Gene Symbol | Zfp386 |
Entrez Gene ID | 56220 |
Full Name | zinc finger protein 386 (Kruppel-like) |
Synonyms | Kzf1,mKIAA4205 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Zfp386 cDNA ORF clone
Gene Symbol | Zfp386 |
Entrez Gene ID | 56220 |
Full Name | zinc finger protein 386 (Kruppel-like) |
Synonyms | Kzf1,mKIAA4205 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_011244150.2 | XP_011242452.1 | zinc finger protein 386 (Kruppel-like) isoform X2 |
NM_001004066.3 | NP_001004066.1 | zinc finger protein 386 (Kruppel-like) isoform a |
XM_011244149.2 | XP_011242451.1 | zinc finger protein 386 (Kruppel-like) isoform X1 |
NM_019565.4 | NP_062511.2 | zinc finger protein 386 (Kruppel-like) isoform b |
NM_001286214.1 | NP_001273143.1 | zinc finger protein 386 (Kruppel-like) isoform c |
XM_011244149.3 | XP_011242451.1 | zinc finger protein 386 (Kruppel-like) isoform X1 |
XM_011244150.3 | XP_011242452.1 | zinc finger protein 386 (Kruppel-like) isoform X2 |
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.
Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND, Robson P
Developmental cell18(4)675-85(2010 Apr)
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S, Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N, Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y, Okado H, Hashimoto M, Asahara H
Developmental cell17(6)836-48(2009 Dec)
Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives.
Tamplin OJ, Kinzel D, Cox BJ, Bell CE, Rossant J, Lickert H
BMC genomics9511(2008 Oct)
Identification of potential nuclear reprogramming and differentiation factors by a novel selection method for cloning chromatin-binding proteins.
Wang L, Zheng A, Yi L, Xu C, Ding M, Deng H
Biochemical and biophysical research communications325(1)302-7(2004 Dec)
Genomic analysis of mouse retinal development.
Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong WH, Cepko CL
PLoS biology2(9)E247(2004 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Zfp386 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Zfp386 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu09209 | |
Clone ID Related Accession (Same CDS sequence) | NM_001286214.1 | |
Accession Version | NM_001286214.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 153bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-25 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 386 (Kruppel-like) isoform c | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ140586.1, BE652367.1 and AC243430.3. Transcript Variant: This variant (3) has an alternate splice site in the coding region, which results in a reading frame shift, compared to variant 1. The resulting isoform (c) is shorter and has a distinct C-terminus, compared to isoform a. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BI149350.1, BE652367.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGATGG AGCAGTTGAC CTTCCGCGAC GTGGCCGTTG ACTTCTCTCC GGATGAGTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001273143.1 |
CDS | 135..287 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001286214.1 |
1 | ATGGAGATGG AGCAGTTGAC CTTCCGCGAC GTGGCCGTTG ACTTCTCTCC GGATGAGTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu69623 | |
Clone ID Related Accession (Same CDS sequence) | XM_011244150.2 , XM_011244150.3 | |
Accession Version | XM_011244150.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1065bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 386 (Kruppel-like) isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_011244150.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATAAGG AAATTAGCAA AGGTTTTAGT AGTGGATCTT TACTAAATAG TTGCAATGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011242452.1 |
CDS | 825..1889 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011244150.3 |
1 | ATGTATAAGG AAATTAGCAA AGGTTTTAGT AGTGGATCTT TACTAAATAG TTGCAATGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu69622 | |
Clone ID Related Accession (Same CDS sequence) | XM_011244149.2 , XM_011244149.3 | |
Accession Version | XM_011244149.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1674bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 386 (Kruppel-like) isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_011244149.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTAGAGA ACTACAGAAA CCTGGTCTCT GTGGCTCTTT CTCATCATTG TACCCAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011242451.1 |
CDS | 419..2092 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011244149.3 |
1 | ATGGTAGAGA ACTACAGAAA CCTGGTCTCT GTGGCTCTTT CTCATCATTG TACCCAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10584 | |
Clone ID Related Accession (Same CDS sequence) | NM_001004066.3 | |
Accession Version | NM_001004066.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1881bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-25 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 386 (Kruppel-like) isoform a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ140586.1, CF723896.1 and AC243430.3. On Oct 31, 2013 this sequence version replaced NM_001004066.2. Transcript Variant: This variant (1) encodes the longest isoform (a). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK220544.1, BC004747.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849383, SAMN00849384 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGATGG AGCAGTTGAC CTTCCGCGAC GTGGCCGTTG ACTTCTCTCC GGATGAGTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001004066.1 |
CDS | 135..2015 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001004066.3 |
1 | ATGGAGATGG AGCAGTTGAC CTTCCGCGAC GTGGCCGTTG ACTTCTCTCC GGATGAGTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu11219 | |
Clone ID Related Accession (Same CDS sequence) | NM_019565.4 | |
Accession Version | NM_019565.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1776bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-25 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 386 (Kruppel-like) isoform b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ140586.1, AK165544.1 and AC243430.3. On Nov 1, 2013 this sequence version replaced NM_019565.3. Transcript Variant: This variant (2) has an alternate splice site in the coding region but maintains the reading frame, compared to variant 1. The resulting isoform (b) lacks an internal segment, compared to isoform a. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK165544.1, SRR1660817.167332.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGATGG AGCAGTTGAC CTTCCGCGAC GTGGCCGTTG ACTTCTCTCC GGATGAGTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_062511.2 |
CDS | 135..1910 |
Translation |
Target ORF information:
Target ORF information:
|
NM_019565.4 |
1 | ATGGAGATGG AGCAGTTGAC CTTCCGCGAC GTGGCCGTTG ACTTCTCTCC GGATGAGTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu69622 | |
Clone ID Related Accession (Same CDS sequence) | XM_011244149.2 , XM_011244149.3 | |
Accession Version | XM_011244149.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1674bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 386 (Kruppel-like) isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011244149.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTAGAGA ACTACAGAAA CCTGGTCTCT GTGGCTCTTT CTCATCATTG TACCCAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011242451.1 |
CDS | 426..2099 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011244149.2 |
1 | ATGGTAGAGA ACTACAGAAA CCTGGTCTCT GTGGCTCTTT CTCATCATTG TACCCAGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu69623 | |
Clone ID Related Accession (Same CDS sequence) | XM_011244150.2 , XM_011244150.3 | |
Accession Version | XM_011244150.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1065bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 386 (Kruppel-like) isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011244150.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATAAGG AAATTAGCAA AGGTTTTAGT AGTGGATCTT TACTAAATAG TTGCAATGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011242452.1 |
CDS | 832..1896 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011244150.2 |
1 | ATGTATAAGG AAATTAGCAA AGGTTTTAGT AGTGGATCTT TACTAAATAG TTGCAATGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. |
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. |
Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives. |
Identification of potential nuclear reprogramming and differentiation factors by a novel selection method for cloning chromatin-binding proteins. |
Genomic analysis of mouse retinal development. |