoform d
NM_001377118.1 NP_001364047.1 ephrin-A3 isoform c

Pathways from BioSystems


Homologies


Mus musculus (house mouse) Efna3 NP_034238.1
Canis lupus familiaris (dog) EFNA3 XP_003639199.1
Bos taurus (cattle) EFNA3 NP_001098899.1
Rattus norvegicus (Norway rat) Efna3 XP_574979.4
Pan troglodytes (chimpanzee) EFNA3 XP_003308464.1
EFNA3 XP_001115043.1
Homo sapiens (human) EFNA3 NP_004943.1

Gene Ontology


Bibliography

Related articles in PubMed

Desipramine targets astrocytes to attenuate synaptic plasticity via modulation of the ephrinA3/EphA4 signalling.
Tanasic S, Mattusch C, Wagner EM, Eder M, Rupprecht R, Rammes G, Di Benedetto B
Neuropharmacology105154-163(2016 06)

Proper closure of the optic fissure requires ephrin A5-EphB2-JNK signaling.
Noh H, Lee H, Park E, Park S
Development (Cambridge, England)143(3)461-72(2016 Feb)

Ephrin Ligands and Eph Receptors Show Regionally Restricted Expression in the Developing Palate and Tongue.
Xavier GM, Miletich I, Cobourne MT
Frontiers in physiology760(2016)

Ephrin-A3 promotes and maintains slow muscle fiber identity during postnatal development and reinnervation.
Stark DA, Coffey NJ, Pancoast HR, Arnold LL, Walker JP, Vall?e J, Robitaille R, Garcia ML, Cornelison DD
The Journal of cell biology211(5)1077-91(2015 Dec)

Quantitative assessment of computational models for retinotopic map formation.
Hjorth JJ, Sterratt DC, Cutts CS, Willshaw DJ, Eglen SJ
Developmental neurobiology75(6)641-66(2015 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Findings suggest a putative novel mechanism for desipramine to modulate long-term potentiation through the regulation of the ephrinA3/EphA4 signaling pathway
Title: Desipramine targets astrocytes to attenuate synaptic plasticity via modulation of the ephrinA3/EphA4 signalling.

The ephrin-A2/-A3 DKO mice have utility as a novel ASD model with an emphasis on sensory abnormalities and restricted, repetitive behavioral symptoms.
Title: Repetitive grooming and sensorimotor abnormalities in an ephrin-A knockout model for Autism Spectrum Disorders.

Ephrin-A2 and -A3 are negative regulators of the proliferative and neurogenic potentials of Muller cells.
Title: Ephrin-A2 and -A3 are negative regulators of the regenerative potential of M?ller cells.

Ephrin-A3 suppresses Wnt signaling to control retinal stem cell potency.
Title: Ephrin-A3 suppresses Wnt signaling to control retinal stem cell potency.

Data show that a number of Eph receptors and ephrins were expressed in hematopoietic stem cells.
Title: Activation of ephrin A proteins influences hematopoietic stem cell adhesion and trafficking patterns.

The following Efna3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Efna3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMu31616 XM_006500988.2
Latest version!		 Mus musculus ephrin A3 (Efna3), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $139.30
$199.00
OMu80548 XM_017319452.1
Latest version!		 Mus musculus ephrin A3 (Efna3), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OMu14609 NM_010108.2
Latest version!		 Mus musculus ephrin A3 (Efna3), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $139.30
$199.00
OMu31616 NM_001377116.1
Latest version!		 Mus musculus ephrin A3 (Efna3), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $139.30
$199.00
OMu80548 NM_001377118.1
Latest version!		 Mus musculus ephrin A3 (Efna3), transcript variant 4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $69.30
$99.00
OMu80548 NM_001377117.1
Latest version!		 Mus musculus ephrin A3 (Efna3), transcript variant 3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $69.30
$99.00
OMu80548 NM_001377119.1
Latest version!		 Mus musculus ephrin A3 (Efna3), transcript variant 5, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $69.30
$99.00
OMu90679 NM_001377121.1
Latest version!		 Mus musculus ephrin A3 (Efna3), transcript variant 7, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $69.30
$99.00
OMu90679 NM_001377120.1
Latest version!		 Mus musculus ephrin A3 (Efna3), transcript variant 6, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $69.30
$99.00
View Old Accession Versions >>
OMu14609 NM_010108.1 Mus musculus ephrin A3 (Efna3), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $188.30
$269.00
Hide Old Accession Versions >>

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OMu14609
Clone ID Related Accession (Same CDS sequence) NM_010108.2 , NM_010108.1
Accession Version NM_010108.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 693bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-02-16
Organism Mus musculus(house mouse)
Product ephrin-A3 precursor
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC125003.1. On or before Nov 14, 2006 this sequence version replaced XM_892839.2, XM_910035.2, XM_988846.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC107002.2, SRR1660815.355694.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164139 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG 
CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC 
AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT 
ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG 
TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG 
GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT 
TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC 
ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC 
TCCACATCGC ACTCCGGGGA GAAGCCGGTC CCCACTCTCC CCCAGTTCAC CATGGGCCCC 
AATGTGAAGA TCAACGTGTT GGAAGACTTT GAGGGAGAGA ATCCCCAGGT GCCCAAGCTT 
GAGAAGAGCA TCAGTGGGAC CAGCCCCAAG CGGGAACACC TGCCTCTGGC CGTGGGCATC 
GCCTTCTTCC TCATGACGCT CTTGGCCTCC TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_034238.1
CDS47..739
Translation

Target ORF information:

RefSeq Version NM_010108.1
Organism Mus musculus(house mouse)
Definition Mus musculus ephrin A3 (Efna3), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_010108.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG 
CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC 
AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT 
ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG 
TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG 
GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT 
TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC 
ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC 
TCCACATCGC ACTCCGGGGA GAAGCCGGTC CCCACTCTCC CCCAGTTCAC CATGGGCCCC 
AATGTGAAGA TCAACGTGTT GGAAGACTTT GAGGGAGAGA ATCCCCAGGT GCCCAAGCTT 
GAGAAGAGCA TCAGTGGGAC CAGCCCCAAG CGGGAACACC TGCCTCTGGC CGTGGGCATC 
GCCTTCTTCC TCATGACGCT CTTGGCCTCC TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu31616
Clone ID Related Accession (Same CDS sequence) NM_001377116.1 , XM_006500988.2
Accession Version XM_006500988.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 615bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-21
Organism Mus musculus(house mouse)
Product ephrin-A3 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000069.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006500988.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG 
CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC 
AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT 
ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG 
TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG 
GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT 
TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC 
ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC 
TCCAAAGACT TTGAGGGAGA GAATCCCCAG GTGCCCAAGC TTGAGAAGAG CATCAGTGGG 
ACCAGCCCCA AGCGGGAACA CCTGCCTCTG GCCGTGGGCA TCGCCTTCTT CCTCATGACG 
CTCTTGGCCT CCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006501051.1
CDS128..742
Translation

Target ORF information:

RefSeq Version XM_006500988.2
Organism Mus musculus(house mouse)
Definition Mus musculus ephrin A3 (Efna3), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006500988.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG 
CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC 
AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT 
ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG 
TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG 
GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT 
TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC 
ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC 
TCCAAAGACT TTGAGGGAGA GAATCCCCAG GTGCCCAAGC TTGAGAAGAG CATCAGTGGG 
ACCAGCCCCA AGCGGGAACA CCTGCCTCTG GCCGTGGGCA TCGCCTTCTT CCTCATGACG 
CTCTTGGCCT CCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu80548
Clone ID Related Accession (Same CDS sequence) NM_001377119.1 , XM_017319452.1 , NM_001377117.1 , NM_001377118.1
Accession Version XM_017319452.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 450bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-21
Organism Mus musculus(house mouse)
Product ephrin-A3 isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000069.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA 
TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC 
AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG 
CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC 
ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT 
GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG 
AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC 
TTCTTCCTCA TGACGCTCTT GGCCTCCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017174941.1
CDS295..744
Translation

Target ORF information:

RefSeq Version XM_017319452.1
Organism Mus musculus(house mouse)
Definition Mus musculus ephrin A3 (Efna3), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017319452.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA 
TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC 
AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG 
CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC 
ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT 
GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG 
AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC 
TTCTTCCTCA TGACGCTCTT GGCCTCCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu14609
Clone ID Related Accession (Same CDS sequence) NM_010108.2 , NM_010108.1
Accession Version NM_010108.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 693bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-12
Organism Mus musculus(house mouse)
Product ephrin-A3 isoform a precursor
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC171273.1 and AC132327.3. On Dec 13, 2019 this sequence version replaced NM_010108.1. Transcript Variant: This variant (1) encodes the longest isoform (a). Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR7652917.740345.1, SRR7345562.658780.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164139 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: full length. 

1
61
121
181
241
301
361
421
481
541
601
661
ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG 
CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC 
AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT 
ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG 
TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG 
GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT 
TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC 
ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC 
TCCACATCGC ACTCCGGGGA GAAGCCGGTC CCCACTCTCC CCCAGTTCAC CATGGGCCCC 
AATGTGAAGA TCAACGTGTT GGAAGACTTT GAGGGAGAGA ATCCCCAGGT GCCCAAGCTT 
GAGAAGAGCA TCAGTGGGAC CAGCCCCAAG CGGGAACACC TGCCTCTGGC CGTGGGCATC 
GCCTTCTTCC TCATGACGCT CTTGGCCTCC TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_034238.1
CDS107..799
Translation

Target ORF information:

RefSeq Version NM_010108.2
Organism Mus musculus(house mouse)
Definition Mus musculus ephrin A3 (Efna3), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_010108.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG 
CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC 
AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT 
ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG 
TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG 
GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT 
TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC 
ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC 
TCCACATCGC ACTCCGGGGA GAAGCCGGTC CCCACTCTCC CCCAGTTCAC CATGGGCCCC 
AATGTGAAGA TCAACGTGTT GGAAGACTTT GAGGGAGAGA ATCCCCAGGT GCCCAAGCTT 
GAGAAGAGCA TCAGTGGGAC CAGCCCCAAG CGGGAACACC TGCCTCTGGC CGTGGGCATC 
GCCTTCTTCC TCATGACGCT CTTGGCCTCC TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu31616
Clone ID Related Accession (Same CDS sequence) NM_001377116.1 , XM_006500988.2
Accession Version NM_001377116.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 615bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-12
Organism Mus musculus(house mouse)
Product ephrin-A3 isoform b precursor
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC171273.1 and AC132327.3. On Dec 13, 2019 this sequence version replaced XM_006500988.3. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR7345562.3683927.1, ERR2680377.1080161.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164139, SAMN01164141 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: full length. 

1
61
121
181
241
301
361
421
481
541
601
ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG 
CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC 
AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT 
ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG 
TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG 
GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT 
TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC 
ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC 
TCCAAAGACT TTGAGGGAGA GAATCCCCAG GTGCCCAAGC TTGAGAAGAG CATCAGTGGG 
ACCAGCCCCA AGCGGGAACA CCTGCCTCTG GCCGTGGGCA TCGCCTTCTT CCTCATGACG 
CTCTTGGCCT CCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001364045.1
CDS107..721
Translation

Target ORF information:

RefSeq Version NM_001377116.1
Organism Mus musculus(house mouse)
Definition Mus musculus ephrin A3 (Efna3), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001377116.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
ATGGCGGCGG CTCCGCTGCT GCTGCTGCTG CTGCTCGTGC CCGTGCCGCT GCTGCCGCTG 
CTGGCCCAGG GGCCTGGGGG CGCACTGGGA AACCGGCATG CGGTATACTG GAACAGCTCC 
AATCAGCACC TGCGGCGAGA GGGCTACACC GTGCAGGTGA ACGTGAACGA CTATCTGGAT 
ATTTACTGTC CGCACTACAA CAGCTCAGGG CCTGGCGGCG GGGCGGAGCA GTACGTGCTG 
TACATGGTGA ACCTGAGCGG CTACCGCACC TGCAACGCCA GCCAAGGCTC CAAGCGCTGG 
GAATGCAACC GGCAGCACGC CTCGCACAGC CCCATCAAGT TCTCCGAGAA GTTCCAGCGT 
TACAGCGCCT TCTCGCTGGG CTATGAATTC CATGCCGGCC AAGAATACTA CTACATCTCC 
ACGCCCACTC ACAACCTGCA CTGGAAGTGT CTGAGGATGA AGGTGTTCGT CTGCTGCGCC 
TCCAAAGACT TTGAGGGAGA GAATCCCCAG GTGCCCAAGC TTGAGAAGAG CATCAGTGGG 
ACCAGCCCCA AGCGGGAACA CCTGCCTCTG GCCGTGGGCA TCGCCTTCTT CCTCATGACG 
CTCTTGGCCT CCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu80548
Clone ID Related Accession (Same CDS sequence) NM_001377119.1 , XM_017319452.1 , NM_001377117.1 , NM_001377118.1
Accession Version NM_001377119.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 450bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-12
Organism Mus musculus(house mouse)
Product ephrin-A3 isoform c
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC171273.1 and AC132327.3. Transcript Variant: This variant (5), as well as variants 3 and 4, encodes isoform c. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## CDS exon combination :: SRR7345562.2899315.1, ERR2680377.135134.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMN01164139 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: full length. 

1
61
121
181
241
301
361
421
ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA 
TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC 
AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG 
CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC 
ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT 
GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG 
AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC 
TTCTTCCTCA TGACGCTCTT GGCCTCCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001364048.1
CDS324..773
Translation

Target ORF information:

RefSeq Version NM_001377119.1
Organism Mus musculus(house mouse)
Definition Mus musculus ephrin A3 (Efna3), transcript variant 5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001377119.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA 
TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC 
AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG 
CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC 
ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT 
GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG 
AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC 
TTCTTCCTCA TGACGCTCTT GGCCTCCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu80548
Clone ID Related Accession (Same CDS sequence) NM_001377119.1 , XM_017319452.1 , NM_001377117.1 , NM_001377118.1
Accession Version NM_001377117.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 450bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-12
Organism Mus musculus(house mouse)
Product ephrin-A3 isoform c
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC171273.1 and AC132327.3. On Dec 13, 2019 this sequence version replaced XM_017319452.2. Transcript Variant: This variant (3), as well as variants 4 and 5, encodes isoform c. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1660815.505298.1, SRR7345560.988858.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164139 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: full length. 

1
61
121
181
241
301
361
421
ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA 
TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC 
AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG 
CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC 
ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT 
GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG 
AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC 
TTCTTCCTCA TGACGCTCTT GGCCTCCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001364046.1
CDS374..823
Translation

Target ORF information:

RefSeq Version NM_001377117.1
Organism Mus musculus(house mouse)
Definition Mus musculus ephrin A3 (Efna3), transcript variant 3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001377117.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA 
TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC 
AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG 
CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC 
ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT 
GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG 
AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC 
TTCTTCCTCA TGACGCTCTT GGCCTCCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu80548
Clone ID Related Accession (Same CDS sequence) NM_001377119.1 , XM_017319452.1 , NM_001377117.1 , NM_001377118.1
Accession Version NM_001377118.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 450bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-14
Organism Mus musculus(house mouse)
Product ephrin-A3 isoform c
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC171273.1 and AC132327.3. On Dec 15, 2019 this sequence version replaced XM_030252414.1. Transcript Variant: This variant (4), as well as variants 3 and 5, encodes isoform c. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR7345562.903724.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164139 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: full length. 

1
61
121
181
241
301
361
421
ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA 
TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC 
AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG 
CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC 
ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT 
GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG 
AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC 
TTCTTCCTCA TGACGCTCTT GGCCTCCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001364047.1
CDS850..1299
Translation

Target ORF information:

RefSeq Version NM_001377118.1
Organism Mus musculus(house mouse)
Definition Mus musculus ephrin A3 (Efna3), transcript variant 4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001377118.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA 
TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC 
AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG 
CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC 
ACATCGCACT CCGGGGAGAA GCCGGTCCCC ACTCTCCCCC AGTTCACCAT GGGCCCCAAT 
GTGAAGATCA ACGTGTTGGA AGACTTTGAG GGAGAGAATC CCCAGGTGCC CAAGCTTGAG 
AAGAGCATCA GTGGGACCAG CCCCAAGCGG GAACACCTGC CTCTGGCCGT GGGCATCGCC 
TTCTTCCTCA TGACGCTCTT GGCCTCCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu90679
Clone ID Related Accession (Same CDS sequence) NM_001377121.1 , NM_001377120.1
Accession Version NM_001377121.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 372bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-12
Organism Mus musculus(house mouse)
Product ephrin-A3 isoform d
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC171273.1 and AC132327.3. Transcript Variant: This variant (7), as well as variant 6, encodes isoform d. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR7345562.2005783.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164139, SAMN01164141 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA 
TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC 
AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG 
CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC 
AAAGACTTTG AGGGAGAGAA TCCCCAGGTG CCCAAGCTTG AGAAGAGCAT CAGTGGGACC 
AGCCCCAAGC GGGAACACCT GCCTCTGGCC GTGGGCATCG CCTTCTTCCT CATGACGCTC 
TTGGCCTCCT AG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001364050.1
CDS324..695
Translation

Target ORF information:

RefSeq Version NM_001377121.1
Organism Mus musculus(house mouse)
Definition Mus musculus ephrin A3 (Efna3), transcript variant 7, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001377121.1

ORF Insert Sequence:

1
61
121
181
241
301
361
ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA 
TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC 
AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG 
CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC 
AAAGACTTTG AGGGAGAGAA TCCCCAGGTG CCCAAGCTTG AGAAGAGCAT CAGTGGGACC 
AGCCCCAAGC GGGAACACCT GCCTCTGGCC GTGGGCATCG CCTTCTTCCT CATGACGCTC 
TTGGCCTCCT AG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu90679
Clone ID Related Accession (Same CDS sequence) NM_001377121.1 , NM_001377120.1
Accession Version NM_001377120.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 372bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-12
Organism Mus musculus(house mouse)
Product ephrin-A3 isoform d
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC171273.1 and AC132327.3. On Dec 13, 2019 this sequence version replaced XM_030252415.1. Transcript Variant: This variant (6), as well as variant 7, encodes isoform d. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR7345562.4138462.1, ERR2680377.548342.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164139, SAMN01164141 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA 
TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC 
AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG 
CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC 
AAAGACTTTG AGGGAGAGAA TCCCCAGGTG CCCAAGCTTG AGAAGAGCAT CAGTGGGACC 
AGCCCCAAGC GGGAACACCT GCCTCTGGCC GTGGGCATCG CCTTCTTCCT CATGACGCTC 
TTGGCCTCCT AG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001364049.1
CDS850..1221
Translation

Target ORF information:

RefSeq Version NM_001377120.1
Organism Mus musculus(house mouse)
Definition Mus musculus ephrin A3 (Efna3), transcript variant 6, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001377120.1

ORF Insert Sequence:

1
61
121
181
241
301
361
ATGGTGAACC TGAGCGGCTA CCGCACCTGC AACGCCAGCC AAGGCTCCAA GCGCTGGGAA 
TGCAACCGGC AGCACGCCTC GCACAGCCCC ATCAAGTTCT CCGAGAAGTT CCAGCGTTAC 
AGCGCCTTCT CGCTGGGCTA TGAATTCCAT GCCGGCCAAG AATACTACTA CATCTCCACG 
CCCACTCACA ACCTGCACTG GAAGTGTCTG AGGATGAAGG TGTTCGTCTG CTGCGCCTCC 
AAAGACTTTG AGGGAGAGAA TCCCCAGGTG CCCAAGCTTG AGAAGAGCAT CAGTGGGACC 
AGCCCCAAGC GGGAACACCT GCCTCTGGCC GTGGGCATCG CCTTCTTCCT CATGACGCTC 
TTGGCCTCCT AG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Desipramine targets astrocytes to attenuate synaptic plasticity via modulation of the ephrinA3/EphA4 signalling.
Neuropharmacology105154-163(2016 06)
Tanasic S,Mattusch C,Wagner EM,Eder M,Rupprecht R,Rammes G,Di Benedetto B


book

Proper closure of the optic fissure requires ephrin A5-EphB2-JNK signaling.
Development (Cambridge, England)143(3)461-72(2016 Feb)
Noh H,Lee H,Park E,Park S


book

Ephrin Ligands and Eph Receptors Show Regionally Restricted Expression in the Developing Palate and Tongue.
Frontiers in physiology760(2016)
Xavier GM,Miletich I,Cobourne MT


book

Ephrin-A3 promotes and maintains slow muscle fiber identity during postnatal development and reinnervation.
The Journal of cell biology211(5)1077-91(2015 Dec)
Stark DA,Coffey NJ,Pancoast HR,Arnold LL,Walker JP,Vall?e J,Robitaille R,Garcia ML,Cornelison DD


book

Quantitative assessment of computational models for retinotopic map formation.
Developmental neurobiology75(6)641-66(2015 Jun)
Hjorth JJ,Sterratt DC,Cutts CS,Willshaw DJ,Eglen SJ