Gene Symbol | Alms1 |
Entrez Gene ID | 236266 |
Full Name | ALMS1, centrosome and basal body associated |
Synonyms | bbb |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Alms1 cDNA ORF clone
gRNAs
Gene Symbol | Alms1 |
Entrez Gene ID | 236266 |
Full Name | ALMS1, centrosome and basal body associated |
Synonyms | bbb |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006506052.3 | XP_006506115.1 | Alstrom syndrome protein 1 homolog isoform X4 |
NM_145223.2 | NP_660258.2 | Alstrom syndrome protein 1 homolog |
XM_006506049.3 | XP_006506112.1 | Alstrom syndrome protein 1 homolog isoform X1 |
XM_006506051.3 | XP_006506114.1 | Alstrom syndrome protein 1 homolog isoform X3 |
XM_006506054.3 | XP_006506117.1 | Alstrom syndrome protein 1 homolog isoform X6 |
XM_006506053.3 | XP_006506116.1 | Alstrom syndrome protein 1 homolog isoform X5 |
XM_006506050.3 | XP_006506113.1 | Alstrom syndrome protein 1 homolog isoform X2 |
XM_006506053.4 | XP_006506116.1 | Alstrom syndrome protein 1 homolog isoform X5 |
Adipose-Derived VEGF-mTOR Signaling Promotes Endometrial Hyperplasia and Cancer: Implications for Obese Women.
Sahoo SS, Lombard JM, Ius Y, O'Sullivan R, Wood LG, Nahar P, Jaaback K, Tanwar PS
Molecular cancer research : MCR(2017 Nov)
Disruption of SorCS2 reveals differences in the regulation of stereociliary bundle formation between hair cell types in the inner ear.
Forge A, Taylor RR, Dawson SJ, Lovett M, Jagger DJ
PLoS genetics13(3)e1006692(2017 Mar)
Mouse models of human ocular disease for translational research.
Krebs MP, Collin GB, Hicks WL, Yu M, Charette JR, Shi LY, Wang J, Naggert JK, Peachey NS, Nishina PM
PloS one12(8)e0183837(2017)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data conclude that deficiency of Alstrom protein impairs postnatal cardiomyocyte cell cycle arrest.
Title: Mutations in Alstr?m protein impair terminal differentiation of cardiomyocytes.
GLUT4 defects in adipose tissue are early signs of metabolic alterations in Alms1-deficient mice, a mouse model for obesity and insulin resistance.
Title: GLUT4 defects in adipose tissue are early signs of metabolic alterations in Alms1GT/GT, a mouse model for obesity and insulin resistance.
This study demonitrated that Alms1 localizes at the base of cilia in hypothalamic neurons and Alms1 is lost from this location in foz/foz mice.
Title: A truncating mutation of Alms1 reduces the number of hypothalamic neuronal cilia in obese mice.
a role for ALMS1 variants in the recycling endosome pathway
Title: The Alstr?m syndrome protein, ALMS1, interacts with ?-actinin and components of the endosome recycling pathway.
investigated the role of ALMS1 in the cochlea and the pathogenesis of hearing loss in Alstrom Syndrome
Title: Alstr?m Syndrome protein ALMS1 localizes to basal bodies of cochlear hair cells and regulates cilium-dependent planar cell polarity.
The following Alms1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Alms1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu11414 | |
Clone ID Related Accession (Same CDS sequence) | NM_145223.2 | |
Accession Version | NM_145223.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 9756bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-22 | |
Organism | Mus musculus(house mouse) | |
Product | Alstrom syndrome protein 1 homolog | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AF425257.1, AC104743.28, DV650553.1 and BM942574.1. On Jul 25, 2007 this sequence version replaced NM_145223.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AF425257.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384, SAMN01164131 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_660258.2 |
CDS | 116..9871 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu37223 | |
Clone ID Related Accession (Same CDS sequence) | XM_006506049.3 | |
Accession Version | XM_006506049.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 11202bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | Alstrom syndrome protein 1 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000072.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006506049.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006506112.1 |
CDS | 135..11336 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu37224 | |
Clone ID Related Accession (Same CDS sequence) | XM_006506050.3 | |
Accession Version | XM_006506050.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 11163bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | Alstrom syndrome protein 1 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000072.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006506050.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006506113.1 |
CDS | 135..11297 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu37225 | |
Clone ID Related Accession (Same CDS sequence) | XM_006506051.3 | |
Accession Version | XM_006506051.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 11103bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | Alstrom syndrome protein 1 homolog isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000072.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006506051.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006506114.1 |
CDS | 135..11237 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu37226 | |
Clone ID Related Accession (Same CDS sequence) | XM_006506052.3 | |
Accession Version | XM_006506052.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 11046bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | Alstrom syndrome protein 1 homolog isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000072.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006506052.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006506115.1 |
CDS | 136..11181 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu37227 | |
Clone ID Related Accession (Same CDS sequence) | XM_006506053.3 , XM_006506053.4 | |
Accession Version | XM_006506053.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 11028bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | Alstrom syndrome protein 1 homolog isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000072.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006506053.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006506116.1 |
CDS | 135..11162 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu37227 | |
Clone ID Related Accession (Same CDS sequence) | XM_006506053.3 , XM_006506053.4 | |
Accession Version | XM_006506053.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 11028bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | Alstrom syndrome protein 1 homolog isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000072.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006506053.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006506116.1 |
CDS | 135..11162 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu37228 | |
Clone ID Related Accession (Same CDS sequence) | XM_006506054.3 | |
Accession Version | XM_006506054.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 9795bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | Alstrom syndrome protein 1 homolog isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000072.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006506054.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006506117.1 |
CDS | 132..9926 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Adipose-Derived VEGF-mTOR Signaling Promotes Endometrial Hyperplasia and Cancer: Implications for Obese Women. |
Disruption of SorCS2 reveals differences in the regulation of stereociliary bundle formation between hair cell types in the inner ear. |
Mouse models of human ocular disease for translational research. |