ORF » Species Summary » Populus trichocarpa » LOC7487133 cDNA ORF clone

LOC7487133 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7487133 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7487133 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa27126 XM_002317936.3
Latest version!		 Populus trichocarpa protein IMPAIRED IN BABA-INDUCED STERILITY 1 (LOC7487133), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 12-14 $426.30
$609.00
OPa440214 XM_024581902.1
Latest version!		 Populus trichocarpa protein IMPAIRED IN BABA-INDUCED STERILITY 1 (LOC7487133), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00
View Old Accession Versions >>
OPa27126 XM_002317936.2 Populus trichocarpa hypothetical protein (POPTR_0012s06960g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 12-14 $426.30
$609.00
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7487133 ( XM_002317936.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002317972.1 Populus trichocarpa hypothetical protein (POPTR_0012s06960g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa27126
    Clone ID Related Accession (Same CDS sequence) XM_002317936.2 , XM_002317936.3
    Accession Version XM_002317936.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2058bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008478). On Dec 16, 2013 this sequence version replaced XM_002317936.1. COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    ATGGGCTGCG TGAGCGCGAA GCAGGCGGTG TCCGTCACAC CAGCGTTGGA CCATTCCGGA 
    GCGTTCAACA CGGGTCGGAT TCGGGTCGGC GTGGACCAGC ACCCAAGTTT CAAGAAGAAT 
    GGGGATCGCC GTCACCATCA TGAGATGGTG GTGAGTTGCG GAGGGAGCGA GTTGGGTGAG 
    TCAGGAAGAG CTCCAAGTTC AAATGGCGAG TCGTTGAGCT TTAGATTGAG GAATTTGCAC 
    AAGTACATTG AAGGTGAGCA GGTGGCAGCA GGTTGGCCGG CCTGGCTAAG TGCCGTCGCT 
    GGCGAAGCCA TTCACGGTTG GGTCCCTCTG AATGCTGATG GTTTTGAGAA ATTGGACAAG 
    ATAGGACAGG GTACATATAG CAGTGTGTTC CGGGCACGTG AGACTGAAAC TGGGAGGATC 
    GTTGCTCTGA AGAAGGTTCG GTTCGACAAT TTTGAGCCTG AGAGTGTCCG ATTTATGGCC 
    AGAGAGATAT TGATTCTTCG TAGACTCGAC CACCCCAATA TCATGAAATT GGACGGATTA 
    ATCACTTCGC GATTGTCATG TAGCTTATAC CTTGTCTTTG AGTACATGGA GCATGATATC 
    ACTGGACTCC TGTCATGCCC TGATGTCAGG TTCAGTGAGT CACAGATTAA GTGCTACATG 
    AGGCAATTAT TATCAGGACT TGATCACTGT CACTCAAAGG GTGTAATGCA TCGGGACATC 
    AAAGGGTCAA ATCTTCTCGT AAACAATGAA GGAATACTCA AGGTAGGAGA TTTTGGATTG 
    GCAAACTTCT GTACTTCCGG GCACAGACAA CCTTTAACCA GTCGTGTAGT GACTCTGTGG 
    TACCGTCCTC CTGAACTTTT GTTGGGTTCT ACCGATTATG GAGCATCTGT GGATCTCTGG 
    AGTGTAGGCT GTGTATTTGC AGAACTTCTT CTTGGAAAAC CTATCCTTCA AGGGAGAACA 
    GAGGTTGAAC AGTTACACAA AATTTTCAAG CTCTGTGGAT CCCCGCCTGA TGAATACTGG 
    AAAAAGTCTA AACTTCCTCA TGCAACTTTA TTCAAACCAC AACAACCTTA TGACAGTTGT 
    CTTCGTGAGA CCTTTAAAGA TTTGCCAACA ACTGCTGTGA ACCTGATTGA AACTCTTCTC 
    TCTGTAGAGC CTTACAACCG TGGGACTGCT TTTTCTGCTC TTGCATCTGA GTATTTCAGC 
    ACAAAACCTT ATGCGTGTGA TCCATCAAGC TTGCCAAAAT ACCCACCTAG CAAAGAGATT 
    GATGCAAAAA AACACGAGGA GGCAGGGAGG AAAAAGATCA GTGGGAGAGG TCGTGGCACT 
    GAAACAAGAA AGTGTACAAG AAAACCATAC GGAATCAGTA AATTGGCACC AGCAGAGGAT 
    CTAGCAGCTA GAATACAATG CGGTCAAATC AATACCAGTA ATATGCGCAT TCCAAAGGTA 
    AGAGATGGCA AGTCCGGTGG AGAGGCACGG AAGCCATCAC TTGATAAATT GGAAGAGATT 
    TTCCACATAA AGAATGCATC CCAAGGAGAC ATTCCCTTTT CTGGCCCATT ACAAGTTTCT 
    AGTTCAAGTG GTTTTGCTTG GGCAAAAAGA CGAAATGGCG ATGCATCCAT AAGATCCCAC 
    AGTAGGTCTA TTTCAAGAGG TCATTCTAAT AATGGATTAG AACCCTCCTC TGAAGAGAAA 
    AATAATTCTG ACTCAAAACA GCATAATAAT GGGGATCTCA TATATGGAGT TCGTACCAAT 
    TCTAGAGGTC ATAATTCATA TGAGATTTCT AAGTTCGCAT TGCAGAAACA ATGGAGTCAG 
    TTTGAACGTC CAGATTCTTT TGATGCTTCT GAGGAGTACC ATTCTCAAGA GCTATCATTG 
    GCACTTTATC AAAGAGAAGG AATGGAATCC AAGAGAAGTA ATTTGGTTTT TCAAGATCAA 
    ATGGACAAGG TTGACTTTTC TGGACCCCTG TTATCTCAAT CACACAGAGT GGATGAACTC 
    TTAGAAAGAC ACGAGCGCCA CATTCGCCAG GCAGTCCGAA AATCATGGTT TCATAGAGGT 
    AAGAAGCATG GAAAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002317972.1
    CDS173..2230
    Translation

    Target ORF information:

    RefSeq Version XM_002317936.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0012s06960g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002317936.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    ATGGGCTGCG TGAGCGCGAA GCAGGCGGTG TCCGTCACAC CAGCGTTGGA CCATTCCGGA 
    GCGTTCAACA CGGGTCGGAT TCGGGTCGGC GTGGACCAGC ACCCAAGTTT CAAGAAGAAT 
    GGGGATCGCC GTCACCATCA TGAGATGGTG GTGAGTTGCG GAGGGAGCGA GTTGGGTGAG 
    TCAGGAAGAG CTCCAAGTTC AAATGGCGAG TCGTTGAGCT TTAGATTGAG GAATTTGCAC 
    AAGTACATTG AAGGTGAGCA GGTGGCAGCA GGTTGGCCGG CCTGGCTAAG TGCCGTCGCT 
    GGCGAAGCCA TTCACGGTTG GGTCCCTCTG AATGCTGATG GTTTTGAGAA ATTGGACAAG 
    ATAGGACAGG GTACATATAG CAGTGTGTTC CGGGCACGTG AGACTGAAAC TGGGAGGATC 
    GTTGCTCTGA AGAAGGTTCG GTTCGACAAT TTTGAGCCTG AGAGTGTCCG ATTTATGGCC 
    AGAGAGATAT TGATTCTTCG TAGACTCGAC CACCCCAATA TCATGAAATT GGACGGATTA 
    ATCACTTCGC GATTGTCATG TAGCTTATAC CTTGTCTTTG AGTACATGGA GCATGATATC 
    ACTGGACTCC TGTCATGCCC TGATGTCAGG TTCAGTGAGT CACAGATTAA GTGCTACATG 
    AGGCAATTAT TATCAGGACT TGATCACTGT CACTCAAAGG GTGTAATGCA TCGGGACATC 
    AAAGGGTCAA ATCTTCTCGT AAACAATGAA GGAATACTCA AGGTAGGAGA TTTTGGATTG 
    GCAAACTTCT GTACTTCCGG GCACAGACAA CCTTTAACCA GTCGTGTAGT GACTCTGTGG 
    TACCGTCCTC CTGAACTTTT GTTGGGTTCT ACCGATTATG GAGCATCTGT GGATCTCTGG 
    AGTGTAGGCT GTGTATTTGC AGAACTTCTT CTTGGAAAAC CTATCCTTCA AGGGAGAACA 
    GAGGTTGAAC AGTTACACAA AATTTTCAAG CTCTGTGGAT CCCCGCCTGA TGAATACTGG 
    AAAAAGTCTA AACTTCCTCA TGCAACTTTA TTCAAACCAC AACAACCTTA TGACAGTTGT 
    CTTCGTGAGA CCTTTAAAGA TTTGCCAACA ACTGCTGTGA ACCTGATTGA AACTCTTCTC 
    TCTGTAGAGC CTTACAACCG TGGGACTGCT TTTTCTGCTC TTGCATCTGA GTATTTCAGC 
    ACAAAACCTT ATGCGTGTGA TCCATCAAGC TTGCCAAAAT ACCCACCTAG CAAAGAGATT 
    GATGCAAAAA AACACGAGGA GGCAGGGAGG AAAAAGATCA GTGGGAGAGG TCGTGGCACT 
    GAAACAAGAA AGTGTACAAG AAAACCATAC GGAATCAGTA AATTGGCACC AGCAGAGGAT 
    CTAGCAGCTA GAATACAATG CGGTCAAATC AATACCAGTA ATATGCGCAT TCCAAAGGTA 
    AGAGATGGCA AGTCCGGTGG AGAGGCACGG AAGCCATCAC TTGATAAATT GGAAGAGATT 
    TTCCACATAA AGAATGCATC CCAAGGAGAC ATTCCCTTTT CTGGCCCATT ACAAGTTTCT 
    AGTTCAAGTG GTTTTGCTTG GGCAAAAAGA CGAAATGGCG ATGCATCCAT AAGATCCCAC 
    AGTAGGTCTA TTTCAAGAGG TCATTCTAAT AATGGATTAG AACCCTCCTC TGAAGAGAAA 
    AATAATTCTG ACTCAAAACA GCATAATAAT GGGGATCTCA TATATGGAGT TCGTACCAAT 
    TCTAGAGGTC ATAATTCATA TGAGATTTCT AAGTTCGCAT TGCAGAAACA ATGGAGTCAG 
    TTTGAACGTC CAGATTCTTT TGATGCTTCT GAGGAGTACC ATTCTCAAGA GCTATCATTG 
    GCACTTTATC AAAGAGAAGG AATGGAATCC AAGAGAAGTA ATTTGGTTTT TCAAGATCAA 
    ATGGACAAGG TTGACTTTTC TGGACCCCTG TTATCTCAAT CACACAGAGT GGATGAACTC 
    TTAGAAAGAC ACGAGCGCCA CATTCGCCAG GCAGTCCGAA AATCATGGTT TCATAGAGGT 
    AAGAAGCATG GAAAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7487133 ( XM_002317936.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002317972.1 Populus trichocarpa protein IMPAIRED IN BABA-INDUCED STERILITY 1 (LOC7487133), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa27126
    Clone ID Related Accession (Same CDS sequence) XM_002317936.2 , XM_002317936.3
    Accession Version XM_002317936.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2058bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product protein IMPAIRED IN BABA-INDUCED STERILITY 1 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037296.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002317936.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    ATGGGCTGCG TGAGCGCGAA GCAGGCGGTG TCCGTCACAC CAGCGTTGGA CCATTCCGGA 
    GCGTTCAACA CGGGTCGGAT TCGGGTCGGC GTGGACCAGC ACCCAAGTTT CAAGAAGAAT 
    GGGGATCGCC GTCACCATCA TGAGATGGTG GTGAGTTGCG GAGGGAGCGA GTTGGGTGAG 
    TCAGGAAGAG CTCCAAGTTC AAATGGCGAG TCGTTGAGCT TTAGATTGAG GAATTTGCAC 
    AAGTACATTG AAGGTGAGCA GGTGGCAGCA GGTTGGCCGG CCTGGCTAAG TGCCGTCGCT 
    GGCGAAGCCA TTCACGGTTG GGTCCCTCTG AATGCTGATG GTTTTGAGAA ATTGGACAAG 
    ATAGGACAGG GTACATATAG CAGTGTGTTC CGGGCACGTG AGACTGAAAC TGGGAGGATC 
    GTTGCTCTGA AGAAGGTTCG GTTCGACAAT TTTGAGCCTG AGAGTGTCCG ATTTATGGCC 
    AGAGAGATAT TGATTCTTCG TAGACTCGAC CACCCCAATA TCATGAAATT GGACGGATTA 
    ATCACTTCGC GATTGTCATG TAGCTTATAC CTTGTCTTTG AGTACATGGA GCATGATATC 
    ACTGGACTCC TGTCATGCCC TGATGTCAGG TTCAGTGAGT CACAGATTAA GTGCTACATG 
    AGGCAATTAT TATCAGGACT TGATCACTGT CACTCAAAGG GTGTAATGCA TCGGGACATC 
    AAAGGGTCAA ATCTTCTCGT AAACAATGAA GGAATACTCA AGGTAGGAGA TTTTGGATTG 
    GCAAACTTCT GTACTTCCGG GCACAGACAA CCTTTAACCA GTCGTGTAGT GACTCTGTGG 
    TACCGTCCTC CTGAACTTTT GTTGGGTTCT ACCGATTATG GAGCATCTGT GGATCTCTGG 
    AGTGTAGGCT GTGTATTTGC AGAACTTCTT CTTGGAAAAC CTATCCTTCA AGGGAGAACA 
    GAGGTTGAAC AGTTACACAA AATTTTCAAG CTCTGTGGAT CCCCGCCTGA TGAATACTGG 
    AAAAAGTCTA AACTTCCTCA TGCAACTTTA TTCAAACCAC AACAACCTTA TGACAGTTGT 
    CTTCGTGAGA CCTTTAAAGA TTTGCCAACA ACTGCTGTGA ACCTGATTGA AACTCTTCTC 
    TCTGTAGAGC CTTACAACCG TGGGACTGCT TTTTCTGCTC TTGCATCTGA GTATTTCAGC 
    ACAAAACCTT ATGCGTGTGA TCCATCAAGC TTGCCAAAAT ACCCACCTAG CAAAGAGATT 
    GATGCAAAAA AACACGAGGA GGCAGGGAGG AAAAAGATCA GTGGGAGAGG TCGTGGCACT 
    GAAACAAGAA AGTGTACAAG AAAACCATAC GGAATCAGTA AATTGGCACC AGCAGAGGAT 
    CTAGCAGCTA GAATACAATG CGGTCAAATC AATACCAGTA ATATGCGCAT TCCAAAGGTA 
    AGAGATGGCA AGTCCGGTGG AGAGGCACGG AAGCCATCAC TTGATAAATT GGAAGAGATT 
    TTCCACATAA AGAATGCATC CCAAGGAGAC ATTCCCTTTT CTGGCCCATT ACAAGTTTCT 
    AGTTCAAGTG GTTTTGCTTG GGCAAAAAGA CGAAATGGCG ATGCATCCAT AAGATCCCAC 
    AGTAGGTCTA TTTCAAGAGG TCATTCTAAT AATGGATTAG AACCCTCCTC TGAAGAGAAA 
    AATAATTCTG ACTCAAAACA GCATAATAAT GGGGATCTCA TATATGGAGT TCGTACCAAT 
    TCTAGAGGTC ATAATTCATA TGAGATTTCT AAGTTCGCAT TGCAGAAACA ATGGAGTCAG 
    TTTGAACGTC CAGATTCTTT TGATGCTTCT GAGGAGTACC ATTCTCAAGA GCTATCATTG 
    GCACTTTATC AAAGAGAAGG AATGGAATCC AAGAGAAGTA ATTTGGTTTT TCAAGATCAA 
    ATGGACAAGG TTGACTTTTC TGGACCCCTG TTATCTCAAT CACACAGAGT GGATGAACTC 
    TTAGAAAGAC ACGAGCGCCA CATTCGCCAG GCAGTCCGAA AATCATGGTT TCATAGAGGT 
    AAGAAGCATG GAAAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002317972.1
    CDS174..2231
    Translation

    Target ORF information:

    RefSeq Version XM_002317936.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa protein IMPAIRED IN BABA-INDUCED STERILITY 1 (LOC7487133), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002317936.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    ATGGGCTGCG TGAGCGCGAA GCAGGCGGTG TCCGTCACAC CAGCGTTGGA CCATTCCGGA 
    GCGTTCAACA CGGGTCGGAT TCGGGTCGGC GTGGACCAGC ACCCAAGTTT CAAGAAGAAT 
    GGGGATCGCC GTCACCATCA TGAGATGGTG GTGAGTTGCG GAGGGAGCGA GTTGGGTGAG 
    TCAGGAAGAG CTCCAAGTTC AAATGGCGAG TCGTTGAGCT TTAGATTGAG GAATTTGCAC 
    AAGTACATTG AAGGTGAGCA GGTGGCAGCA GGTTGGCCGG CCTGGCTAAG TGCCGTCGCT 
    GGCGAAGCCA TTCACGGTTG GGTCCCTCTG AATGCTGATG GTTTTGAGAA ATTGGACAAG 
    ATAGGACAGG GTACATATAG CAGTGTGTTC CGGGCACGTG AGACTGAAAC TGGGAGGATC 
    GTTGCTCTGA AGAAGGTTCG GTTCGACAAT TTTGAGCCTG AGAGTGTCCG ATTTATGGCC 
    AGAGAGATAT TGATTCTTCG TAGACTCGAC CACCCCAATA TCATGAAATT GGACGGATTA 
    ATCACTTCGC GATTGTCATG TAGCTTATAC CTTGTCTTTG AGTACATGGA GCATGATATC 
    ACTGGACTCC TGTCATGCCC TGATGTCAGG TTCAGTGAGT CACAGATTAA GTGCTACATG 
    AGGCAATTAT TATCAGGACT TGATCACTGT CACTCAAAGG GTGTAATGCA TCGGGACATC 
    AAAGGGTCAA ATCTTCTCGT AAACAATGAA GGAATACTCA AGGTAGGAGA TTTTGGATTG 
    GCAAACTTCT GTACTTCCGG GCACAGACAA CCTTTAACCA GTCGTGTAGT GACTCTGTGG 
    TACCGTCCTC CTGAACTTTT GTTGGGTTCT ACCGATTATG GAGCATCTGT GGATCTCTGG 
    AGTGTAGGCT GTGTATTTGC AGAACTTCTT CTTGGAAAAC CTATCCTTCA AGGGAGAACA 
    GAGGTTGAAC AGTTACACAA AATTTTCAAG CTCTGTGGAT CCCCGCCTGA TGAATACTGG 
    AAAAAGTCTA AACTTCCTCA TGCAACTTTA TTCAAACCAC AACAACCTTA TGACAGTTGT 
    CTTCGTGAGA CCTTTAAAGA TTTGCCAACA ACTGCTGTGA ACCTGATTGA AACTCTTCTC 
    TCTGTAGAGC CTTACAACCG TGGGACTGCT TTTTCTGCTC TTGCATCTGA GTATTTCAGC 
    ACAAAACCTT ATGCGTGTGA TCCATCAAGC TTGCCAAAAT ACCCACCTAG CAAAGAGATT 
    GATGCAAAAA AACACGAGGA GGCAGGGAGG AAAAAGATCA GTGGGAGAGG TCGTGGCACT 
    GAAACAAGAA AGTGTACAAG AAAACCATAC GGAATCAGTA AATTGGCACC AGCAGAGGAT 
    CTAGCAGCTA GAATACAATG CGGTCAAATC AATACCAGTA ATATGCGCAT TCCAAAGGTA 
    AGAGATGGCA AGTCCGGTGG AGAGGCACGG AAGCCATCAC TTGATAAATT GGAAGAGATT 
    TTCCACATAA AGAATGCATC CCAAGGAGAC ATTCCCTTTT CTGGCCCATT ACAAGTTTCT 
    AGTTCAAGTG GTTTTGCTTG GGCAAAAAGA CGAAATGGCG ATGCATCCAT AAGATCCCAC 
    AGTAGGTCTA TTTCAAGAGG TCATTCTAAT AATGGATTAG AACCCTCCTC TGAAGAGAAA 
    AATAATTCTG ACTCAAAACA GCATAATAAT GGGGATCTCA TATATGGAGT TCGTACCAAT 
    TCTAGAGGTC ATAATTCATA TGAGATTTCT AAGTTCGCAT TGCAGAAACA ATGGAGTCAG 
    TTTGAACGTC CAGATTCTTT TGATGCTTCT GAGGAGTACC ATTCTCAAGA GCTATCATTG 
    GCACTTTATC AAAGAGAAGG AATGGAATCC AAGAGAAGTA ATTTGGTTTT TCAAGATCAA 
    ATGGACAAGG TTGACTTTTC TGGACCCCTG TTATCTCAAT CACACAGAGT GGATGAACTC 
    TTAGAAAGAC ACGAGCGCCA CATTCGCCAG GCAGTCCGAA AATCATGGTT TCATAGAGGT 
    AAGAAGCATG GAAAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7487133 ( XM_024581902.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024437670.1 Populus trichocarpa protein IMPAIRED IN BABA-INDUCED STERILITY 1 (LOC7487133), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa440214
    Clone ID Related Accession (Same CDS sequence) XM_024581902.1
    Accession Version XM_024581902.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2064bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product protein IMPAIRED IN BABA-INDUCED STERILITY 1 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037296.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    ATGGGCTGCG TGAGCGCGAA GCAGGCGGTG TCCGTCACAC CAGCGTTGGA CCATTCCGGA 
    GCGTTCAACA CGGGTCGGAT TCGGGTCGGC GTGGACCAGC ACCCAAGTTT CAAGAAGAAT 
    GGGGATCGCC GTCACCATCA TGAGATGGTG GTGAGTTGCG GAGGGAGCGA GTTGGGTGAG 
    TCAGGAAGAG CTCCAAGTTC AAATGGCGAG TCGTTGAGCT TTAGATTGAG GAATTTGCAC 
    AAGTACATTG AAGGTGAGCA GGTGGCAGCA GGTTGGCCGG CCTGGCTAAG TGCCGTCGCT 
    GGCGAAGCCA TTCACGGTTG GGTCCCTCTG AATGCTGATG GTTTTGAGAA ATTGGACAAG 
    ATAGGACAGG GTACATATAG CAGTGTGTTC CGGGCACGTG AGACTGAAAC TGGGAGGATC 
    GTTGCTCTGA AGAAGGTTCG GTTCGACAAT TTTGAGCCTG AGAGTGTCCG ATTTATGGCC 
    AGAGAGATAT TGATTCTTCG TAGACTCGAC CACCCCAATA TCATGAAATT GGACGGATTA 
    ATCACTTCGC GATTGTCATG TAGCTTATAC CTTGTCTTTG AGTACATGGA GCATGATATC 
    ACTGGACTCC TGTCATGCCC TGATGTCAGG TTCAGTGAGT CACAGATTAA GTGCTACATG 
    AGGCAATTAT TATCAGGACT TGATCACTGT CACTCAAAGG GTGTAATGCA TCGGGACATC 
    AAAGGGTCAA ATCTTCTCGT AAACAATGAA GGAATACTCA AGGTAGGAGA TTTTGGATTG 
    GCAAACTTCT GTACTTCCGG GCACAGACAA CCTTTAACCA GTCGTGTAGT GACTCTGTGG 
    TACCGTCCTC CTGAACTTTT GTTGGGTTCT ACCGATTATG GAGCATCTGT GGATCTCTGG 
    AGTGTAGGCT GTGTATTTGC AGAACTTCTT CTTGGAAAAC CTATCCTTCA AGGGAGAACA 
    GAGGTTGAAC AGTTACACAA AATTTTCAAG CTCTGTGGAT CCCCGCCTGA TGAATACTGG 
    AAAAAGTCTA AACTTCCTCA TGCAACTTTA TTCAAACCAC AACAACCTTA TGACAGTTGT 
    CTTCGTGAGA CCTTTAAAGA TTTGCCAACA ACTGCTGTGA ACCTGATTGA AACTCTTCTC 
    TCTGTAGAGC CTTACAACCG TGGGACTGCT TTTTCTGCTC TTGCATCTGA GTATTTCAGC 
    ACAAAACCTT ATGCGTGTGA TCCATCAAGC TTGCCAAAAT ACCCACCTAG CAAAGAGATT 
    GATGCAAAAA AACACGAGGA GGCAGGGAGG AAAAAGATCA GTGGGAGAGG TCGTGGCACT 
    GAAACAAGAA AGTGTACAAG AAAACCATAC GGAATCAGTA AATTGGCACC AGCAGAGGAT 
    CTAGCAGCTA GAATACAATG CGGTCAAATC AATACCAGTA ATATGCGCAT TCCAAAGGTA 
    AGAGATGGCA AGTCCGGTGG AGAGGCACGG AAGCCATCAC TTGATAAATT GGAAGAGATT 
    TTCCACATAA AGAATGCATC CCAAGGAGAC ATTCCCTTTT CTGGCCCATT ACAAGTTTCT 
    AGTTCAAGTG GTTTTGCTTG GGCAAAAAGA CGAAATGGCG ATGCATCCAT AAGATCCCAC 
    AGTAGGTCTA TTTCAAGAGG TCATTCTAAT AATGGATTAG AACCCTCCTC TGAAGAGAAA 
    AATAATTCTG ACTCAAAACA GCATAATAAT GGGGATCTCA TATATGGAGT TCGTACCAAT 
    TCTAGAGGTC ATAATTCATA TGAGATTTCT AAGTTCGCAT TGCAGAAACA ATGGAGTCAG 
    TTTGAACGTC CAGATTCTTT TGATGCTTCT GAGGAGTACC ATTCTCAAGA GCTATCATTG 
    GCACTTTATC AAAGAGAAGG AATGGAATCC AAGAGAAGTA ATTTGGTTTT TCAAGATCAA 
    ATGGACAAGG TTGACTTTTC TGGACCCCTG TTATCTCAAT CACACAGAGT GGATGAACTC 
    TTAGAAAGAC ACGAGCGCCA CATTCGCCAG GCAGTCCGAA AATCATGGTT TCATAGAGTT 
    ATAGGTAAGA AGCATGGAAA GTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024437670.1
    CDS175..2238
    Translation

    Target ORF information:

    RefSeq Version XM_024581902.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa protein IMPAIRED IN BABA-INDUCED STERILITY 1 (LOC7487133), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024581902.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    ATGGGCTGCG TGAGCGCGAA GCAGGCGGTG TCCGTCACAC CAGCGTTGGA CCATTCCGGA 
    GCGTTCAACA CGGGTCGGAT TCGGGTCGGC GTGGACCAGC ACCCAAGTTT CAAGAAGAAT 
    GGGGATCGCC GTCACCATCA TGAGATGGTG GTGAGTTGCG GAGGGAGCGA GTTGGGTGAG 
    TCAGGAAGAG CTCCAAGTTC AAATGGCGAG TCGTTGAGCT TTAGATTGAG GAATTTGCAC 
    AAGTACATTG AAGGTGAGCA GGTGGCAGCA GGTTGGCCGG CCTGGCTAAG TGCCGTCGCT 
    GGCGAAGCCA TTCACGGTTG GGTCCCTCTG AATGCTGATG GTTTTGAGAA ATTGGACAAG 
    ATAGGACAGG GTACATATAG CAGTGTGTTC CGGGCACGTG AGACTGAAAC TGGGAGGATC 
    GTTGCTCTGA AGAAGGTTCG GTTCGACAAT TTTGAGCCTG AGAGTGTCCG ATTTATGGCC 
    AGAGAGATAT TGATTCTTCG TAGACTCGAC CACCCCAATA TCATGAAATT GGACGGATTA 
    ATCACTTCGC GATTGTCATG TAGCTTATAC CTTGTCTTTG AGTACATGGA GCATGATATC 
    ACTGGACTCC TGTCATGCCC TGATGTCAGG TTCAGTGAGT CACAGATTAA GTGCTACATG 
    AGGCAATTAT TATCAGGACT TGATCACTGT CACTCAAAGG GTGTAATGCA TCGGGACATC 
    AAAGGGTCAA ATCTTCTCGT AAACAATGAA GGAATACTCA AGGTAGGAGA TTTTGGATTG 
    GCAAACTTCT GTACTTCCGG GCACAGACAA CCTTTAACCA GTCGTGTAGT GACTCTGTGG 
    TACCGTCCTC CTGAACTTTT GTTGGGTTCT ACCGATTATG GAGCATCTGT GGATCTCTGG 
    AGTGTAGGCT GTGTATTTGC AGAACTTCTT CTTGGAAAAC CTATCCTTCA AGGGAGAACA 
    GAGGTTGAAC AGTTACACAA AATTTTCAAG CTCTGTGGAT CCCCGCCTGA TGAATACTGG 
    AAAAAGTCTA AACTTCCTCA TGCAACTTTA TTCAAACCAC AACAACCTTA TGACAGTTGT 
    CTTCGTGAGA CCTTTAAAGA TTTGCCAACA ACTGCTGTGA ACCTGATTGA AACTCTTCTC 
    TCTGTAGAGC CTTACAACCG TGGGACTGCT TTTTCTGCTC TTGCATCTGA GTATTTCAGC 
    ACAAAACCTT ATGCGTGTGA TCCATCAAGC TTGCCAAAAT ACCCACCTAG CAAAGAGATT 
    GATGCAAAAA AACACGAGGA GGCAGGGAGG AAAAAGATCA GTGGGAGAGG TCGTGGCACT 
    GAAACAAGAA AGTGTACAAG AAAACCATAC GGAATCAGTA AATTGGCACC AGCAGAGGAT 
    CTAGCAGCTA GAATACAATG CGGTCAAATC AATACCAGTA ATATGCGCAT TCCAAAGGTA 
    AGAGATGGCA AGTCCGGTGG AGAGGCACGG AAGCCATCAC TTGATAAATT GGAAGAGATT 
    TTCCACATAA AGAATGCATC CCAAGGAGAC ATTCCCTTTT CTGGCCCATT ACAAGTTTCT 
    AGTTCAAGTG GTTTTGCTTG GGCAAAAAGA CGAAATGGCG ATGCATCCAT AAGATCCCAC 
    AGTAGGTCTA TTTCAAGAGG TCATTCTAAT AATGGATTAG AACCCTCCTC TGAAGAGAAA 
    AATAATTCTG ACTCAAAACA GCATAATAAT GGGGATCTCA TATATGGAGT TCGTACCAAT 
    TCTAGAGGTC ATAATTCATA TGAGATTTCT AAGTTCGCAT TGCAGAAACA ATGGAGTCAG 
    TTTGAACGTC CAGATTCTTT TGATGCTTCT GAGGAGTACC ATTCTCAAGA GCTATCATTG 
    GCACTTTATC AAAGAGAAGG AATGGAATCC AAGAGAAGTA ATTTGGTTTT TCAAGATCAA 
    ATGGACAAGG TTGACTTTTC TGGACCCCTG TTATCTCAAT CACACAGAGT GGATGAACTC 
    TTAGAAAGAC ACGAGCGCCA CATTCGCCAG GCAGTCCGAA AATCATGGTT TCATAGAGTT 
    ATAGGTAAGA AGCATGGAAA GTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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