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LOC4336482 cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice)

Summary

Gene Symbol LOC4336482
Entrez Gene ID 4336482
Full Name syntaxin-81
Gene Type protein-coding
Organism Oryza sativa Japonica Group(Japanese rice)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_015780366.1 XP_015635852.1 syntaxin-81
XM_015780366.2 XP_015635852.1 syntaxin-81

Pathways from BioSystems


Homologies


STX18 XP_001094903.1
Arabidopsis thaliana (thale cress) SYP81 NP_564597.1
Canis lupus familiaris (dog) STX18 XP_851021.1
Bos taurus (cattle) STX18 NP_001093189.1
Mus musculus (house mouse) Stx18 NP_081235.2
Danio rerio (zebrafish) stx18 NP_001019596.1
Xenopus tropicalis (tropical clawed frog) stx18 NP_001016709.1
Rattus norvegicus (Norway rat) Stx18 NP_001012151.1
Drosophila melanogaster (fruit fly) Syx18 NP_524485.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP011160 XP_309489.4
Homo sapiens (human) STX18 NP_058626.1
Pan troglodytes (chimpanzee) STX18 XP_001154387.1
Gallus gallus (chicken) STX18 NP_001239087.1
Oryza sativa (rice) Os04g0530400 NP_001053389.1

Gene Ontology

The following LOC4336482 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC4336482 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OOa10141 XM_015780366.2
Latest version!		 Oryza sativa Japonica Group syntaxin-81 (LOC4336482), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00
View Old Accession Versions >>
OOa10141 XM_015780366.1 Oryza sativa Japonica Group syntaxin-81 (LOC4336482), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OOa10141
Clone ID Related Accession (Same CDS sequence) XM_015780366.1 , XM_015780366.2
Accession Version XM_015780366.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 951bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-02-29
Organism Oryza sativa Japonica Group(Japanese rice)
Product syntaxin-81
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379177.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGTCGAGGG TTCGCGACAG GACCGAGGAC TTCAAGGAGT CCGTCCGCGT CGCCGCGCTC 
GGCCATGGGT ACACGGAGTC TCAGTTAGCC GTGCTCATGT CTTCCTTCAT CATCCGGAAG 
CCGGCCCCCA AATTACCCTT TACAAAGGCT GCAATCAAGA CGCTTGAGAG TATCAGGGAA 
CTGGAGAAGT TTATTGTGAA GCATAGGAAG GACTATGTTG ACTTGCATCG CACCACGGAG 
CAAGAAAGGG ACAACATTGA GCATGAGGTC AGTGTTTTTG TAAAAGCATG CAAGGAACAA 
ATAGATATCC TAAAGAACAG GATCCATGAA GAAAAAGGTG GAAGTACAAA GACATGGCTT 
GGTACAAGCG ATGAGAGCTC CCGGTTGGAT TTGATAGCTC ACCAGCATGG CGTGGTTTTG 
ATTTTGAGTG AGCGTCTTCA CTCAGTAACT GTGCAATTTG ATCGTCTTCG GACCATGCGT 
TTTCAAGATG CTATTAACAG AGCGATGCCA AGAAAACGGA TTCAGAAGAA ACGAGAAACC 
AAAGCTGCTG AACCATCTAA GCCAAACCTT GTATTAAAAT CTGATGTTTC AAAGGTTGAA 
GATCAGGAGG TCTCTACTGC ACCACTAAGA GTTCAAGAAC AACTCTTGGA TGATGAAACA 
AGAGCTCTTC AGGTGGAGTT GACAAATCTT CTTGATGCTG TCCAAGAAAC AGAGACAAAG 
ATGATAGAGA TGTCAGCACT TAATCATCTC ATGTCAACAC ATGTTCTACA ACAAGCTCAG 
CAGATCCAGT ATTTATATGA CCAGGCAGTT GAAGCTACAA ACAATGTGGA GCGTGGGAAC 
AAGGAGCTAT CCCAGGCGAT CCAGCGCAAC AGCAGCAGTA GAACCTTCCT CCTACTTTTC 
TTCTTTGTTC TTACCTTTTC CGTTCTCTTT CTGGATTGGT ACAGCAAATG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_015635852.1
CDS317..1267
Translation

Target ORF information:

RefSeq Version XM_015780366.1
Organism Oryza sativa Japonica Group(Japanese rice)
Definition Oryza sativa Japonica Group syntaxin-81 (LOC4336482), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_015780366.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGTCGAGGG TTCGCGACAG GACCGAGGAC TTCAAGGAGT CCGTCCGCGT CGCCGCGCTC 
GGCCATGGGT ACACGGAGTC TCAGTTAGCC GTGCTCATGT CTTCCTTCAT CATCCGGAAG 
CCGGCCCCCA AATTACCCTT TACAAAGGCT GCAATCAAGA CGCTTGAGAG TATCAGGGAA 
CTGGAGAAGT TTATTGTGAA GCATAGGAAG GACTATGTTG ACTTGCATCG CACCACGGAG 
CAAGAAAGGG ACAACATTGA GCATGAGGTC AGTGTTTTTG TAAAAGCATG CAAGGAACAA 
ATAGATATCC TAAAGAACAG GATCCATGAA GAAAAAGGTG GAAGTACAAA GACATGGCTT 
GGTACAAGCG ATGAGAGCTC CCGGTTGGAT TTGATAGCTC ACCAGCATGG CGTGGTTTTG 
ATTTTGAGTG AGCGTCTTCA CTCAGTAACT GTGCAATTTG ATCGTCTTCG GACCATGCGT 
TTTCAAGATG CTATTAACAG AGCGATGCCA AGAAAACGGA TTCAGAAGAA ACGAGAAACC 
AAAGCTGCTG AACCATCTAA GCCAAACCTT GTATTAAAAT CTGATGTTTC AAAGGTTGAA 
GATCAGGAGG TCTCTACTGC ACCACTAAGA GTTCAAGAAC AACTCTTGGA TGATGAAACA 
AGAGCTCTTC AGGTGGAGTT GACAAATCTT CTTGATGCTG TCCAAGAAAC AGAGACAAAG 
ATGATAGAGA TGTCAGCACT TAATCATCTC ATGTCAACAC ATGTTCTACA ACAAGCTCAG 
CAGATCCAGT ATTTATATGA CCAGGCAGTT GAAGCTACAA ACAATGTGGA GCGTGGGAAC 
AAGGAGCTAT CCCAGGCGAT CCAGCGCAAC AGCAGCAGTA GAACCTTCCT CCTACTTTTC 
TTCTTTGTTC TTACCTTTTC CGTTCTCTTT CTGGATTGGT ACAGCAAATG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OOa10141
Clone ID Related Accession (Same CDS sequence) XM_015780366.1 , XM_015780366.2
Accession Version XM_015780366.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 951bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-08-06
Organism Oryza sativa Japonica Group(Japanese rice)
Product syntaxin-81
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029259.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015780366.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGTCGAGGG TTCGCGACAG GACCGAGGAC TTCAAGGAGT CCGTCCGCGT CGCCGCGCTC 
GGCCATGGGT ACACGGAGTC TCAGTTAGCC GTGCTCATGT CTTCCTTCAT CATCCGGAAG 
CCGGCCCCCA AATTACCCTT TACAAAGGCT GCAATCAAGA CGCTTGAGAG TATCAGGGAA 
CTGGAGAAGT TTATTGTGAA GCATAGGAAG GACTATGTTG ACTTGCATCG CACCACGGAG 
CAAGAAAGGG ACAACATTGA GCATGAGGTC AGTGTTTTTG TAAAAGCATG CAAGGAACAA 
ATAGATATCC TAAAGAACAG GATCCATGAA GAAAAAGGTG GAAGTACAAA GACATGGCTT 
GGTACAAGCG ATGAGAGCTC CCGGTTGGAT TTGATAGCTC ACCAGCATGG CGTGGTTTTG 
ATTTTGAGTG AGCGTCTTCA CTCAGTAACT GTGCAATTTG ATCGTCTTCG GACCATGCGT 
TTTCAAGATG CTATTAACAG AGCGATGCCA AGAAAACGGA TTCAGAAGAA ACGAGAAACC 
AAAGCTGCTG AACCATCTAA GCCAAACCTT GTATTAAAAT CTGATGTTTC AAAGGTTGAA 
GATCAGGAGG TCTCTACTGC ACCACTAAGA GTTCAAGAAC AACTCTTGGA TGATGAAACA 
AGAGCTCTTC AGGTGGAGTT GACAAATCTT CTTGATGCTG TCCAAGAAAC AGAGACAAAG 
ATGATAGAGA TGTCAGCACT TAATCATCTC ATGTCAACAC ATGTTCTACA ACAAGCTCAG 
CAGATCCAGT ATTTATATGA CCAGGCAGTT GAAGCTACAA ACAATGTGGA GCGTGGGAAC 
AAGGAGCTAT CCCAGGCGAT CCAGCGCAAC AGCAGCAGTA GAACCTTCCT CCTACTTTTC 
TTCTTTGTTC TTACCTTTTC CGTTCTCTTT CTGGATTGGT ACAGCAAATG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_015635852.1
CDS293..1243
Translation

Target ORF information:

RefSeq Version XM_015780366.2
Organism Oryza sativa Japonica Group(Japanese rice)
Definition Oryza sativa Japonica Group syntaxin-81 (LOC4336482), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_015780366.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGTCGAGGG TTCGCGACAG GACCGAGGAC TTCAAGGAGT CCGTCCGCGT CGCCGCGCTC 
GGCCATGGGT ACACGGAGTC TCAGTTAGCC GTGCTCATGT CTTCCTTCAT CATCCGGAAG 
CCGGCCCCCA AATTACCCTT TACAAAGGCT GCAATCAAGA CGCTTGAGAG TATCAGGGAA 
CTGGAGAAGT TTATTGTGAA GCATAGGAAG GACTATGTTG ACTTGCATCG CACCACGGAG 
CAAGAAAGGG ACAACATTGA GCATGAGGTC AGTGTTTTTG TAAAAGCATG CAAGGAACAA 
ATAGATATCC TAAAGAACAG GATCCATGAA GAAAAAGGTG GAAGTACAAA GACATGGCTT 
GGTACAAGCG ATGAGAGCTC CCGGTTGGAT TTGATAGCTC ACCAGCATGG CGTGGTTTTG 
ATTTTGAGTG AGCGTCTTCA CTCAGTAACT GTGCAATTTG ATCGTCTTCG GACCATGCGT 
TTTCAAGATG CTATTAACAG AGCGATGCCA AGAAAACGGA TTCAGAAGAA ACGAGAAACC 
AAAGCTGCTG AACCATCTAA GCCAAACCTT GTATTAAAAT CTGATGTTTC AAAGGTTGAA 
GATCAGGAGG TCTCTACTGC ACCACTAAGA GTTCAAGAAC AACTCTTGGA TGATGAAACA 
AGAGCTCTTC AGGTGGAGTT GACAAATCTT CTTGATGCTG TCCAAGAAAC AGAGACAAAG 
ATGATAGAGA TGTCAGCACT TAATCATCTC ATGTCAACAC ATGTTCTACA ACAAGCTCAG 
CAGATCCAGT ATTTATATGA CCAGGCAGTT GAAGCTACAA ACAATGTGGA GCGTGGGAAC 
AAGGAGCTAT CCCAGGCGAT CCAGCGCAAC AGCAGCAGTA GAACCTTCCT CCTACTTTTC 
TTCTTTGTTC TTACCTTTTC CGTTCTCTTT CTGGATTGGT ACAGCAAATG A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed