ORF » Species Summary » Populus trichocarpa » LOC7485402 cDNA ORF clone

LOC7485402 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7485402 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7485402 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa439961 XM_024581617.1
Latest version!		 Populus trichocarpa uncharacterized LOC7485402 (LOC7485402), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00
OPa25394 XM_002317145.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0011s01050g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector TBD $174.30
$249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7485402 ( XM_024581617.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024437385.1 Populus trichocarpa uncharacterized LOC7485402 (LOC7485402), mRNA.
    Price & Availability↑
    CloneID OPa439961
    Clone ID Related Accession (Same CDS sequence) XM_024581617.1
    Accession Version XM_024581617.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2319bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product uncharacterized protein LOC7485402
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037295.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    ATGGGTTCTC TTCCTATAAT GGGGATACCT TATAGAGCAG CCATGAGTGG AAATTGGAAA 
    AGCATGCTTG ACCATTATCA GGAACGTGTC CTAGATGTGC CCTTCCCAGT TACGCTCTCT 
    GCGGATACTG CACTTCATTT AGCTGTGTAC AGCAAACAAA AGCAACCACT TAAAGATTTA 
    CTTGAAATCG TGAAGTATAT ACCTGATGAG ACAGAATTCC TTGTACCTGA TGAGACAGAA 
    TTCGTTGTAC CTGACGAGAC AGAACCCCTT GTAACTGAGA CAGAGTCTGA GACAGAGTCC 
    CTTGTACCTG AGATAGAGAC TGAATTTCTC AAGAGAAAAA ACAAATTTGG AAATACGGCT 
    CTTCACGAGG CAACCATCTA CGGGAATTAT GAGGCTGCAA GGCTCTTGGT AGAACGTTGT 
    CCAGACCTCC TTAAGGAAAA AAATAACTAC GGTGAAACCC CATTGTTTAC AGCTGCTGGA 
    TTTGCTGAGA CAAAAATAGT GGAGTTTTTA ATCACATCCA AACCAGAAAA ATGCGTGGAT 
    AATAAGTGCC GCCTATCGTT AATTCACCGC CAGAGAACGG ATGGCCTGTC CATCATTAGC 
    TCTGCTATCA GAGGGCAACA CATTGAAACA GCTTTACTGT TGCTAGAACT GGATGACTCG 
    CTCCACAAGT TGAAGGACAA AGACGGCGTA ACTGCTCTTC AACTTCTAGC CCAAATGCCA 
    ACCGCTTTTG AGAGTGGATT TCCCATGGGC ATATGTGAAA GACTCATCTA CTGCTGCCTT 
    CCTGTTAAAC GTCACCACAA GGTAAAATTA CAGGTGGAAA CTTGGTTCAA GGAAAGAAAG 
    AGGCCGAGAG ATCCTGAGAG CGGTCAAGGG AGGAATTCTG AAGATCTGGG GAGCGGCTCG 
    GAGAGGAATC AAAGAGGTGG CATACTCAAA TATTTAGAGG TCCCTAAAGT GCGATGTTGG 
    CCAGCAAGGC TAGAAGAATT CTGGAACCAG AAAAGAAAGC ATGTATTTGC TTTGAGACTC 
    GCCAAAAAAC TAATAGAGAA AGATGAGTCA TTGAATAGAG TCAGCATAAC AGAGGAAGAG 
    GAAGGACAAG AAGATCAAAA TAAAGAAGAA GAAGAGAAAG GATTGGGTGA GAAAAAAAAA 
    GGGAGGGAGA AATCGAGTTC TCTTAATTCA CTAGCTAAGG AAAAGACAGA AGAAATCCAA 
    CGTCAATATC CAACAGAAAC TTCTGAGACG AACTCATCAT TTAAGGAGAA GATCCCATTG 
    TTTATTATTG CAACCAAAAA TGGAAAAGAA GAAATTGTGT TGGAGATAAT GAAAAAATAT 
    CCCGATGCTA CGACCTCATT AACTAGAAAG GAGCATATCC CGTTGTTTAT TGCAACTATA 
    AATGGAATAG AAGAGATTGT GAGGGGGATA ATAAATCAAT ATCCCCACGC TGTTGAGCAT 
    CTCAACGAGG AGGGTCAGAG CATTTTGGAT GTGGCCGTCA TGCATCGCCA GAAAAATATC 
    TTCAGTCTTG TGAAGCATCA GAAAGTACCA TTGGCTAGAC TGCATCGAGT TCTTGATAAG 
    AAGGGCAACA CATTGTTGCA CCATGTTGCA GATATGGAGC ATTACAGAGG AGGAACCAAG 
    CCTGGGCCTG CACTTAAACT TCAGGAGGAG TTGCAATGGT TTGAGCAAGT GCAAAAGGTA 
    ATTCCTTCTC ATTATGTCAC GCTTCGGAAC GATGAAGGCA AGACTGCAGA AGAGCTCTTC 
    AAAGAGAGTC ACCAGGACCA ACTGAAAAAT GCACAAAAAT GGATCAAGGA AACGACTCAG 
    TCTTGTTCCA CAGTAGCTGC ACTTGTTGCT ACTGTTGTCT TTGCTGCTGC CTATACTGTG 
    CCCGGAGGTT CTGATAAGAA TGGCACGCCC AACTTCATCA ACTCTCCCTA TTTTCTGGTT 
    TTCACTGTCT CGGATGTTCT TTCCTTAGCA AGCTCCTTGA CTTCGCTTGT GGTATTTCTG 
    TCTTTGTTGA CCTCTCCATT TGAACTACAA GAATTTCACA TCTCTCTTCC TCGAAAACTT 
    CTTGTTGGCT TCACCTTCCT CTTCTTTGCT GTGATAACGA CCATGCTATC TTTTGGGGCC 
    ACAATCTTGA TACTCATTCA GTCAGAGAAA AAGTTGACAA CATTACTCCT TTCCATTGCT 
    GCATTCCTTC CAGTCTTAGT ATTTGCAATA ATGCAATTCC GTCTGTACGT CTCATTTATG 
    GGCTCTACAT ACAACATTCT CAAGATAACC GGGAAAGCTC TGCCACCGTT TCTTGTCCCT 
    TGCTTACCAC GGGATAAAAA GCTCTGTCGA GTTGATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024437385.1
    CDS150..2468
    Translation

    Target ORF information:

    RefSeq Version XM_024581617.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa uncharacterized LOC7485402 (LOC7485402), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024581617.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    ATGGGTTCTC TTCCTATAAT GGGGATACCT TATAGAGCAG CCATGAGTGG AAATTGGAAA 
    AGCATGCTTG ACCATTATCA GGAACGTGTC CTAGATGTGC CCTTCCCAGT TACGCTCTCT 
    GCGGATACTG CACTTCATTT AGCTGTGTAC AGCAAACAAA AGCAACCACT TAAAGATTTA 
    CTTGAAATCG TGAAGTATAT ACCTGATGAG ACAGAATTCC TTGTACCTGA TGAGACAGAA 
    TTCGTTGTAC CTGACGAGAC AGAACCCCTT GTAACTGAGA CAGAGTCTGA GACAGAGTCC 
    CTTGTACCTG AGATAGAGAC TGAATTTCTC AAGAGAAAAA ACAAATTTGG AAATACGGCT 
    CTTCACGAGG CAACCATCTA CGGGAATTAT GAGGCTGCAA GGCTCTTGGT AGAACGTTGT 
    CCAGACCTCC TTAAGGAAAA AAATAACTAC GGTGAAACCC CATTGTTTAC AGCTGCTGGA 
    TTTGCTGAGA CAAAAATAGT GGAGTTTTTA ATCACATCCA AACCAGAAAA ATGCGTGGAT 
    AATAAGTGCC GCCTATCGTT AATTCACCGC CAGAGAACGG ATGGCCTGTC CATCATTAGC 
    TCTGCTATCA GAGGGCAACA CATTGAAACA GCTTTACTGT TGCTAGAACT GGATGACTCG 
    CTCCACAAGT TGAAGGACAA AGACGGCGTA ACTGCTCTTC AACTTCTAGC CCAAATGCCA 
    ACCGCTTTTG AGAGTGGATT TCCCATGGGC ATATGTGAAA GACTCATCTA CTGCTGCCTT 
    CCTGTTAAAC GTCACCACAA GGTAAAATTA CAGGTGGAAA CTTGGTTCAA GGAAAGAAAG 
    AGGCCGAGAG ATCCTGAGAG CGGTCAAGGG AGGAATTCTG AAGATCTGGG GAGCGGCTCG 
    GAGAGGAATC AAAGAGGTGG CATACTCAAA TATTTAGAGG TCCCTAAAGT GCGATGTTGG 
    CCAGCAAGGC TAGAAGAATT CTGGAACCAG AAAAGAAAGC ATGTATTTGC TTTGAGACTC 
    GCCAAAAAAC TAATAGAGAA AGATGAGTCA TTGAATAGAG TCAGCATAAC AGAGGAAGAG 
    GAAGGACAAG AAGATCAAAA TAAAGAAGAA GAAGAGAAAG GATTGGGTGA GAAAAAAAAA 
    GGGAGGGAGA AATCGAGTTC TCTTAATTCA CTAGCTAAGG AAAAGACAGA AGAAATCCAA 
    CGTCAATATC CAACAGAAAC TTCTGAGACG AACTCATCAT TTAAGGAGAA GATCCCATTG 
    TTTATTATTG CAACCAAAAA TGGAAAAGAA GAAATTGTGT TGGAGATAAT GAAAAAATAT 
    CCCGATGCTA CGACCTCATT AACTAGAAAG GAGCATATCC CGTTGTTTAT TGCAACTATA 
    AATGGAATAG AAGAGATTGT GAGGGGGATA ATAAATCAAT ATCCCCACGC TGTTGAGCAT 
    CTCAACGAGG AGGGTCAGAG CATTTTGGAT GTGGCCGTCA TGCATCGCCA GAAAAATATC 
    TTCAGTCTTG TGAAGCATCA GAAAGTACCA TTGGCTAGAC TGCATCGAGT TCTTGATAAG 
    AAGGGCAACA CATTGTTGCA CCATGTTGCA GATATGGAGC ATTACAGAGG AGGAACCAAG 
    CCTGGGCCTG CACTTAAACT TCAGGAGGAG TTGCAATGGT TTGAGCAAGT GCAAAAGGTA 
    ATTCCTTCTC ATTATGTCAC GCTTCGGAAC GATGAAGGCA AGACTGCAGA AGAGCTCTTC 
    AAAGAGAGTC ACCAGGACCA ACTGAAAAAT GCACAAAAAT GGATCAAGGA AACGACTCAG 
    TCTTGTTCCA CAGTAGCTGC ACTTGTTGCT ACTGTTGTCT TTGCTGCTGC CTATACTGTG 
    CCCGGAGGTT CTGATAAGAA TGGCACGCCC AACTTCATCA ACTCTCCCTA TTTTCTGGTT 
    TTCACTGTCT CGGATGTTCT TTCCTTAGCA AGCTCCTTGA CTTCGCTTGT GGTATTTCTG 
    TCTTTGTTGA CCTCTCCATT TGAACTACAA GAATTTCACA TCTCTCTTCC TCGAAAACTT 
    CTTGTTGGCT TCACCTTCCT CTTCTTTGCT GTGATAACGA CCATGCTATC TTTTGGGGCC 
    ACAATCTTGA TACTCATTCA GTCAGAGAAA AAGTTGACAA CATTACTCCT TTCCATTGCT 
    GCATTCCTTC CAGTCTTAGT ATTTGCAATA ATGCAATTCC GTCTGTACGT CTCATTTATG 
    GGCTCTACAT ACAACATTCT CAAGATAACC GGGAAAGCTC TGCCACCGTT TCTTGTCCCT 
    TGCTTACCAC GGGATAAAAA GCTCTGTCGA GTTGATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7485402 ( XM_002317145.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002317181.1 Populus trichocarpa hypothetical protein (POPTR_0011s01050g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa25394
    Clone ID Related Accession (Same CDS sequence) XM_002317145.1
    Accession Version XM_002317145.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 957bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008477). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGGTTCTC TTCCTATAAT GGGGATACCT TATAGAGCAG CCATGAGTGG AAATTGGAAA 
    AGCATGCTTG ACCATTATCA GGAACGTGTC CTAGATGTGC CCTTCCCAGT TACGCTCTCT 
    GCGGATACTG CACTTCATTT AGCTGTGTAC AGCAAACAAA AGCAACCACT TAAAGATTTA 
    CTTGAAATCG TGAAGTATAT ACCTGATGAG ACAGAATTCC TTGTACCTGA TGAGACAGAA 
    TTCCTTGTAC CTGACGAGAC AGAACCCCTT GTAACTGAGA CAGAGTCTGA GACAGAGTCC 
    CTTGTACCTG AGATAGAGAC TGAATTTCTC AAGAGAAAAA ACAAATTTGG AAATACGGCT 
    CTTCACGAGG CAACCATCTA CGGGAATTAT GAGGCTGCAA GGCTCTTGGT AGAACGTTGT 
    CCAGACCTCC TTAAGGAAAA AAATAACTAC GGTGAAACCC CATTGTTTAC AGCTGCTGGA 
    TTTGCTGAGA CAAAAATAGT GGAGTTTTTA ATCACATCCA AACCAGAAAA ATGCGTGGAT 
    AATAAGTGCC GCCTATCGTT AATTCACCGC CAGAGAACGG ATGGCCTGTC CATCATTAGC 
    TCTGCTATCA GAGGGCAACA CATTGAAACA GCTTTACTGT TGCTAGAACT GGATGACTCG 
    CTCCACAAGT TGAAGGACAA AGACGGCGTA ACTGCTCTTC AACTTCTAGC CCAAATGCCA 
    ACCGCTTTTG AGAGTGGATT TCCCATGGGC ATATGTGAAA GACTCATCTA CTGCTGCCTT 
    CCTGTTAAAC GTCACCACAA GGTAAAATTA CAGGTGGAAA CTTGGTTCAA GGAAAGAAAG 
    AGGCCGAGAG ATCCTGAGAG CGGTCAAGGG AGGAATTCTG AAGATCTGGG GAGCGGCTCG 
    GAGAGGAATC AAAGAGGTGG CATACTCAAA TATTTAGAGG TCCCTAAAGG TATTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002317181.1
    CDS1..957
    Translation

    Target ORF information:

    RefSeq Version XM_002317145.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0011s01050g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002317145.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGGTTCTC TTCCTATAAT GGGGATACCT TATAGAGCAG CCATGAGTGG AAATTGGAAA 
    AGCATGCTTG ACCATTATCA GGAACGTGTC CTAGATGTGC CCTTCCCAGT TACGCTCTCT 
    GCGGATACTG CACTTCATTT AGCTGTGTAC AGCAAACAAA AGCAACCACT TAAAGATTTA 
    CTTGAAATCG TGAAGTATAT ACCTGATGAG ACAGAATTCC TTGTACCTGA TGAGACAGAA 
    TTCCTTGTAC CTGACGAGAC AGAACCCCTT GTAACTGAGA CAGAGTCTGA GACAGAGTCC 
    CTTGTACCTG AGATAGAGAC TGAATTTCTC AAGAGAAAAA ACAAATTTGG AAATACGGCT 
    CTTCACGAGG CAACCATCTA CGGGAATTAT GAGGCTGCAA GGCTCTTGGT AGAACGTTGT 
    CCAGACCTCC TTAAGGAAAA AAATAACTAC GGTGAAACCC CATTGTTTAC AGCTGCTGGA 
    TTTGCTGAGA CAAAAATAGT GGAGTTTTTA ATCACATCCA AACCAGAAAA ATGCGTGGAT 
    AATAAGTGCC GCCTATCGTT AATTCACCGC CAGAGAACGG ATGGCCTGTC CATCATTAGC 
    TCTGCTATCA GAGGGCAACA CATTGAAACA GCTTTACTGT TGCTAGAACT GGATGACTCG 
    CTCCACAAGT TGAAGGACAA AGACGGCGTA ACTGCTCTTC AACTTCTAGC CCAAATGCCA 
    ACCGCTTTTG AGAGTGGATT TCCCATGGGC ATATGTGAAA GACTCATCTA CTGCTGCCTT 
    CCTGTTAAAC GTCACCACAA GGTAAAATTA CAGGTGGAAA CTTGGTTCAA GGAAAGAAAG 
    AGGCCGAGAG ATCCTGAGAG CGGTCAAGGG AGGAATTCTG AAGATCTGGG GAGCGGCTCG 
    GAGAGGAATC AAAGAGGTGG CATACTCAAA TATTTAGAGG TCCCTAAAGG TATTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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