Gene Symbol Alms1
Entrez Gene ID 236266
Full Name ALMS1, centrosome and basal body associated
Synonyms bbb
General protein information
Preferred NamesALMS1, centrosome and basal body associated
NamesAlstrom syndrome protein 1 homolog
Gene Type protein-coding
Organism Mus musculus(house mouse)
Genome
Chromosome: 6
Map Location: 6|6 C3
mRNA and Protein(s)
mRNA
Protein
Name
XM_006506052.3 XP_006506115.1
Alstrom syndrome protein 1 homolog isoform X4
NM_145223.2 NP_660258.2
Alstrom syndrome protein 1 homolog
XM_006506049.3 XP_006506112.1
Alstrom syndrome protein 1 homolog isoform X1
XM_006506051.3 XP_006506114.1
Alstrom syndrome protein 1 homolog isoform X3
XM_006506054.3 XP_006506117.1
Alstrom syndrome protein 1 homolog isoform X6
XM_006506053.3 XP_006506116.1
Alstrom syndrome protein 1 homolog isoform X5
XM_006506050.3 XP_006506113.1
Alstrom syndrome protein 1 homolog isoform X2
XM_006506053.4 XP_006506116.1
Alstrom syndrome protein 1 homolog isoform X5
Bos taurus (cattle) ALMS1 XP_005212573.1
Pan troglodytes (chimpanzee) ALMS1 XP_003949875.1
Canis lupus familiaris (dog) ALMS1 XP_533005.2
Mus musculus (house mouse) Alms1 NP_660258.2
Homo sapiens (human) ALMS1 NP_055935.4
ALMS1 XP_001105121.1
Rattus norvegicus (Norway rat) Alms1 NP_001100074.2
Related articles in PubMed
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Mouse models of human ocular disease for translational research.
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Alms1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Alms1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID OMu11414
Clone ID Related Accession (Same CDS sequence)
NM_145223.2
Accession Version NM_145223.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 9756bp) Protein sequence SNP
Vector pcDNA3.1+ /C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+ /C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-10-22
Organism Mus musculus(house mouse)
Product Alstrom syndrome protein 1 homolog
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AF425257.1, AC104743.28, DV650553.1 and BM942574.1. On Jul 25, 2007 this sequence version replaced NM_145223.1.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AF425257.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849384, SAMN01164131 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_660258.2 CDS 116..9871 Translation
Target ORF information:
RefSeq Version NM_145223.2 Organism Mus musculus(house mouse) Definition Mus musculus ALMS1, centrosome and basal body associated (Alms1), mRNA.
Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+ /C-(K)DYK
NM_145223.2
ORF Insert Sequence:
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID OMu37223
Clone ID Related Accession (Same CDS sequence)
XM_006506049.3
Accession Version XM_006506049.3 Latest version!
Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 11202bp) Protein sequence SNP
Vector pcDNA3.1+ /C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+ /C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-07
Organism Mus musculus(house mouse)
Product Alstrom syndrome protein 1 homolog isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000072.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 22, 2016 this sequence version replaced XM_006506049.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Mus musculus Annotation Release 108
Annotation Version :: 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG T AG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006506112.1 CDS 135..11336 Translation
Target ORF information:
RefSeq Version XM_006506049.3 Organism Mus musculus(house mouse) Definition Mus musculus ALMS1, centrosome and basal body associated (Alms1), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+ /C-(K)DYK
XM_006506049.3
ORF Insert Sequence:
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG T AG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID OMu37224
Clone ID Related Accession (Same CDS sequence)
XM_006506050.3
Accession Version XM_006506050.3 Latest version!
Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 11163bp) Protein sequence SNP
Vector pcDNA3.1+ /C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+ /C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-07
Organism Mus musculus(house mouse)
Product Alstrom syndrome protein 1 homolog isoform X2
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000072.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 22, 2016 this sequence version replaced XM_006506050.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Mus musculus Annotation Release 108
Annotation Version :: 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006506113.1 CDS 135..11297 Translation
Target ORF information:
RefSeq Version XM_006506050.3 Organism Mus musculus(house mouse) Definition Mus musculus ALMS1, centrosome and basal body associated (Alms1), transcript variant X2, mRNA.
Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+ /C-(K)DYK
XM_006506050.3
ORF Insert Sequence:
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID OMu37225
Clone ID Related Accession (Same CDS sequence)
XM_006506051.3
Accession Version XM_006506051.3 Latest version!
Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 11103bp) Protein sequence SNP
Vector pcDNA3.1+ /C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+ /C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-07
Organism Mus musculus(house mouse)
Product Alstrom syndrome protein 1 homolog isoform X3
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000072.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 22, 2016 this sequence version replaced XM_006506051.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Mus musculus Annotation Release 108
Annotation Version :: 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG TAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006506114.1 CDS 135..11237 Translation
Target ORF information:
RefSeq Version XM_006506051.3 Organism Mus musculus(house mouse) Definition Mus musculus ALMS1, centrosome and basal body associated (Alms1), transcript variant X3, mRNA.
Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+ /C-(K)DYK
XM_006506051.3
ORF Insert Sequence:
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG TAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID OMu37226
Clone ID Related Accession (Same CDS sequence)
XM_006506052.3
Accession Version XM_006506052.3 Latest version!
Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 11046bp) Protein sequence SNP
Vector pcDNA3.1+ /C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+ /C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-07
Organism Mus musculus(house mouse)
Product Alstrom syndrome protein 1 homolog isoform X4
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000072.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 22, 2016 this sequence version replaced XM_006506052.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Mus musculus Annotation Release 108
Annotation Version :: 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG TAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006506115.1 CDS 136..11181 Translation
Target ORF information:
RefSeq Version XM_006506052.3 Organism Mus musculus(house mouse) Definition Mus musculus ALMS1, centrosome and basal body associated (Alms1), transcript variant X4, mRNA.
Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+ /C-(K)DYK
XM_006506052.3
ORF Insert Sequence:
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG TAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID OMu37227
Clone ID Related Accession (Same CDS sequence)
XM_006506053.3
, XM_006506053.4
Accession Version XM_006506053.3
Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 11028bp) Protein sequence SNP
Vector pcDNA3.1+ /C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+ /C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-21
Organism Mus musculus(house mouse)
Product Alstrom syndrome protein 1 homolog isoform X5
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000072.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 22, 2016 this sequence version replaced XM_006506053.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Mus musculus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006506116.1 CDS 135..11162 Translation
Target ORF information:
RefSeq Version XM_006506053.3 Organism Mus musculus(house mouse) Definition Mus musculus Alstrom syndrome 1 (Alms1), transcript variant X5, mRNA.
Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+ /C-(K)DYK
XM_006506053.3
ORF Insert Sequence:
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID OMu37227
Clone ID Related Accession (Same CDS sequence)
XM_006506053.3
, XM_006506053.4
Accession Version XM_006506053.4 Latest version!
Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 11028bp) Protein sequence SNP
Vector pcDNA3.1+ /C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+ /C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-07
Organism Mus musculus(house mouse)
Product Alstrom syndrome protein 1 homolog isoform X5
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000072.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Aug 8, 2019 this sequence version replaced XM_006506053.3.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Mus musculus Annotation Release 108
Annotation Version :: 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006506116.1 CDS 135..11162 Translation
Target ORF information:
RefSeq Version XM_006506053.4 Organism Mus musculus(house mouse) Definition Mus musculus ALMS1, centrosome and basal body associated (Alms1), transcript variant X5, mRNA.
Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+ /C-(K)DYK
XM_006506053.4
ORF Insert Sequence:
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID OMu37228
Clone ID Related Accession (Same CDS sequence)
XM_006506054.3
Accession Version XM_006506054.3 Latest version!
Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 9795bp) Protein sequence SNP
Vector pcDNA3.1+ /C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+ /C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-07
Organism Mus musculus(house mouse)
Product Alstrom syndrome protein 1 homolog isoform X6
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000072.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 22, 2016 this sequence version replaced XM_006506054.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Mus musculus Annotation Release 108
Annotation Version :: 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG TAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006506117.1 CDS 132..9926 Translation
Target ORF information:
RefSeq Version XM_006506054.3 Organism Mus musculus(house mouse) Definition Mus musculus ALMS1, centrosome and basal body associated (Alms1), transcript variant X6, mRNA.
Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+ /C-(K)DYK
XM_006506054.3
ORF Insert Sequence:
1 ATGGAGCCTG AGGACCTGCC GTGGCCTGAC GAGCTGGAGG AGGAGGAGGA AGAAGAGGAG TAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
User Manual
NM_145223.2
