ORF » Species Summary » Populus trichocarpa » LOC7460021 cDNA ORF clone

LOC7460021 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7460021 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7460021 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa22562 XM_002315581.2
Latest version!		 Populus trichocarpa leucine-rich repeat family protein (POPTR_0010s06840g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
OPa438815 XM_024611420.1
Latest version!		 Populus trichocarpa receptor protein kinase-like protein ZAR1 (LOC7460021), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7460021 ( XM_002315581.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002315617.2 Populus trichocarpa leucine-rich repeat family protein (POPTR_0010s06840g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa22562
    Clone ID Related Accession (Same CDS sequence) XM_002315581.2
    Accession Version XM_002315581.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 654bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product leucine-rich repeat family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008476). On Dec 16, 2013 this sequence version replaced XM_002315581.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGACACCTT CTCTAGGGAA AAATGGTCAG CCTTCAACAA GTCTGTCATG GTCAACCAGG 
    CTGAGAATTG CCAAGGGGAC AGCCAGGGGC TTAGCCTACC TTCACGAATG CAGCCCGAGA 
    AAATTTGTCC ACGGAGACAT CAAGCCATCT AATATTCTCC TCGACAACGA ATTCCAACCT 
    TACATTTCTG ATTTTGGCCT CAACCGACTG ATCAGCATCA CTGGCAACAA TCCCTCCTCT 
    TCGGGCGGCT TTATGGGCGG AGCACTCCCT TACTTAAAAT CAGCTCAAAC AGAGCGAACA 
    AACAACTACC GTGCTCCAGA GGCTCGTGTT TCGGGCAACA GACCTACCCA AAAATGGGAT 
    GTGTATTCAT TTGGAATTGT TTTGCTCGAG TTGCTTACTG GAAAATCTCC TGAGCTTTCA 
    CCAACCACGT CCACTTCGAT AGAAATTCCA GACCTGGTGA GATGGGTGAG AAAGGGATTT 
    GCAGATGAAA ACCCTTTATC AGACATGGTT GATTCAATGT TGCTCCAAGA AGTACATGCA 
    AAAAAGGAGG TGCTAGCGGT TTTTCATGTT GCTCTTGCTT GCACCGAAGC CGACTCTGAG 
    GTTCGCCCTA GGATGAAAAT TGTATCTGAA AATCTTGAAA GGATCGGAAC ATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002315617.2
    CDS114..767
    Translation

    Target ORF information:

    RefSeq Version XM_002315581.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa leucine-rich repeat family protein (POPTR_0010s06840g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002315581.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGACACCTT CTCTAGGGAA AAATGGTCAG CCTTCAACAA GTCTGTCATG GTCAACCAGG 
    CTGAGAATTG CCAAGGGGAC AGCCAGGGGC TTAGCCTACC TTCACGAATG CAGCCCGAGA 
    AAATTTGTCC ACGGAGACAT CAAGCCATCT AATATTCTCC TCGACAACGA ATTCCAACCT 
    TACATTTCTG ATTTTGGCCT CAACCGACTG ATCAGCATCA CTGGCAACAA TCCCTCCTCT 
    TCGGGCGGCT TTATGGGCGG AGCACTCCCT TACTTAAAAT CAGCTCAAAC AGAGCGAACA 
    AACAACTACC GTGCTCCAGA GGCTCGTGTT TCGGGCAACA GACCTACCCA AAAATGGGAT 
    GTGTATTCAT TTGGAATTGT TTTGCTCGAG TTGCTTACTG GAAAATCTCC TGAGCTTTCA 
    CCAACCACGT CCACTTCGAT AGAAATTCCA GACCTGGTGA GATGGGTGAG AAAGGGATTT 
    GCAGATGAAA ACCCTTTATC AGACATGGTT GATTCAATGT TGCTCCAAGA AGTACATGCA 
    AAAAAGGAGG TGCTAGCGGT TTTTCATGTT GCTCTTGCTT GCACCGAAGC CGACTCTGAG 
    GTTCGCCCTA GGATGAAAAT TGTATCTGAA AATCTTGAAA GGATCGGAAC ATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7460021 ( XM_024611420.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024467188.1 Populus trichocarpa receptor protein kinase-like protein ZAR1 (LOC7460021), mRNA.
    Price & Availability↑
    CloneID OPa438815
    Clone ID Related Accession (Same CDS sequence) XM_024611420.1
    Accession Version XM_024611420.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2403bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product receptor protein kinase-like protein ZAR1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037294.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    ATGAGACCAA ACTCTCTAAT CAGAAAGCAC TTGCGTCATT GCTTTTCTTC TACTCCCCTC 
    GGAAGTCCTT TCTCAGGTGG ACCCCATTTT AATCAAAATC TCGTCTTTCT CAAGTCTCTT 
    CCTCTCATAA ATCTCTCACT CCCAACCACC TCCACACCCT CCAGCATCAC TTGCCTTTCT 
    TTTCCTTCTT ATAGTTTCCA CTGTAAGTAT ATGCCACTCT CTCATTTTAC TCCTCTCCGA 
    AACAAAAACA CCGTGATGAA GAGAAACCTC TCGTTAACGC TGCTCTTTCT CTTCTTTCAC 
    TTCCTATTCA GCACCAAACC CAGCCACTCC CTCACAGCTG ATGGCTTATC CCTCCTGTCC 
    TTAAAATCAG CCGTTGATCA AAGTTCTGCT GGCTCTGCTT TCTCTGACTG GAACGAAGAT 
    GACCAAAATC CATGTCACTG GACTGGCATT TCCTGCATGA ACATAACCGG GTTACCGGAC 
    CCTCGTGTTG TTGGCATTGC AATCTCCGGC AAGAATCTCC GCGGTTACAT TCCATCCGAG 
    CTTGGCACCT TAATTTATCT TCGGAGACTT AATCTCCACA ACAACAACTT CTACGGTTCA 
    ATACCTGACC AGCTGCTTAA CGCTACTTCA CTTCACAGTC TTTTTCTCTA CGGTAACAAT 
    CTTTCTGGTT CTCTCCCTCC TTTCATCTGT AACCTCCCTC GTCTTCAAAA TCTTGACCTT 
    TCCAACAACT CGCTGTCGGG TTCTTTGCCT CAAAATTTAA ATAGCTGCAA GCAGTTGCAG 
    AGGTTGATCC TAGCGAAAAA TAAATTCTCC GGTCCAATTC CAGCTGGGAT TTGGCCTGAA 
    TTGGATAATT TAATGCAGCT TGATCTTTCT GCTAATGATT TCAATGGATC CATTCCTAAC 
    GATATGGGAG AGCTTAAGTC TTTGTCCAAT ACTTTAAATC TTTCTTTCAA TCATTTATCG 
    GGTAGGATTC CGAAATCACT GGGAAATTTG CCTGTTACTG TGAGTTTTGA TCTGCGAAAC 
    AACAATTTCA GCGGCGAGAT ACCTCAAACA GGGTCTTTTG CTAACCAAGG ACCGACTGCT 
    TTCCTCAGCA ATCCTTTGCT TTGCGGGTTT CCTCTTCAGA AATCTTGCAA GGACCCCGCA 
    CATAGCTCGT CTGAAACTCA GAATTCAGCA CCGGTTTCTG ATAACAGTCC TAGAAAAGGA 
    TTAAGTCCCG GTTTGATAAT ATTAATCTCA GTAGCTGACG CAGCTGGTGT GGCGTTTCTT 
    GGTCTAGTTA TAGTTTATAT TTACTGGAAA AAGAAGGATG ATTCTAATGG TTGTAGCTGC 
    GCTGGGAAAA GCAAATTTGG TGGCAATGAG AAATCACACT CGTGTTCACT ATGTTATTGT 
    GGTAATGGGC TTCGAAACGA TGACTCTGAA TTGGAAGATC TGGAAAAAGT AGAAAGAGGG 
    AAGCCGGAAG GAGAGCTGGT GGCGATCGAT AAAGGTTTTA CTTTTGAGCT TGATGAATTG 
    CTAAGAGCAT CTGCTTATGT GTTGGGGAAG AGTGGGTTGG GGATAGTGTA TAAAGTGGTG 
    CTCGGAAATG GCATTCCGGT GGCGGTGAGG AGGCTTGGCG AGGGAGGAGA GCAGAGGTAC 
    AAAGAGTTTG TAACGGAGGC GCAGGCTATT GGGAAGGTTA AGCATCCAAA TGTTGTCAAG 
    TTGAGAGCTT ATTACTGGGC TCCAGATGAA AAGCTTCTCA TCAGTGATTT CATCTCCAAT 
    GGCAACTTGG CTAATGCTCT TCGAGGGAAA AATGGTCAGC CTTCAACAAG TCTGTCATGG 
    TCAACCAGGC TGAGAATTGC CAAGGGGACA GCCAGGGGCT TAGCCTACCT TCACGAATGC 
    AGCCCGAGAA AATTTGTCCA CGGAGACATC AAGCCATCTA ATATTCTCCT CGACAACGAA 
    TTCCAACCTT ACATTTCTGA TTTTGGCCTC AACCGACTGA TCAGCATCAC TGGCAACAAT 
    CCCTCCTCTT CGGGCGGCTT TATGGGCGGA GCACTCCCTT ACTTAAAATC AGCTCAAACA 
    GAGCGAACAA ACAACTACCG TGCTCCAGAG GCTCGTGTTT CGGGCAACAG ACCTACCCAA 
    AAATGGGATG TGTATTCATT TGGAATTGTT TTGCTCGAGT TGCTTACTGG AAAATCTCCT 
    GAGCTTTCAC CAACCACGTC CACTTCGATA GAAATTCCAG ACCTGGTGAG ATGGGTGAGA 
    AAGGGATTTG CAGATGAAAA CCCTTTATCA GACATGGTTG ATTCAATGTT GCTCCAAGAA 
    GTACATGCAA AAAAGGAGGT GCTAGCGGTT TTTCATGTTG CTCTTGCTTG CACCGAAGCC 
    GACTCTGAGG TTCGCCCTAG GATGAAAATT GTATCTGAAA ATCTTGAAAG GATCGGAACA 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024467188.1
    CDS209..2611
    Translation

    Target ORF information:

    RefSeq Version XM_024611420.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa receptor protein kinase-like protein ZAR1 (LOC7460021), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024611420.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    ATGAGACCAA ACTCTCTAAT CAGAAAGCAC TTGCGTCATT GCTTTTCTTC TACTCCCCTC 
    GGAAGTCCTT TCTCAGGTGG ACCCCATTTT AATCAAAATC TCGTCTTTCT CAAGTCTCTT 
    CCTCTCATAA ATCTCTCACT CCCAACCACC TCCACACCCT CCAGCATCAC TTGCCTTTCT 
    TTTCCTTCTT ATAGTTTCCA CTGTAAGTAT ATGCCACTCT CTCATTTTAC TCCTCTCCGA 
    AACAAAAACA CCGTGATGAA GAGAAACCTC TCGTTAACGC TGCTCTTTCT CTTCTTTCAC 
    TTCCTATTCA GCACCAAACC CAGCCACTCC CTCACAGCTG ATGGCTTATC CCTCCTGTCC 
    TTAAAATCAG CCGTTGATCA AAGTTCTGCT GGCTCTGCTT TCTCTGACTG GAACGAAGAT 
    GACCAAAATC CATGTCACTG GACTGGCATT TCCTGCATGA ACATAACCGG GTTACCGGAC 
    CCTCGTGTTG TTGGCATTGC AATCTCCGGC AAGAATCTCC GCGGTTACAT TCCATCCGAG 
    CTTGGCACCT TAATTTATCT TCGGAGACTT AATCTCCACA ACAACAACTT CTACGGTTCA 
    ATACCTGACC AGCTGCTTAA CGCTACTTCA CTTCACAGTC TTTTTCTCTA CGGTAACAAT 
    CTTTCTGGTT CTCTCCCTCC TTTCATCTGT AACCTCCCTC GTCTTCAAAA TCTTGACCTT 
    TCCAACAACT CGCTGTCGGG TTCTTTGCCT CAAAATTTAA ATAGCTGCAA GCAGTTGCAG 
    AGGTTGATCC TAGCGAAAAA TAAATTCTCC GGTCCAATTC CAGCTGGGAT TTGGCCTGAA 
    TTGGATAATT TAATGCAGCT TGATCTTTCT GCTAATGATT TCAATGGATC CATTCCTAAC 
    GATATGGGAG AGCTTAAGTC TTTGTCCAAT ACTTTAAATC TTTCTTTCAA TCATTTATCG 
    GGTAGGATTC CGAAATCACT GGGAAATTTG CCTGTTACTG TGAGTTTTGA TCTGCGAAAC 
    AACAATTTCA GCGGCGAGAT ACCTCAAACA GGGTCTTTTG CTAACCAAGG ACCGACTGCT 
    TTCCTCAGCA ATCCTTTGCT TTGCGGGTTT CCTCTTCAGA AATCTTGCAA GGACCCCGCA 
    CATAGCTCGT CTGAAACTCA GAATTCAGCA CCGGTTTCTG ATAACAGTCC TAGAAAAGGA 
    TTAAGTCCCG GTTTGATAAT ATTAATCTCA GTAGCTGACG CAGCTGGTGT GGCGTTTCTT 
    GGTCTAGTTA TAGTTTATAT TTACTGGAAA AAGAAGGATG ATTCTAATGG TTGTAGCTGC 
    GCTGGGAAAA GCAAATTTGG TGGCAATGAG AAATCACACT CGTGTTCACT ATGTTATTGT 
    GGTAATGGGC TTCGAAACGA TGACTCTGAA TTGGAAGATC TGGAAAAAGT AGAAAGAGGG 
    AAGCCGGAAG GAGAGCTGGT GGCGATCGAT AAAGGTTTTA CTTTTGAGCT TGATGAATTG 
    CTAAGAGCAT CTGCTTATGT GTTGGGGAAG AGTGGGTTGG GGATAGTGTA TAAAGTGGTG 
    CTCGGAAATG GCATTCCGGT GGCGGTGAGG AGGCTTGGCG AGGGAGGAGA GCAGAGGTAC 
    AAAGAGTTTG TAACGGAGGC GCAGGCTATT GGGAAGGTTA AGCATCCAAA TGTTGTCAAG 
    TTGAGAGCTT ATTACTGGGC TCCAGATGAA AAGCTTCTCA TCAGTGATTT CATCTCCAAT 
    GGCAACTTGG CTAATGCTCT TCGAGGGAAA AATGGTCAGC CTTCAACAAG TCTGTCATGG 
    TCAACCAGGC TGAGAATTGC CAAGGGGACA GCCAGGGGCT TAGCCTACCT TCACGAATGC 
    AGCCCGAGAA AATTTGTCCA CGGAGACATC AAGCCATCTA ATATTCTCCT CGACAACGAA 
    TTCCAACCTT ACATTTCTGA TTTTGGCCTC AACCGACTGA TCAGCATCAC TGGCAACAAT 
    CCCTCCTCTT CGGGCGGCTT TATGGGCGGA GCACTCCCTT ACTTAAAATC AGCTCAAACA 
    GAGCGAACAA ACAACTACCG TGCTCCAGAG GCTCGTGTTT CGGGCAACAG ACCTACCCAA 
    AAATGGGATG TGTATTCATT TGGAATTGTT TTGCTCGAGT TGCTTACTGG AAAATCTCCT 
    GAGCTTTCAC CAACCACGTC CACTTCGATA GAAATTCCAG ACCTGGTGAG ATGGGTGAGA 
    AAGGGATTTG CAGATGAAAA CCCTTTATCA GACATGGTTG ATTCAATGTT GCTCCAAGAA 
    GTACATGCAA AAAAGGAGGT GCTAGCGGTT TTTCATGTTG CTCTTGCTTG CACCGAAGCC 
    GACTCTGAGG TTCGCCCTAG GATGAAAATT GTATCTGAAA ATCTTGAAAG GATCGGAACA 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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