Gene Symbol | 4933434E20Rik |
Entrez Gene ID | 99650 |
Full Name | RIKEN cDNA 4933434E20 gene |
Synonyms | 5730552F22Rik,AI462154,NICE-3,NS5ATP4 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » 4933434E20Rik cDNA ORF clone
Gene Symbol | 4933434E20Rik |
Entrez Gene ID | 99650 |
Full Name | RIKEN cDNA 4933434E20 gene |
Synonyms | 5730552F22Rik,AI462154,NICE-3,NS5ATP4 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_025762.3 | NP_080038.1 | uncharacterized protein C1orf43 homolog isoform 1 |
NM_001287086.1 | NP_001274015.1 | uncharacterized protein C1orf43 homolog isoform 3 |
NM_027500.4 | NP_081776.2 | uncharacterized protein C1orf43 homolog isoform 2 |
NM_001287087.1 | NP_001274016.1 | uncharacterized protein C1orf43 homolog isoform 1 |
LOC716453 | XP_001114147.2 | |
Pan troglodytes (chimpanzee) | C1H1orf43 | XP_001150543.1 |
Gallus gallus (chicken) | C25H1ORF43 | NP_001026761.1 |
Homo sapiens (human) | C1orf43 | NP_001092086.1 |
Danio rerio (zebrafish) | zgc:123238 | NP_001032189.1 |
Drosophila melanogaster (fruit fly) | CG6665 | NP_725632.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004471 | XP_313770.4 |
Bos taurus (cattle) | C3H1orf43 | NP_001015666.1 |
Mus musculus (house mouse) | 4933434E20Rik | NP_001274016.1 |
Canis lupus familiaris (dog) | C7H1orf43 | XP_852286.1 |
Rattus norvegicus (Norway rat) | LOC361985 | NP_001014196.1 |
Xenopus tropicalis (tropical clawed frog) | c1orf43 | NP_001120063.1 |
A staging system for correct phenotype interpretation of mouse embryos harvested on embryonic day 14 (E14.5).
Geyer SH, Reissig L, Rose J, Wilson R, Prin F, Szumska D, Ramirez-Solis R, Tudor C, White J, Mohun TJ, Weninger WJ
Journal of anatomy230(5)710-719(2017 May)
Highly variable penetrance of abnormal phenotypes in embryonic lethal knockout mice.
Wilson R, Geyer SH, Reissig L, Rose J, Szumska D, Hardman E, Prin F, McGuire C, Ramirez-Solis R, White J, Galli A, Tudor C, Tuck E, Mazzeo CI, Smith JC, Robertson E, Adams DJ, Mohun T, Weninger WJ
Wellcome open research11(2016)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following 4933434E20Rik gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the 4933434E20Rik cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu00993 | |
Clone ID Related Accession (Same CDS sequence) | NM_025762.3 , NM_001287087.1 | |
Accession Version | NM_025762.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 762bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-09 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C1orf43 homolog isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC163616.3 and AK051238.1. On Nov 28, 2013 this sequence version replaced NM_025762.2. Transcript Variant: This variant (1) encodes the longest isoform (1). Variants 1 and 4 encode the same protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK051238.1, SRR1660811.104083.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGTCTA GTAGTAACTG GCTTTCTGGA GTGAATGTCG TGCTGGTGAT GGCGTACGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_080038.1 |
CDS | 253..1014 |
Translation |
Target ORF information:
Target ORF information:
|
NM_025762.3 |
1 | ATGGCGTCTA GTAGTAACTG GCTTTCTGGA GTGAATGTCG TGCTGGTGAT GGCGTACGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu00993 | |
Clone ID Related Accession (Same CDS sequence) | NM_025762.3 , NM_001287087.1 | |
Accession Version | NM_001287087.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 762bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-24 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C1orf43 homolog isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK077215.1 and AK051238.1. Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1 and 4 encode the same protein. ##Evidence-Data-START## Transcript exon combination :: AK077215.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGTCTA GTAGTAACTG GCTTTCTGGA GTGAATGTCG TGCTGGTGAT GGCGTACGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001274016.1 |
CDS | 398..1159 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001287087.1 |
1 | ATGGCGTCTA GTAGTAACTG GCTTTCTGGA GTGAATGTCG TGCTGGTGAT GGCGTACGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu04296 | |
Clone ID Related Accession (Same CDS sequence) | NM_027500.4 | |
Accession Version | NM_027500.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 570bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-09 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C1orf43 homolog isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC163616.3, AK017833.1 and BG091444.1. On Nov 28, 2013 this sequence version replaced NM_027500.3. Transcript Variant: This variant (2) contains a 3' terminal exon that extends past a splice site that is used in variant 1. This results in a frameshift compared to variant 1. The encoded protein (isoform 2) has a distinct C-terminus and is shorter than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK017833.1, BQ918001.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGTCTA GTAGTAACTG GCTTTCTGGA GTGAATGTCG TGCTGGTGAT GGCGTACGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_081776.2 |
CDS | 253..822 |
Translation |
Target ORF information:
Target ORF information:
|
NM_027500.4 |
1 | ATGGCGTCTA GTAGTAACTG GCTTTCTGGA GTGAATGTCG TGCTGGTGAT GGCGTACGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu09535 | |
Clone ID Related Accession (Same CDS sequence) | NM_001287086.1 | |
Accession Version | NM_001287086.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 381bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-09 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C1orf43 homolog isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC163616.3. Transcript Variant: This variant (3) contains a distinct 5' UTR, lacks an in-frame portion of the 5' coding region and initiates translation at a downstream start codon compared to variant 1. The resulting isoform (3) has a shorter N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC018438.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGTAAGA ATTTCCGCTC CTACTTGCTA GATCTGCGAA ATACTAGCAC TCCTTTCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001274015.1 |
CDS | 462..842 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001287086.1 |
1 | ATGGGTAAGA ATTTCCGCTC CTACTTGCTA GATCTGCGAA ATACTAGCAC TCCTTTCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A staging system for correct phenotype interpretation of mouse embryos harvested on embryonic day 14 (E14.5). |
Highly variable penetrance of abnormal phenotypes in embryonic lethal knockout mice. |