Gene Symbol
Slc9a6
Entrez Gene ID
236794
Full Name
solute carrier family 9 (sodium/hydrogen exchanger), member 6
Synonyms
3732426M05,6430520C02Rik,NHE6,mKIAA0267
General protein information
Preferred Namessolute carrier family 9 (sodium/hydrogen exchanger), member 6
Namessodium/hydrogen exchanger 6 solute carrier family 9 (sodium/hydrogen exchanger)
Gene Type
protein-coding
Organism
Mus musculus(house mouse)
Genome
Chromosome: X
Map Location: X|X A6
mRNA and Protein(s)
mRNA
Protein
Name
NM_172780.3
NP_766368.2
sodium/hydrogen exchanger 6
XM_006527979.2
XP_006528042.1
sodium/hydrogen exchanger 6 isoform X1
NM_001358861.1
NP_001345790.1
sodium/hydrogen exchanger 6 isoform 2
XM_006527980.3
XP_006528043.1
sodium/hydrogen exchanger 6 isoform X1
NM_172780.4
NP_766368.2
sodium/hydrogen exchanger 6 isoform 1
Pan troglodytes (chimpanzee)
SLC9A6
XP_529172.3
Bos taurus (cattle)
SLC9A6
NP_001094616.1
Danio rerio (zebrafish)
slc9a6a
NP_001091726.2
Anopheles gambiae (African malaria mosquito)
AgaP_AGAP008718
XP_314826.4
Xenopus tropicalis (tropical clawed frog)
slc9a6
XP_002932638.2
Mus musculus (house mouse)
Slc9a6
NP_766368.2
Rattus norvegicus (Norway rat)
Slc9a6
XP_217630.3
Gallus gallus (chicken)
SLC9A6
XP_420229.3
Homo sapiens (human)
SLC9A6
NP_001036002.1
Canis lupus familiaris (dog)
SLC9A6
XP_538181.4
Drosophila melanogaster (fruit fly)
Nhe3
NP_723202.2
Caenorhabditis elegans (roundworm)
nhx-5
NP_001024721.1
SLC9A6
XP_001101721.1
Related articles in PubMed
The murine choroid plexus epithelium expresses the 2Cl
Damkier HH, Christensen HL, Christensen IB, Wu Q, Fenton RA, Praetorius J American journal of physiology. Cell physiology(2017 Dec)
Mixed Neurodevelopmental and Neurodegenerative Pathology in
Xu M, Ouyang Q, Gong J, Pescosolido MF, Pruett BS, Mishra S, Schmidt M, Jones RN, Gamsiz Uzun ED, Lizarraga SB, Morrow EM eNeuro4(6)(2017 Nov-Dec)
Emerging roles of Na?/H? exchangers in epilepsy and developmental brain disorders.
Zhao H, Carney KE, Falgoust L, Pan JW, Sun D, Zhang Z Progress in neurobiology138-14019-35(2016 Mar-May)
X-linked Christianson syndrome: heterozygous female Slc9a6 knockout mice develop mosaic neuropathological changes and related behavioral abnormalities.
Sikora J, Leddy J, Gulinello M, Walkley SU Disease models & mechanisms9(1)13-23(2016 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Slc9a6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Slc9a6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
OMu56244
Clone ID Related Accession (Same CDS sequence)
XM_006527979.2
, NM_001358861.1
, XM_006527980.3
Accession Version
NM_001358861.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1950bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-03-03
Organism
Mus musculus(house mouse)
Product
sodium/hydrogen exchanger 6 isoform 2
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC048362.14 and AL672085.6. On Dec 12, 2017 this sequence version replaced XM_006527979.2.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR1660815.216888.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 ATGGACGAGG AGATCGTGTC CGAGAAGCAG GCGGAGGAGA GCCATCGGCA GGACAGCGCC AACCTGCTCA TCTTCATCCT GCTGCTCACC CTCACCATTC TGACGATCTG GCTCTTCAAG CACCGCCGGG CCCGCTTCCT GCACGAAACC GGCCTTGCTA TGATTTATGG TCTTTTGGTA GGCCTCGTGC TTCGGTACGG CATTCATGTT CCAAGCGATG TGAATAATGT GACTCTGAGC TGTGAAGTGC AGTCAAGTCC AACTACCTTG TTGGTCAACG TCAGTGGAAA ATTTTATGAG TATACGCTGA AAGGAGAGAT TAGCTCACAT GAACTCAACA ATGTTCAAGA TAATGAAATG CTTAGGAAGG TTACTTTTGA TCCAGAAGTC TTTTTCAACA TACTGCTTCC TCCTATCATA TTTTATGCAG GGTACAGTCT CAAAAGGAGA CATTTCTTCC GGAACCTTGG GTCTATCTTA GCATATGCCT TTCTTGGAAC AGCAATTTCT TGTTTCGTTA TTGGGTCCAT CATGTATGGC TGTGTAACCC TGATGAAGGT GACCGGGCAG CTCGCGGGAG ATTTTTACTT TACAGATTGC TTGCTGTTTG GTGCCATTGT TTCAGCCACC GACCCAGTGA CTGTTCTTGC CATCTTCCAT GAGCTTCAAG TTGACGTTGA ACTCTACGCT CTTCTCTTCG GGGAAAGTGT CCTCAATGAC GCGGTTGCCA TAGTGCTGTC CTCCTCAATA GTGGCATACC AGCCAGCGGG AGACAACAGC CACACCTTTG ACGTTACAGC CATGTTCAAA TCTATTGGAA TCTTCCTTGG GATCTTCAGT GGATCTTTTG CAATGGGTGC TGCAACAGGC GTGGTAACAG CTTTAGTGAC AAAGTTCACA AAGCTGAGAG AGTTCCAGCT GTTGGAGACA GGCCTTTTCT TCTTGATGTC CTGGAGCACC TTTCTTCTGG CTGAAGCATG GGGTTTCACA GGTGTGGTTG CAGTATTGTT TTGTGGCATC ACACAAGCAC ATTACACGTA CAATAATTTG TCTACAGAGT CTCAGCATAG AACAAAGCAG TTGTTTGAGC TTCTCAATTT TTTAGCGGAG AATTTCATCT TTTCCTACAT GGGGCTGACG CTGTTCACCT TCCAGAATCA CGTCTTTAAC CCAACATTTG TCGTAGGAGC ATTCATTGCT ATTTTCTTGG GAAGAGCTGC CAATATTTAT CCCTTGTCTC TCTTACTTAA TTTGGGTAGA AGAAGTAAGA TTGGATCAAA TTTTCAACAC ATGATGATGT TTGCTGGTCT TCGTGGTGCA ATGGCATTTG CCTTGGCCAT TCGAGATACT GCCACTTATG CACGACAAAT GATGTTCAGC ACCACACTTC TGATCGTGTT TTTTACTGTG TGGGTATTTG GTGGTGGCAC CACTGCCATG CTGTCATGCC TGCATATAAG GGTTGGTGTT GATTCAGACC AAGAACATTT GGGTGTTCCT GACAACGAAA GGAGAACCAC CAAAGCAGAG AGTGCCTGGC TCTTTCGGAT GTGGTACAAC TTCGATCATA ACTATCTGAA GCCCCTGCTG ACCCACAGTG GGCCTCCTCT GACTACCACA CTCCCAGCCT GCTGTGGGCC AATCGCCAGG TGCCTGACCA GCCCCCAAGC ATATGAAAAC CAGGAGCAGT TGAAAGATGA TGACTCTGAT CTCATTCTCA ATGATGGTGA TATCAGTCTG ACATATGGGG ATTCTACTGT GAACACCGAG TCCGCAACAG CCAGCGCCCC AAGGAGATTT ATGGGCAACA GTTCTGAAGA TGCCTTGGAC CGGGAGCTTA CATTTGGGGA CCACGAACTA GTCATTCGTG GCACACGCCT GGTTCTTCCG ATGGATGATT CTGAACCTGC GTTAAATTCA TTAGATGATA CGAGACACAG TCCGGCCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001345790.1
CDS 97..2046
Translation
Target ORF information:
RefSeq Version NM_001358861.1
Organism Mus musculus(house mouse)
Definition Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 6 (Slc9a6), transcript variant 2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001358861.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 ATGGACGAGG AGATCGTGTC CGAGAAGCAG GCGGAGGAGA GCCATCGGCA GGACAGCGCC AACCTGCTCA TCTTCATCCT GCTGCTCACC CTCACCATTC TGACGATCTG GCTCTTCAAG CACCGCCGGG CCCGCTTCCT GCACGAAACC GGCCTTGCTA TGATTTATGG TCTTTTGGTA GGCCTCGTGC TTCGGTACGG CATTCATGTT CCAAGCGATG TGAATAATGT GACTCTGAGC TGTGAAGTGC AGTCAAGTCC AACTACCTTG TTGGTCAACG TCAGTGGAAA ATTTTATGAG TATACGCTGA AAGGAGAGAT TAGCTCACAT GAACTCAACA ATGTTCAAGA TAATGAAATG CTTAGGAAGG TTACTTTTGA TCCAGAAGTC TTTTTCAACA TACTGCTTCC TCCTATCATA TTTTATGCAG GGTACAGTCT CAAAAGGAGA CATTTCTTCC GGAACCTTGG GTCTATCTTA GCATATGCCT TTCTTGGAAC AGCAATTTCT TGTTTCGTTA TTGGGTCCAT CATGTATGGC TGTGTAACCC TGATGAAGGT GACCGGGCAG CTCGCGGGAG ATTTTTACTT TACAGATTGC TTGCTGTTTG GTGCCATTGT TTCAGCCACC GACCCAGTGA CTGTTCTTGC CATCTTCCAT GAGCTTCAAG TTGACGTTGA ACTCTACGCT CTTCTCTTCG GGGAAAGTGT CCTCAATGAC GCGGTTGCCA TAGTGCTGTC CTCCTCAATA GTGGCATACC AGCCAGCGGG AGACAACAGC CACACCTTTG ACGTTACAGC CATGTTCAAA TCTATTGGAA TCTTCCTTGG GATCTTCAGT GGATCTTTTG CAATGGGTGC TGCAACAGGC GTGGTAACAG CTTTAGTGAC AAAGTTCACA AAGCTGAGAG AGTTCCAGCT GTTGGAGACA GGCCTTTTCT TCTTGATGTC CTGGAGCACC TTTCTTCTGG CTGAAGCATG GGGTTTCACA GGTGTGGTTG CAGTATTGTT TTGTGGCATC ACACAAGCAC ATTACACGTA CAATAATTTG TCTACAGAGT CTCAGCATAG AACAAAGCAG TTGTTTGAGC TTCTCAATTT TTTAGCGGAG AATTTCATCT TTTCCTACAT GGGGCTGACG CTGTTCACCT TCCAGAATCA CGTCTTTAAC CCAACATTTG TCGTAGGAGC ATTCATTGCT ATTTTCTTGG GAAGAGCTGC CAATATTTAT CCCTTGTCTC TCTTACTTAA TTTGGGTAGA AGAAGTAAGA TTGGATCAAA TTTTCAACAC ATGATGATGT TTGCTGGTCT TCGTGGTGCA ATGGCATTTG CCTTGGCCAT TCGAGATACT GCCACTTATG CACGACAAAT GATGTTCAGC ACCACACTTC TGATCGTGTT TTTTACTGTG TGGGTATTTG GTGGTGGCAC CACTGCCATG CTGTCATGCC TGCATATAAG GGTTGGTGTT GATTCAGACC AAGAACATTT GGGTGTTCCT GACAACGAAA GGAGAACCAC CAAAGCAGAG AGTGCCTGGC TCTTTCGGAT GTGGTACAAC TTCGATCATA ACTATCTGAA GCCCCTGCTG ACCCACAGTG GGCCTCCTCT GACTACCACA CTCCCAGCCT GCTGTGGGCC AATCGCCAGG TGCCTGACCA GCCCCCAAGC ATATGAAAAC CAGGAGCAGT TGAAAGATGA TGACTCTGAT CTCATTCTCA ATGATGGTGA TATCAGTCTG ACATATGGGG ATTCTACTGT GAACACCGAG TCCGCAACAG CCAGCGCCCC AAGGAGATTT ATGGGCAACA GTTCTGAAGA TGCCTTGGAC CGGGAGCTTA CATTTGGGGA CCACGAACTA GTCATTCGTG GCACACGCCT GGTTCTTCCG ATGGATGATT CTGAACCTGC GTTAAATTCA TTAGATGATA CGAGACACAG TCCGGCCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu56244
Clone ID Related Accession (Same CDS sequence)
XM_006527979.2
, NM_001358861.1
, XM_006527980.3
Accession Version
XM_006527979.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1950bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-06-21
Organism
Mus musculus(House mouse)
Product
sodium/hydrogen exchanger 6 isoform X1
Comment
MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000086.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 22, 2016 this sequence version replaced XM_006527979.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Mus musculus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 ATGGACGAGG AGATCGTGTC CGAGAAGCAG GCGGAGGAGA GCCATCGGCA GGACAGCGCC AACCTGCTCA TCTTCATCCT GCTGCTCACC CTCACCATTC TGACGATCTG GCTCTTCAAG CACCGCCGGG CCCGCTTCCT GCACGAAACC GGCCTTGCTA TGATTTATGG TCTTTTGGTA GGCCTCGTGC TTCGGTACGG CATTCATGTT CCAAGCGATG TGAATAATGT GACTCTGAGC TGTGAAGTGC AGTCAAGTCC AACTACCTTG TTGGTCAACG TCAGTGGAAA ATTTTATGAG TATACGCTGA AAGGAGAGAT TAGCTCACAT GAACTCAACA ATGTTCAAGA TAATGAAATG CTTAGGAAGG TTACTTTTGA TCCAGAAGTC TTTTTCAACA TACTGCTTCC TCCTATCATA TTTTATGCAG GGTACAGTCT CAAAAGGAGA CATTTCTTCC GGAACCTTGG GTCTATCTTA GCATATGCCT TTCTTGGAAC AGCAATTTCT TGTTTCGTTA TTGGGTCCAT CATGTATGGC TGTGTAACCC TGATGAAGGT GACCGGGCAG CTCGCGGGAG ATTTTTACTT TACAGATTGC TTGCTGTTTG GTGCCATTGT TTCAGCCACC GACCCAGTGA CTGTTCTTGC CATCTTCCAT GAGCTTCAAG TTGACGTTGA ACTCTACGCT CTTCTCTTCG GGGAAAGTGT CCTCAATGAC GCGGTTGCCA TAGTGCTGTC CTCCTCAATA GTGGCATACC AGCCAGCGGG AGACAACAGC CACACCTTTG ACGTTACAGC CATGTTCAAA TCTATTGGAA TCTTCCTTGG GATCTTCAGT GGATCTTTTG CAATGGGTGC TGCAACAGGC GTGGTAACAG CTTTAGTGAC AAAGTTCACA AAGCTGAGAG AGTTCCAGCT GTTGGAGACA GGCCTTTTCT TCTTGATGTC CTGGAGCACC TTTCTTCTGG CTGAAGCATG GGGTTTCACA GGTGTGGTTG CAGTATTGTT TTGTGGCATC ACACAAGCAC ATTACACGTA CAATAATTTG TCTACAGAGT CTCAGCATAG AACAAAGCAG TTGTTTGAGC TTCTCAATTT TTTAGCGGAG AATTTCATCT TTTCCTACAT GGGGCTGACG CTGTTCACCT TCCAGAATCA CGTCTTTAAC CCAACATTTG TCGTAGGAGC ATTCATTGCT ATTTTCTTGG GAAGAGCTGC CAATATTTAT CCCTTGTCTC TCTTACTTAA TTTGGGTAGA AGAAGTAAGA TTGGATCAAA TTTTCAACAC ATGATGATGT TTGCTGGTCT TCGTGGTGCA ATGGCATTTG CCTTGGCCAT TCGAGATACT GCCACTTATG CACGACAAAT GATGTTCAGC ACCACACTTC TGATCGTGTT TTTTACTGTG TGGGTATTTG GTGGTGGCAC CACTGCCATG CTGTCATGCC TGCATATAAG GGTTGGTGTT GATTCAGACC AAGAACATTT GGGTGTTCCT GACAACGAAA GGAGAACCAC CAAAGCAGAG AGTGCCTGGC TCTTTCGGAT GTGGTACAAC TTCGATCATA ACTATCTGAA GCCCCTGCTG ACCCACAGTG GGCCTCCTCT GACTACCACA CTCCCAGCCT GCTGTGGGCC AATCGCCAGG TGCCTGACCA GCCCCCAAGC ATATGAAAAC CAGGAGCAGT TGAAAGATGA TGACTCTGAT CTCATTCTCA ATGATGGTGA TATCAGTCTG ACATATGGGG ATTCTACTGT GAACACCGAG TCCGCAACAG CCAGCGCCCC AAGGAGATTT ATGGGCAACA GTTCTGAAGA TGCCTTGGAC CGGGAGCTTA CATTTGGGGA CCACGAACTA GTCATTCGTG GCACACGCCT GGTTCTTCCG ATGGATGATT CTGAACCTGC GTTAAATTCA TTAGATGATA CGAGACACAG TCCGGCCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006528042.1
CDS 166..2115
Translation
Target ORF information:
RefSeq Version XM_006527979.2
Organism Mus musculus(House mouse)
Definition Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 6 (Slc9a6), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006527979.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 ATGGACGAGG AGATCGTGTC CGAGAAGCAG GCGGAGGAGA GCCATCGGCA GGACAGCGCC AACCTGCTCA TCTTCATCCT GCTGCTCACC CTCACCATTC TGACGATCTG GCTCTTCAAG CACCGCCGGG CCCGCTTCCT GCACGAAACC GGCCTTGCTA TGATTTATGG TCTTTTGGTA GGCCTCGTGC TTCGGTACGG CATTCATGTT CCAAGCGATG TGAATAATGT GACTCTGAGC TGTGAAGTGC AGTCAAGTCC AACTACCTTG TTGGTCAACG TCAGTGGAAA ATTTTATGAG TATACGCTGA AAGGAGAGAT TAGCTCACAT GAACTCAACA ATGTTCAAGA TAATGAAATG CTTAGGAAGG TTACTTTTGA TCCAGAAGTC TTTTTCAACA TACTGCTTCC TCCTATCATA TTTTATGCAG GGTACAGTCT CAAAAGGAGA CATTTCTTCC GGAACCTTGG GTCTATCTTA GCATATGCCT TTCTTGGAAC AGCAATTTCT TGTTTCGTTA TTGGGTCCAT CATGTATGGC TGTGTAACCC TGATGAAGGT GACCGGGCAG CTCGCGGGAG ATTTTTACTT TACAGATTGC TTGCTGTTTG GTGCCATTGT TTCAGCCACC GACCCAGTGA CTGTTCTTGC CATCTTCCAT GAGCTTCAAG TTGACGTTGA ACTCTACGCT CTTCTCTTCG GGGAAAGTGT CCTCAATGAC GCGGTTGCCA TAGTGCTGTC CTCCTCAATA GTGGCATACC AGCCAGCGGG AGACAACAGC CACACCTTTG ACGTTACAGC CATGTTCAAA TCTATTGGAA TCTTCCTTGG GATCTTCAGT GGATCTTTTG CAATGGGTGC TGCAACAGGC GTGGTAACAG CTTTAGTGAC AAAGTTCACA AAGCTGAGAG AGTTCCAGCT GTTGGAGACA GGCCTTTTCT TCTTGATGTC CTGGAGCACC TTTCTTCTGG CTGAAGCATG GGGTTTCACA GGTGTGGTTG CAGTATTGTT TTGTGGCATC ACACAAGCAC ATTACACGTA CAATAATTTG TCTACAGAGT CTCAGCATAG AACAAAGCAG TTGTTTGAGC TTCTCAATTT TTTAGCGGAG AATTTCATCT TTTCCTACAT GGGGCTGACG CTGTTCACCT TCCAGAATCA CGTCTTTAAC CCAACATTTG TCGTAGGAGC ATTCATTGCT ATTTTCTTGG GAAGAGCTGC CAATATTTAT CCCTTGTCTC TCTTACTTAA TTTGGGTAGA AGAAGTAAGA TTGGATCAAA TTTTCAACAC ATGATGATGT TTGCTGGTCT TCGTGGTGCA ATGGCATTTG CCTTGGCCAT TCGAGATACT GCCACTTATG CACGACAAAT GATGTTCAGC ACCACACTTC TGATCGTGTT TTTTACTGTG TGGGTATTTG GTGGTGGCAC CACTGCCATG CTGTCATGCC TGCATATAAG GGTTGGTGTT GATTCAGACC AAGAACATTT GGGTGTTCCT GACAACGAAA GGAGAACCAC CAAAGCAGAG AGTGCCTGGC TCTTTCGGAT GTGGTACAAC TTCGATCATA ACTATCTGAA GCCCCTGCTG ACCCACAGTG GGCCTCCTCT GACTACCACA CTCCCAGCCT GCTGTGGGCC AATCGCCAGG TGCCTGACCA GCCCCCAAGC ATATGAAAAC CAGGAGCAGT TGAAAGATGA TGACTCTGAT CTCATTCTCA ATGATGGTGA TATCAGTCTG ACATATGGGG ATTCTACTGT GAACACCGAG TCCGCAACAG CCAGCGCCCC AAGGAGATTT ATGGGCAACA GTTCTGAAGA TGCCTTGGAC CGGGAGCTTA CATTTGGGGA CCACGAACTA GTCATTCGTG GCACACGCCT GGTTCTTCCG ATGGATGATT CTGAACCTGC GTTAAATTCA TTAGATGATA CGAGACACAG TCCGGCCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu56244
Clone ID Related Accession (Same CDS sequence)
XM_006527979.2
, NM_001358861.1
, XM_006527980.3
Accession Version
XM_006527980.3 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1950bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-08-07
Organism
Mus musculus(house mouse)
Product
sodium/hydrogen exchanger 6 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000086.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 22, 2016 this sequence version replaced XM_006527980.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Mus musculus Annotation Release 108
Annotation Version :: 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 ATGGACGAGG AGATCGTGTC CGAGAAGCAG GCGGAGGAGA GCCATCGGCA GGACAGCGCC AACCTGCTCA TCTTCATCCT GCTGCTCACC CTCACCATTC TGACGATCTG GCTCTTCAAG CACCGCCGGG CCCGCTTCCT GCACGAAACC GGCCTTGCTA TGATTTATGG TCTTTTGGTA GGCCTCGTGC TTCGGTACGG CATTCATGTT CCAAGCGATG TGAATAATGT GACTCTGAGC TGTGAAGTGC AGTCAAGTCC AACTACCTTG TTGGTCAACG TCAGTGGAAA ATTTTATGAG TATACGCTGA AAGGAGAGAT TAGCTCACAT GAACTCAACA ATGTTCAAGA TAATGAAATG CTTAGGAAGG TTACTTTTGA TCCAGAAGTC TTTTTCAACA TACTGCTTCC TCCTATCATA TTTTATGCAG GGTACAGTCT CAAAAGGAGA CATTTCTTCC GGAACCTTGG GTCTATCTTA GCATATGCCT TTCTTGGAAC AGCAATTTCT TGTTTCGTTA TTGGGTCCAT CATGTATGGC TGTGTAACCC TGATGAAGGT GACCGGGCAG CTCGCGGGAG ATTTTTACTT TACAGATTGC TTGCTGTTTG GTGCCATTGT TTCAGCCACC GACCCAGTGA CTGTTCTTGC CATCTTCCAT GAGCTTCAAG TTGACGTTGA ACTCTACGCT CTTCTCTTCG GGGAAAGTGT CCTCAATGAC GCGGTTGCCA TAGTGCTGTC CTCCTCAATA GTGGCATACC AGCCAGCGGG AGACAACAGC CACACCTTTG ACGTTACAGC CATGTTCAAA TCTATTGGAA TCTTCCTTGG GATCTTCAGT GGATCTTTTG CAATGGGTGC TGCAACAGGC GTGGTAACAG CTTTAGTGAC AAAGTTCACA AAGCTGAGAG AGTTCCAGCT GTTGGAGACA GGCCTTTTCT TCTTGATGTC CTGGAGCACC TTTCTTCTGG CTGAAGCATG GGGTTTCACA GGTGTGGTTG CAGTATTGTT TTGTGGCATC ACACAAGCAC ATTACACGTA CAATAATTTG TCTACAGAGT CTCAGCATAG AACAAAGCAG TTGTTTGAGC TTCTCAATTT TTTAGCGGAG AATTTCATCT TTTCCTACAT GGGGCTGACG CTGTTCACCT TCCAGAATCA CGTCTTTAAC CCAACATTTG TCGTAGGAGC ATTCATTGCT ATTTTCTTGG GAAGAGCTGC CAATATTTAT CCCTTGTCTC TCTTACTTAA TTTGGGTAGA AGAAGTAAGA TTGGATCAAA TTTTCAACAC ATGATGATGT TTGCTGGTCT TCGTGGTGCA ATGGCATTTG CCTTGGCCAT TCGAGATACT GCCACTTATG CACGACAAAT GATGTTCAGC ACCACACTTC TGATCGTGTT TTTTACTGTG TGGGTATTTG GTGGTGGCAC CACTGCCATG CTGTCATGCC TGCATATAAG GGTTGGTGTT GATTCAGACC AAGAACATTT GGGTGTTCCT GACAACGAAA GGAGAACCAC CAAAGCAGAG AGTGCCTGGC TCTTTCGGAT GTGGTACAAC TTCGATCATA ACTATCTGAA GCCCCTGCTG ACCCACAGTG GGCCTCCTCT GACTACCACA CTCCCAGCCT GCTGTGGGCC AATCGCCAGG TGCCTGACCA GCCCCCAAGC ATATGAAAAC CAGGAGCAGT TGAAAGATGA TGACTCTGAT CTCATTCTCA ATGATGGTGA TATCAGTCTG ACATATGGGG ATTCTACTGT GAACACCGAG TCCGCAACAG CCAGCGCCCC AAGGAGATTT ATGGGCAACA GTTCTGAAGA TGCCTTGGAC CGGGAGCTTA CATTTGGGGA CCACGAACTA GTCATTCGTG GCACACGCCT GGTTCTTCCG ATGGATGATT CTGAACCTGC GTTAAATTCA TTAGATGATA CGAGACACAG TCCGGCCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006528043.1
CDS 160..2109
Translation
Target ORF information:
RefSeq Version XM_006527980.3
Organism Mus musculus(house mouse)
Definition Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 6 (Slc9a6), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006527980.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 ATGGACGAGG AGATCGTGTC CGAGAAGCAG GCGGAGGAGA GCCATCGGCA GGACAGCGCC AACCTGCTCA TCTTCATCCT GCTGCTCACC CTCACCATTC TGACGATCTG GCTCTTCAAG CACCGCCGGG CCCGCTTCCT GCACGAAACC GGCCTTGCTA TGATTTATGG TCTTTTGGTA GGCCTCGTGC TTCGGTACGG CATTCATGTT CCAAGCGATG TGAATAATGT GACTCTGAGC TGTGAAGTGC AGTCAAGTCC AACTACCTTG TTGGTCAACG TCAGTGGAAA ATTTTATGAG TATACGCTGA AAGGAGAGAT TAGCTCACAT GAACTCAACA ATGTTCAAGA TAATGAAATG CTTAGGAAGG TTACTTTTGA TCCAGAAGTC TTTTTCAACA TACTGCTTCC TCCTATCATA TTTTATGCAG GGTACAGTCT CAAAAGGAGA CATTTCTTCC GGAACCTTGG GTCTATCTTA GCATATGCCT TTCTTGGAAC AGCAATTTCT TGTTTCGTTA TTGGGTCCAT CATGTATGGC TGTGTAACCC TGATGAAGGT GACCGGGCAG CTCGCGGGAG ATTTTTACTT TACAGATTGC TTGCTGTTTG GTGCCATTGT TTCAGCCACC GACCCAGTGA CTGTTCTTGC CATCTTCCAT GAGCTTCAAG TTGACGTTGA ACTCTACGCT CTTCTCTTCG GGGAAAGTGT CCTCAATGAC GCGGTTGCCA TAGTGCTGTC CTCCTCAATA GTGGCATACC AGCCAGCGGG AGACAACAGC CACACCTTTG ACGTTACAGC CATGTTCAAA TCTATTGGAA TCTTCCTTGG GATCTTCAGT GGATCTTTTG CAATGGGTGC TGCAACAGGC GTGGTAACAG CTTTAGTGAC AAAGTTCACA AAGCTGAGAG AGTTCCAGCT GTTGGAGACA GGCCTTTTCT TCTTGATGTC CTGGAGCACC TTTCTTCTGG CTGAAGCATG GGGTTTCACA GGTGTGGTTG CAGTATTGTT TTGTGGCATC ACACAAGCAC ATTACACGTA CAATAATTTG TCTACAGAGT CTCAGCATAG AACAAAGCAG TTGTTTGAGC TTCTCAATTT TTTAGCGGAG AATTTCATCT TTTCCTACAT GGGGCTGACG CTGTTCACCT TCCAGAATCA CGTCTTTAAC CCAACATTTG TCGTAGGAGC ATTCATTGCT ATTTTCTTGG GAAGAGCTGC CAATATTTAT CCCTTGTCTC TCTTACTTAA TTTGGGTAGA AGAAGTAAGA TTGGATCAAA TTTTCAACAC ATGATGATGT TTGCTGGTCT TCGTGGTGCA ATGGCATTTG CCTTGGCCAT TCGAGATACT GCCACTTATG CACGACAAAT GATGTTCAGC ACCACACTTC TGATCGTGTT TTTTACTGTG TGGGTATTTG GTGGTGGCAC CACTGCCATG CTGTCATGCC TGCATATAAG GGTTGGTGTT GATTCAGACC AAGAACATTT GGGTGTTCCT GACAACGAAA GGAGAACCAC CAAAGCAGAG AGTGCCTGGC TCTTTCGGAT GTGGTACAAC TTCGATCATA ACTATCTGAA GCCCCTGCTG ACCCACAGTG GGCCTCCTCT GACTACCACA CTCCCAGCCT GCTGTGGGCC AATCGCCAGG TGCCTGACCA GCCCCCAAGC ATATGAAAAC CAGGAGCAGT TGAAAGATGA TGACTCTGAT CTCATTCTCA ATGATGGTGA TATCAGTCTG ACATATGGGG ATTCTACTGT GAACACCGAG TCCGCAACAG CCAGCGCCCC AAGGAGATTT ATGGGCAACA GTTCTGAAGA TGCCTTGGAC CGGGAGCTTA CATTTGGGGA CCACGAACTA GTCATTCGTG GCACACGCCT GGTTCTTCCG ATGGATGATT CTGAACCTGC GTTAAATTCA TTAGATGATA CGAGACACAG TCCGGCCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu04051
Clone ID Related Accession (Same CDS sequence)
NM_172780.3
, NM_172780.4
Accession Version
NM_172780.3
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2109bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2017-05-06
Organism
Mus musculus(House mouse)
Product
sodium/hydrogen exchanger 6
Comment
VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY137460.1, BC130221.1, AK028350.1 and BE197183.1. On Oct 24, 2009 this sequence version replaced NM_172780.2.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR1660811.109228.1, SRR1660815.7111.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 ATGGCTGGGG CTCGGCGCGG CTGGCGGCTG GCGCCCGTTC GCCGTGGCGT CTGCGGGCCC CGGGCGCGTC CGCTCATGCG GCCCCTTTGG TTGCTCTTCG CAGTGAGCTT CTTTGGCTGG ACCGGGGCTC TGGACGGCTC CGGGGGAACG ACCAGAGCCA TGGACGAGGA GATCGTGTCC GAGAAGCAGG CGGAGGAGAG CCATCGGCAG GACAGCGCCA ACCTGCTCAT CTTCATCCTG CTGCTCACCC TCACCATTCT GACGATCTGG CTCTTCAAGC ACCGCCGGGC CCGCTTCCTG CACGAAACCG GCCTTGCTAT GATTTATGGT CTTTTGGTAG GCCTCGTGCT TCGGTACGGC ATTCATGTTC CAAGCGATGT GAATAATGTG ACTCTGAGCT GTGAAGTGCA GTCAAGTCCA ACTACCTTGT TGGTCAACGT CAGTGGAAAA TTTTATGAGT ATACGCTGAA AGGAGAGATT AGCTCACATG AACTCAACAA TGTTCAAGAT AATGAAATGC TTAGGAAGGT TACTTTTGAT CCAGAAGTCT TTTTCAACAT ACTGCTTCCT CCTATCATAT TTTATGCAGG GTACAGTCTC AAAAGGAGAC ATTTCTTCCG GAACCTTGGG TCTATCTTAG CATATGCCTT TCTTGGAACA GCAATTTCTT GTTTCGTTAT TGGGTCCATC ATGTATGGCT GTGTAACCCT GATGAAGGTG ACCGGGCAGC TCGCGGGAGA TTTTTACTTT ACAGATTGCT TGCTGTTTGG TGCCATTGTT TCAGCCACCG ACCCAGTGAC TGTTCTTGCC ATCTTCCATG AGCTTCAAGT TGACGTTGAA CTCTACGCTC TTCTCTTCGG GGAAAGTGTC CTCAATGACG CGGTTGCCAT AGTGCTGTCC TCCTCAATAG TGGCATACCA GCCAGCGGGA GACAACAGCC ACACCTTTGA CGTTACAGCC ATGTTCAAAT CTATTGGAAT CTTCCTTGGG ATCTTCAGTG GATCTTTTGC AATGGGTGCT GCAACAGGCG TGGTAACAGC TTTAGTGACA AAGTTCACAA AGCTGAGAGA GTTCCAGCTG TTGGAGACAG GCCTTTTCTT CTTGATGTCC TGGAGCACCT TTCTTCTGGC TGAAGCATGG GGTTTCACAG GTGTGGTTGC AGTATTGTTT TGTGGCATCA CACAAGCACA TTACACGTAC AATAATTTGT CTACAGAGTC TCAGCATAGA ACAAAGCAGT TGTTTGAGCT TCTCAATTTT TTAGCGGAGA ATTTCATCTT TTCCTACATG GGGCTGACGC TGTTCACCTT CCAGAATCAC GTCTTTAACC CAACATTTGT CGTAGGAGCA TTCATTGCTA TTTTCTTGGG AAGAGCTGCC AATATTTATC CCTTGTCTCT CTTACTTAAT TTGGGTAGAA GAAGTAAGAT TGGATCAAAT TTTCAACACA TGATGATGTT TGCTGGTCTT CGTGGTGCAA TGGCATTTGC CTTGGCCATT CGAGATACTG CCACTTATGC ACGACAAATG ATGTTCAGCA CCACACTTCT GATCGTGTTT TTTACTGTGT GGGTATTTGG TGGTGGCACC ACTGCCATGC TGTCATGCCT GCATATAAGG GTTGGTGTTG ATTCAGACCA AGAACATTTG GGTGTTCCTG ACAACGAAAG GAGAACCACC AAAGCAGAGA GTGCCTGGCT CTTTCGGATG TGGTACAACT TCGATCATAA CTATCTGAAG CCCCTGCTGA CCCACAGTGG GCCTCCTCTG ACTACCACAC TCCCAGCCTG CTGTGGGCCA ATCGCCAGGT GCCTGACCAG CCCCCAAGCA TATGAAAACC AGGAGCAGTT GAAAGATGAT GACTCTGATC TCATTCTCAA TGATGGTGAT ATCAGTCTGA CATATGGGGA TTCTACTGTG AACACCGAGT CCGCAACAGC CAGCGCCCCA AGGAGATTTA TGGGCAACAG TTCTGAAGAT GCCTTGGACC GGGAGCTTAC ATTTGGGGAC CACGAACTAG TCATTCGTGG CACACGCCTG GTTCTTCCGA TGGATGATTC TGAACCTGCG TTAAATTCAT TAGATGATAC GAGACACAGT CCGGCCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_766368.2
CDS 26..2134
Translation
Target ORF information:
RefSeq Version NM_172780.3
Organism Mus musculus(House mouse)
Definition Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 6 (Slc9a6), mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_172780.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 ATGGCTGGGG CTCGGCGCGG CTGGCGGCTG GCGCCCGTTC GCCGTGGCGT CTGCGGGCCC CGGGCGCGTC CGCTCATGCG GCCCCTTTGG TTGCTCTTCG CAGTGAGCTT CTTTGGCTGG ACCGGGGCTC TGGACGGCTC CGGGGGAACG ACCAGAGCCA TGGACGAGGA GATCGTGTCC GAGAAGCAGG CGGAGGAGAG CCATCGGCAG GACAGCGCCA ACCTGCTCAT CTTCATCCTG CTGCTCACCC TCACCATTCT GACGATCTGG CTCTTCAAGC ACCGCCGGGC CCGCTTCCTG CACGAAACCG GCCTTGCTAT GATTTATGGT CTTTTGGTAG GCCTCGTGCT TCGGTACGGC ATTCATGTTC CAAGCGATGT GAATAATGTG ACTCTGAGCT GTGAAGTGCA GTCAAGTCCA ACTACCTTGT TGGTCAACGT CAGTGGAAAA TTTTATGAGT ATACGCTGAA AGGAGAGATT AGCTCACATG AACTCAACAA TGTTCAAGAT AATGAAATGC TTAGGAAGGT TACTTTTGAT CCAGAAGTCT TTTTCAACAT ACTGCTTCCT CCTATCATAT TTTATGCAGG GTACAGTCTC AAAAGGAGAC ATTTCTTCCG GAACCTTGGG TCTATCTTAG CATATGCCTT TCTTGGAACA GCAATTTCTT GTTTCGTTAT TGGGTCCATC ATGTATGGCT GTGTAACCCT GATGAAGGTG ACCGGGCAGC TCGCGGGAGA TTTTTACTTT ACAGATTGCT TGCTGTTTGG TGCCATTGTT TCAGCCACCG ACCCAGTGAC TGTTCTTGCC ATCTTCCATG AGCTTCAAGT TGACGTTGAA CTCTACGCTC TTCTCTTCGG GGAAAGTGTC CTCAATGACG CGGTTGCCAT AGTGCTGTCC TCCTCAATAG TGGCATACCA GCCAGCGGGA GACAACAGCC ACACCTTTGA CGTTACAGCC ATGTTCAAAT CTATTGGAAT CTTCCTTGGG ATCTTCAGTG GATCTTTTGC AATGGGTGCT GCAACAGGCG TGGTAACAGC TTTAGTGACA AAGTTCACAA AGCTGAGAGA GTTCCAGCTG TTGGAGACAG GCCTTTTCTT CTTGATGTCC TGGAGCACCT TTCTTCTGGC TGAAGCATGG GGTTTCACAG GTGTGGTTGC AGTATTGTTT TGTGGCATCA CACAAGCACA TTACACGTAC AATAATTTGT CTACAGAGTC TCAGCATAGA ACAAAGCAGT TGTTTGAGCT TCTCAATTTT TTAGCGGAGA ATTTCATCTT TTCCTACATG GGGCTGACGC TGTTCACCTT CCAGAATCAC GTCTTTAACC CAACATTTGT CGTAGGAGCA TTCATTGCTA TTTTCTTGGG AAGAGCTGCC AATATTTATC CCTTGTCTCT CTTACTTAAT TTGGGTAGAA GAAGTAAGAT TGGATCAAAT TTTCAACACA TGATGATGTT TGCTGGTCTT CGTGGTGCAA TGGCATTTGC CTTGGCCATT CGAGATACTG CCACTTATGC ACGACAAATG ATGTTCAGCA CCACACTTCT GATCGTGTTT TTTACTGTGT GGGTATTTGG TGGTGGCACC ACTGCCATGC TGTCATGCCT GCATATAAGG GTTGGTGTTG ATTCAGACCA AGAACATTTG GGTGTTCCTG ACAACGAAAG GAGAACCACC AAAGCAGAGA GTGCCTGGCT CTTTCGGATG TGGTACAACT TCGATCATAA CTATCTGAAG CCCCTGCTGA CCCACAGTGG GCCTCCTCTG ACTACCACAC TCCCAGCCTG CTGTGGGCCA ATCGCCAGGT GCCTGACCAG CCCCCAAGCA TATGAAAACC AGGAGCAGTT GAAAGATGAT GACTCTGATC TCATTCTCAA TGATGGTGAT ATCAGTCTGA CATATGGGGA TTCTACTGTG AACACCGAGT CCGCAACAGC CAGCGCCCCA AGGAGATTTA TGGGCAACAG TTCTGAAGAT GCCTTGGACC GGGAGCTTAC ATTTGGGGAC CACGAACTAG TCATTCGTGG CACACGCCTG GTTCTTCCGA TGGATGATTC TGAACCTGCG TTAAATTCAT TAGATGATAC GAGACACAGT CCGGCCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu04051
Clone ID Related Accession (Same CDS sequence)
NM_172780.3
, NM_172780.4
Accession Version
NM_172780.4 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2109bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-03-03
Organism
Mus musculus(house mouse)
Product
sodium/hydrogen exchanger 6 isoform 1
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY137460.1, BC130221.1, AK028350.1 and BE197183.1. On Dec 12, 2017 this sequence version replaced NM_172780.3.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR1660811.109228.1, SRR1660815.7111.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 ATGGCTGGGG CTCGGCGCGG CTGGCGGCTG GCGCCCGTTC GCCGTGGCGT CTGCGGGCCC CGGGCGCGTC CGCTCATGCG GCCCCTTTGG TTGCTCTTCG CAGTGAGCTT CTTTGGCTGG ACCGGGGCTC TGGACGGCTC CGGGGGAACG ACCAGAGCCA TGGACGAGGA GATCGTGTCC GAGAAGCAGG CGGAGGAGAG CCATCGGCAG GACAGCGCCA ACCTGCTCAT CTTCATCCTG CTGCTCACCC TCACCATTCT GACGATCTGG CTCTTCAAGC ACCGCCGGGC CCGCTTCCTG CACGAAACCG GCCTTGCTAT GATTTATGGT CTTTTGGTAG GCCTCGTGCT TCGGTACGGC ATTCATGTTC CAAGCGATGT GAATAATGTG ACTCTGAGCT GTGAAGTGCA GTCAAGTCCA ACTACCTTGT TGGTCAACGT CAGTGGAAAA TTTTATGAGT ATACGCTGAA AGGAGAGATT AGCTCACATG AACTCAACAA TGTTCAAGAT AATGAAATGC TTAGGAAGGT TACTTTTGAT CCAGAAGTCT TTTTCAACAT ACTGCTTCCT CCTATCATAT TTTATGCAGG GTACAGTCTC AAAAGGAGAC ATTTCTTCCG GAACCTTGGG TCTATCTTAG CATATGCCTT TCTTGGAACA GCAATTTCTT GTTTCGTTAT TGGGTCCATC ATGTATGGCT GTGTAACCCT GATGAAGGTG ACCGGGCAGC TCGCGGGAGA TTTTTACTTT ACAGATTGCT TGCTGTTTGG TGCCATTGTT TCAGCCACCG ACCCAGTGAC TGTTCTTGCC ATCTTCCATG AGCTTCAAGT TGACGTTGAA CTCTACGCTC TTCTCTTCGG GGAAAGTGTC CTCAATGACG CGGTTGCCAT AGTGCTGTCC TCCTCAATAG TGGCATACCA GCCAGCGGGA GACAACAGCC ACACCTTTGA CGTTACAGCC ATGTTCAAAT CTATTGGAAT CTTCCTTGGG ATCTTCAGTG GATCTTTTGC AATGGGTGCT GCAACAGGCG TGGTAACAGC TTTAGTGACA AAGTTCACAA AGCTGAGAGA GTTCCAGCTG TTGGAGACAG GCCTTTTCTT CTTGATGTCC TGGAGCACCT TTCTTCTGGC TGAAGCATGG GGTTTCACAG GTGTGGTTGC AGTATTGTTT TGTGGCATCA CACAAGCACA TTACACGTAC AATAATTTGT CTACAGAGTC TCAGCATAGA ACAAAGCAGT TGTTTGAGCT TCTCAATTTT TTAGCGGAGA ATTTCATCTT TTCCTACATG GGGCTGACGC TGTTCACCTT CCAGAATCAC GTCTTTAACC CAACATTTGT CGTAGGAGCA TTCATTGCTA TTTTCTTGGG AAGAGCTGCC AATATTTATC CCTTGTCTCT CTTACTTAAT TTGGGTAGAA GAAGTAAGAT TGGATCAAAT TTTCAACACA TGATGATGTT TGCTGGTCTT CGTGGTGCAA TGGCATTTGC CTTGGCCATT CGAGATACTG CCACTTATGC ACGACAAATG ATGTTCAGCA CCACACTTCT GATCGTGTTT TTTACTGTGT GGGTATTTGG TGGTGGCACC ACTGCCATGC TGTCATGCCT GCATATAAGG GTTGGTGTTG ATTCAGACCA AGAACATTTG GGTGTTCCTG ACAACGAAAG GAGAACCACC AAAGCAGAGA GTGCCTGGCT CTTTCGGATG TGGTACAACT TCGATCATAA CTATCTGAAG CCCCTGCTGA CCCACAGTGG GCCTCCTCTG ACTACCACAC TCCCAGCCTG CTGTGGGCCA ATCGCCAGGT GCCTGACCAG CCCCCAAGCA TATGAAAACC AGGAGCAGTT GAAAGATGAT GACTCTGATC TCATTCTCAA TGATGGTGAT ATCAGTCTGA CATATGGGGA TTCTACTGTG AACACCGAGT CCGCAACAGC CAGCGCCCCA AGGAGATTTA TGGGCAACAG TTCTGAAGAT GCCTTGGACC GGGAGCTTAC ATTTGGGGAC CACGAACTAG TCATTCGTGG CACACGCCTG GTTCTTCCGA TGGATGATTC TGAACCTGCG TTAAATTCAT TAGATGATAC GAGACACAGT CCGGCCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_766368.2
CDS 26..2134
Translation
Target ORF information:
RefSeq Version NM_172780.4
Organism Mus musculus(house mouse)
Definition Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 6 (Slc9a6), transcript variant 1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_172780.4
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 ATGGCTGGGG CTCGGCGCGG CTGGCGGCTG GCGCCCGTTC GCCGTGGCGT CTGCGGGCCC CGGGCGCGTC CGCTCATGCG GCCCCTTTGG TTGCTCTTCG CAGTGAGCTT CTTTGGCTGG ACCGGGGCTC TGGACGGCTC CGGGGGAACG ACCAGAGCCA TGGACGAGGA GATCGTGTCC GAGAAGCAGG CGGAGGAGAG CCATCGGCAG GACAGCGCCA ACCTGCTCAT CTTCATCCTG CTGCTCACCC TCACCATTCT GACGATCTGG CTCTTCAAGC ACCGCCGGGC CCGCTTCCTG CACGAAACCG GCCTTGCTAT GATTTATGGT CTTTTGGTAG GCCTCGTGCT TCGGTACGGC ATTCATGTTC CAAGCGATGT GAATAATGTG ACTCTGAGCT GTGAAGTGCA GTCAAGTCCA ACTACCTTGT TGGTCAACGT CAGTGGAAAA TTTTATGAGT ATACGCTGAA AGGAGAGATT AGCTCACATG AACTCAACAA TGTTCAAGAT AATGAAATGC TTAGGAAGGT TACTTTTGAT CCAGAAGTCT TTTTCAACAT ACTGCTTCCT CCTATCATAT TTTATGCAGG GTACAGTCTC AAAAGGAGAC ATTTCTTCCG GAACCTTGGG TCTATCTTAG CATATGCCTT TCTTGGAACA GCAATTTCTT GTTTCGTTAT TGGGTCCATC ATGTATGGCT GTGTAACCCT GATGAAGGTG ACCGGGCAGC TCGCGGGAGA TTTTTACTTT ACAGATTGCT TGCTGTTTGG TGCCATTGTT TCAGCCACCG ACCCAGTGAC TGTTCTTGCC ATCTTCCATG AGCTTCAAGT TGACGTTGAA CTCTACGCTC TTCTCTTCGG GGAAAGTGTC CTCAATGACG CGGTTGCCAT AGTGCTGTCC TCCTCAATAG TGGCATACCA GCCAGCGGGA GACAACAGCC ACACCTTTGA CGTTACAGCC ATGTTCAAAT CTATTGGAAT CTTCCTTGGG ATCTTCAGTG GATCTTTTGC AATGGGTGCT GCAACAGGCG TGGTAACAGC TTTAGTGACA AAGTTCACAA AGCTGAGAGA GTTCCAGCTG TTGGAGACAG GCCTTTTCTT CTTGATGTCC TGGAGCACCT TTCTTCTGGC TGAAGCATGG GGTTTCACAG GTGTGGTTGC AGTATTGTTT TGTGGCATCA CACAAGCACA TTACACGTAC AATAATTTGT CTACAGAGTC TCAGCATAGA ACAAAGCAGT TGTTTGAGCT TCTCAATTTT TTAGCGGAGA ATTTCATCTT TTCCTACATG GGGCTGACGC TGTTCACCTT CCAGAATCAC GTCTTTAACC CAACATTTGT CGTAGGAGCA TTCATTGCTA TTTTCTTGGG AAGAGCTGCC AATATTTATC CCTTGTCTCT CTTACTTAAT TTGGGTAGAA GAAGTAAGAT TGGATCAAAT TTTCAACACA TGATGATGTT TGCTGGTCTT CGTGGTGCAA TGGCATTTGC CTTGGCCATT CGAGATACTG CCACTTATGC ACGACAAATG ATGTTCAGCA CCACACTTCT GATCGTGTTT TTTACTGTGT GGGTATTTGG TGGTGGCACC ACTGCCATGC TGTCATGCCT GCATATAAGG GTTGGTGTTG ATTCAGACCA AGAACATTTG GGTGTTCCTG ACAACGAAAG GAGAACCACC AAAGCAGAGA GTGCCTGGCT CTTTCGGATG TGGTACAACT TCGATCATAA CTATCTGAAG CCCCTGCTGA CCCACAGTGG GCCTCCTCTG ACTACCACAC TCCCAGCCTG CTGTGGGCCA ATCGCCAGGT GCCTGACCAG CCCCCAAGCA TATGAAAACC AGGAGCAGTT GAAAGATGAT GACTCTGATC TCATTCTCAA TGATGGTGAT ATCAGTCTGA CATATGGGGA TTCTACTGTG AACACCGAGT CCGCAACAGC CAGCGCCCCA AGGAGATTTA TGGGCAACAG TTCTGAAGAT GCCTTGGACC GGGAGCTTAC ATTTGGGGAC CACGAACTAG TCATTCGTGG CACACGCCTG GTTCTTCCGA TGGATGATTC TGAACCTGCG TTAAATTCAT TAGATGATAC GAGACACAGT CCGGCCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
Mixed Neurodevelopmental and Neurodegenerative Pathology in
eNeuro4(6)(2017 Nov-Dec)
Xu M,Ouyang Q,Gong J,Pescosolido MF,Pruett BS,Mishra S,Schmidt M,Jones RN,Gamsiz Uzun ED,Lizarraga SB,Morrow EM