Gene Symbol | Abhd11 |
Entrez Gene ID | 68758 |
Full Name | abhydrolase domain containing 11 |
Synonyms | 1110054D16Rik,A630008N09Rik,Wbscr21 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Abhd11 cDNA ORF clone
Gene Symbol | Abhd11 |
Entrez Gene ID | 68758 |
Full Name | abhydrolase domain containing 11 |
Synonyms | 1110054D16Rik,A630008N09Rik,Wbscr21 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006504492.4 | XP_006504555.1 | protein ABHD11 isoform X1 |
NM_145215.2 | NP_660250.1 | protein ABHD11 isoform 1 |
XM_006504492.3 | XP_006504555.1 | protein ABHD11 isoform X1 |
NM_001190437.1 | NP_001177366.1 | protein ABHD11 isoform 2 |
XM_017321086.1 | XP_017176575.1 | protein ABHD11 isoform X2 |
LOC720147 | XP_001115218.2 | |
Eremothecium gossypii | AGOS_ACL180C | NP_983224.2 |
Magnaporthe oryzae (rice blast fungus) | MGG_16211 | XP_003709657.1 |
Pan troglodytes (chimpanzee) | ABHD11 | XP_001147903.1 |
Canis lupus familiaris (dog) | ABHD11 | XP_546921.1 |
Bos taurus (cattle) | ABHD11 | NP_001029544.1 |
Mus musculus (house mouse) | Abhd11 | NP_660250.1 |
Kluyveromyces lactis | KLLA0B05863g | XP_451797.1 |
Xenopus tropicalis (tropical clawed frog) | abhd11 | NP_001122119.2 |
Homo sapiens (human) | ABHD11 | NP_683710.1 |
Rattus norvegicus (Norway rat) | Abhd11 | NP_001258109.1 |
Gallus gallus (chicken) | ABHD11 | XP_415721.4 |
Danio rerio (zebrafish) | abhd11 | NP_001004290.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP009289 | XP_320086.3 |
Saccharomyces cerevisiae (baker's yeast) | IMO32 | NP_011545.1 |
Neurospora crassa | NCU01454 | XP_955842.1 |
Drosophila melanogaster (fruit fly) | CG2059 | NP_572388.1 |
Caenorhabditis elegans (roundworm) | R05D7.4 | NP_493077.1 |
Caenorhabditis elegans (roundworm) | F32B4.6 | NP_492942.1 |
Schizosaccharomyces pombe (fission yeast) | SPAC22H12.03 | NP_593115.1 |
Striatal long noncoding RNA Abhd11os is neuroprotective against an N-terminal fragment of mutant huntingtin in vivo.
Francelle L, Galvan L, Gaillard MC, Petit F, Bernay B, Guillermier M, Bonvento G, Dufour N, Elalouf JM, Hantraye P, D?glon N, de Chald?e M, Brouillet E
Neurobiology of aging36(3)1601.e7-16(2015 Mar)
Effects of rosiglitazone and high fat diet on lipase/esterase expression in adipose tissue.
Shen WJ, Patel S, Yu Z, Jue D, Kraemer FB
Biochimica et biophysica acta1771(2)177-84(2007 Feb)
Identification of additional transcripts in the Williams-Beuren syndrome critical region.
Merla G, Ucla C, Guipponi M, Reymond A
Human genetics110(5)429-38(2002 May)
Generation and comparative analysis of approximately 3.3 Mb of mouse genomic sequence orthologous to the region of human chromosome 7q11.23 implicated in Williams syndrome.
DeSilva U, Elnitski L, Idol JR, Doyle JL, Gan W, Thomas JW, Schwartz S, Dietrich NL, Beckstrom-Sternberg SM, McDowell JC, Blakesley RW, Bouffard GG, Thomas PJ, Touchman JW, Miller W, Green ED
Genome research12(1)3-15(2002 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
loss lncRNA Abhd11os likely contribute to striatal vulnerability in HD and lncRNA may play crucial roles in neurodegenerative diseases.
Title: Striatal long noncoding RNA Abhd11os is neuroprotective against an N-terminal fragment of mutant huntingtin in vivo.
The following Abhd11 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Abhd11 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu12846 | |
Clone ID Related Accession (Same CDS sequence) | NM_001190437.1 | |
Accession Version | NM_001190437.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 684bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-22 | |
Organism | Mus musculus(house mouse) | |
Product | protein ABHD11 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC084109.2. Transcript Variant: This variant (2) contains an alternate 5' exon and uses a downstream start codon, compared to variant 1. Isoform 2 has a shorter N-terminus, compared to isoform 1. Sequence Note: This RefSeq record was created from genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: CF617153.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: reported by MitoCarta ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGTTCAGA GGACTGGCCG GAGGGTGCTG ACGGTGGATG CCCGGAACCA CGGTGACAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001177366.1 |
CDS | 177..860 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001190437.1 |
1 | ATGGTTCAGA GGACTGGCCG GAGGGTGCTG ACGGTGGATG CCCGGAACCA CGGTGACAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu36189 | |
Clone ID Related Accession (Same CDS sequence) | XM_006504492.4 , XM_006504492.3 | |
Accession Version | XM_006504492.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 834bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | protein ABHD11 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006504492.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTCCGCT GGGCGCGAGC GTGGAGGGTC CCCCGTGGGG TACTCGGTGC CTCCTCTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006504555.1 |
CDS | 463..1296 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006504492.3 |
1 | ATGCTCCGCT GGGCGCGAGC GTGGAGGGTC CCCCGTGGGG TACTCGGTGC CTCCTCTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu16328 | |
Clone ID Related Accession (Same CDS sequence) | NM_145215.2 | |
Accession Version | NM_145215.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 924bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-27 | |
Organism | Mus musculus(house mouse) | |
Product | protein ABHD11 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC084109.2. On Jun 24, 2010 this sequence version replaced NM_145215.1. Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1). Sequence Note: This RefSeq record was created from genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AF412033.1, SRR1660819.333456.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: reported by MitoCarta ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCTCCGCT GGGCGCGAGC GTGGAGGGTC CCCCGTGGGG TACTCGGTGC CTCCTCTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_660250.1 |
CDS | 414..1337 |
Translation |
Target ORF information:
Target ORF information:
|
NM_145215.2 |
1 | ATGCTCCGCT GGGCGCGAGC GTGGAGGGTC CCCCGTGGGG TACTCGGTGC CTCCTCTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu36189 | |
Clone ID Related Accession (Same CDS sequence) | XM_006504492.4 , XM_006504492.3 | |
Accession Version | XM_006504492.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 834bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | protein ABHD11 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006504492.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTCCGCT GGGCGCGAGC GTGGAGGGTC CCCCGTGGGG TACTCGGTGC CTCCTCTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006504555.1 |
CDS | 458..1291 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006504492.4 |
1 | ATGCTCCGCT GGGCGCGAGC GTGGAGGGTC CCCCGTGGGG TACTCGGTGC CTCCTCTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu81481 | |
Clone ID Related Accession (Same CDS sequence) | XM_017321086.1 | |
Accession Version | XM_017321086.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 444bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | protein ABHD11 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTCCGCT GGGCGCGAGC GTGGAGGGTC CCCCGTGGGG TACTCGGTGC CTCCTCTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017176575.1 |
CDS | 466..909 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017321086.1 |
1 | ATGCTCCGCT GGGCGCGAGC GTGGAGGGTC CCCCGTGGGG TACTCGGTGC CTCCTCTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Striatal long noncoding RNA Abhd11os is neuroprotective against an N-terminal fragment of mutant huntingtin in vivo. |
Effects of rosiglitazone and high fat diet on lipase/esterase expression in adipose tissue. |
Identification of additional transcripts in the Williams-Beuren syndrome critical region. |
Generation and comparative analysis of approximately 3.3 Mb of mouse genomic sequence orthologous to the region of human chromosome 7q11.23 implicated in Williams syndrome. |