Gene Symbol | Ocrl |
Entrez Gene ID | 320634 |
Full Name | OCRL, inositol polyphosphate-5-phosphatase |
Synonyms | 9530014D17Rik,BB143339,OCRL1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Ocrl cDNA ORF clone
Gene Symbol | Ocrl |
Entrez Gene ID | 320634 |
Full Name | OCRL, inositol polyphosphate-5-phosphatase |
Synonyms | 9530014D17Rik,BB143339,OCRL1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_011251008.2 | XP_011249310.1 | inositol polyphosphate 5-phosphatase OCRL-1 isoform X1 |
NM_177215.3 | NP_796189.2 | inositol polyphosphate 5-phosphatase OCRL |
XM_017318524.2 | XP_017174013.1 | inositol polyphosphate 5-phosphatase OCRL-1 isoform X2 |
XM_017318524.1 | XP_017174013.1 | inositol polyphosphate 5-phosphatase OCRL-1 isoform X2 |
XM_011251008.3 | XP_011249310.1 | inositol polyphosphate 5-phosphatase OCRL-1 isoform X1 |
Homo sapiens (human) | OCRL | NP_000267.2 |
Pan troglodytes (chimpanzee) | OCRL | XP_003317719.2 |
Rattus norvegicus (Norway rat) | Ocrl | NP_001101726.2 |
Canis lupus familiaris (dog) | OCRL | XP_852376.2 |
Mus musculus (house mouse) | Ocrl | NP_796189.2 |
Xenopus tropicalis (tropical clawed frog) | ocrl | XP_004919252.1 |
Gallus gallus (chicken) | OCRL | XP_004940632.1 |
Danio rerio (zebrafish) | LOC100329312 | XP_003199958.1 |
OCRL | XP_002806438.1 | |
Danio rerio (zebrafish) | ocrl | NP_001071232.1 |
Drosophila melanogaster (fruit fly) | Ocrl | NP_569962.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP010556 | XP_558090.3 |
Bos taurus (cattle) | OCRL | NP_001095661.1 |
ESRP1 Mutations Cause Hearing Loss due to Defects in Alternative Splicing that Disrupt Cochlear Development.
Rohacek AM, Bebee TW, Tilton RK, Radens CM, McDermott-Roe C, Peart N, Kaur M, Zaykaner M, Cieply B, Musunuru K, Barash Y, Germiller JA, Krantz ID, Carstens RP, Epstein DJ
Developmental cell43(3)318-331.e5(2017 11)
Kidney Tubular Ablation of
Inoue K, Balkin DM, Liu L, Nandez R, Wu Y, Tian X, Wang T, Nussbaum R, De Camilli P, Ishibe S
Journal of the American Society of Nephrology : JASN28(5)1399-1407(2017 May)
Down-regulation of Rac GTPase-activating protein OCRL1 causes aberrant activation of Rac1 in osteoarthritis development.
Zhu S, Dai J, Liu H, Cong X, Chen Y, Wu Y, Hu H, Heng BC, Ouyang HW, Zhou Y
Arthritis & rheumatology (Hoboken, N.J.)67(8)2154-63(2015 May)
Primary cilia signaling mediates intraocular pressure sensation.
Luo N, Conwell MD, Chen X, Kettenhofen CI, Westlake CJ, Cantor LB, Wells CD, Weinreb RN, Corson TW, Spandau DF, Joos KM, Iomini C, Obukhov AG, Sun Y
Proceedings of the National Academy of Sciences of the United States of America111(35)12871-6(2014 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
These results suggest that the functions of OCRL/INPP5B and proton-chloride exchange transporter 5 converge on shared mechanisms, the impairment of which has a dramatic effect on proximal tubule endocytosis
Title: Kidney Tubular Ablation of
OCRL mRNA and protein were downregulated in osteoarthritis knee cartilage. OCRL inhibits Rac1 activation in OA.
Title: Down-regulation of Rac GTPase-activating protein OCRL1 causes aberrant activation of Rac1 in osteoarthritis development.
Implications of OCRL and TRPV4 in primary cilia function may also shed light on mechanosensation in other organ systems.
Title: Primary cilia signaling mediates intraocular pressure sensation.
Bcl10 was required to locally deliver the vesicular OCRL phosphatase that regulates PI(4,5)P(2) and F-actin turnover, both crucial for the completion of phagosome closure.
Title: The NF-?B signaling protein Bcl10 regulates actin dynamics by controlling AP1 and OCRL-bearing vesicles.
These results indicate a functional overlap of Ocrl and Inpp5b in most cell lineages, especially in extraembryonic tissues.
Title: X-inactivation analysis of embryonic lethality in Ocrl wt/-; Inpp5b-/- mice.
The following Ocrl gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ocrl cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu74679 | |
Clone ID Related Accession (Same CDS sequence) | XM_011251008.2 , XM_011251008.3 | |
Accession Version | XM_011251008.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2700bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | inositol polyphosphate 5-phosphatase OCRL-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000086.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011251008.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCGC GGCTCCCGAT TGGAGCTCAG CCCCTGGCAA TGGTGGCGGG TTTGGAGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011249310.1 |
CDS | 253..2952 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011251008.2 |
1 | ATGGAGCCGC GGCTCCCGAT TGGAGCTCAG CCCCTGGCAA TGGTGGCGGG TTTGGAGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu06080 | |
Clone ID Related Accession (Same CDS sequence) | NM_177215.3 | |
Accession Version | NM_177215.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2703bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-10 | |
Organism | Mus musculus(house mouse) | |
Product | inositol polyphosphate 5-phosphatase OCRL | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC068146.1. On Apr 5, 2004 this sequence version replaced NM_177215.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC068146.1, AK041963.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849381, SAMN00849382 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCCGC GGCTCCCGAT TGGAGCTCAG CCCCTGGCAA TGGTGGCGGG TTTGGAGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_796189.2 |
CDS | 198..2900 |
Translation |
Target ORF information:
Target ORF information:
|
NM_177215.3 |
1 | ATGGAGCCGC GGCTCCCGAT TGGAGCTCAG CCCCTGGCAA TGGTGGCGGG TTTGGAGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu74679 | |
Clone ID Related Accession (Same CDS sequence) | XM_011251008.2 , XM_011251008.3 | |
Accession Version | XM_011251008.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2700bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | inositol polyphosphate 5-phosphatase OCRL-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000086.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_011251008.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCGC GGCTCCCGAT TGGAGCTCAG CCCCTGGCAA TGGTGGCGGG TTTGGAGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011249310.1 |
CDS | 236..2935 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011251008.3 |
1 | ATGGAGCCGC GGCTCCCGAT TGGAGCTCAG CCCCTGGCAA TGGTGGCGGG TTTGGAGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu83139 | |
Clone ID Related Accession (Same CDS sequence) | XM_017318524.2 , XM_017318524.1 | |
Accession Version | XM_017318524.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2679bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | inositol polyphosphate 5-phosphatase OCRL-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000086.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_017318524.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCGC GGCTCCCGAT TGGAGCTCAG CCCCTGGCAA TGGTGGCGGG TTTGGAGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017174013.1 |
CDS | 236..2914 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017318524.2 |
1 | ATGGAGCCGC GGCTCCCGAT TGGAGCTCAG CCCCTGGCAA TGGTGGCGGG TTTGGAGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu83139 | |
Clone ID Related Accession (Same CDS sequence) | XM_017318524.2 , XM_017318524.1 | |
Accession Version | XM_017318524.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2679bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | inositol polyphosphate 5-phosphatase OCRL-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000086.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCGC GGCTCCCGAT TGGAGCTCAG CCCCTGGCAA TGGTGGCGGG TTTGGAGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017174013.1 |
CDS | 253..2931 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017318524.1 |
1 | ATGGAGCCGC GGCTCCCGAT TGGAGCTCAG CCCCTGGCAA TGGTGGCGGG TTTGGAGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
ESRP1 Mutations Cause Hearing Loss due to Defects in Alternative Splicing that Disrupt Cochlear Development. |
Kidney Tubular Ablation of |
Down-regulation of Rac GTPase-activating protein OCRL1 causes aberrant activation of Rac1 in osteoarthritis development. |
Primary cilia signaling mediates intraocular pressure sensation. |