Gene Symbol
Frmd6
Entrez Gene ID
257646
Full Name
FERM domain containing 6
General protein information
Preferred NamesFERM domain containing 6
NamesFERM domain-containing protein 6 FERM domain-containing protein 163SCII
Gene Type
protein-coding
Organism
Rattus norvegicus(Norway rat)
Genome
Chromosome: 6
Map Location: 6q24
Summary
putative structural protein; presence of FERM domain suggests it may be a member of the ezrin-radixin-moesin (ERM) protein family [RGD, Feb 2006].
mRNA and Protein(s)
mRNA
Protein
Name
XM_006240151.2
XP_006240213.1
FERM domain-containing protein 6 isoform X1
XM_006240152.2
XP_006240214.1
FERM domain-containing protein 6 isoform X1
XM_006240153.2
XP_006240215.1
FERM domain-containing protein 6 isoform X1
NM_001271054.1
NP_001257983.1
FERM domain-containing protein 6
Homo sapiens (human)
FRMD6
NP_001253975.1
Canis lupus familiaris (dog)
FRMD6
XP_005623452.1
Bos taurus (cattle)
FRMD6
NP_001095603.1
Mus musculus (house mouse)
Frmd6
NP_082403.2
Gallus gallus (chicken)
FRMD6
XP_004936574.1
Xenopus tropicalis (tropical clawed frog)
frmd6
NP_001016027.1
Rattus norvegicus (Norway rat)
Frmd6
NP_001257983.1
Danio rerio (zebrafish)
frmd6
NP_001018652.1
Pan troglodytes (chimpanzee)
FRMD6
XP_001157785.1
LOC707266
XP_002808508.1
Related articles in PubMed
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Frmd6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Frmd6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
ORa10110
Clone ID Related Accession (Same CDS sequence)
NM_001271054.1
Accession Version
NM_001271054.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1845bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2018-12-14
Organism
Rattus norvegicus(Norway rat)
Product
FERM domain-containing protein 6
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07064746.1 and AABR07064747.1. On Aug 29, 2012 this sequence version replaced XM_001064688.3.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
##Evidence-Data-START##
RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348]
##Evidence-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 ATGAACAAAC TGACCTTCCA TAACAACAAA GTCATGCAGG ACCGCCGCAG AGTGTGTATT TTCCTCCCCA ATGACAAGTC TGTGAGCATC ATCATAAATG TTAAAATTCT GTGTCACCAG TTGCTGGTCC AGGTGTGTGA CCTGCTCAGG TTGAAGGATA GTCACCTCTT TGGTCTCAGT GTTATACAAA ATAATGAACA CGTATATATG GAATTGTCAC AAAAGCTCTA TAAGTATTGT CCAAAAGAAT GGAAAAAGGA GGCCAGCAAG GGCATCGACC AGTTTGGGCC TCCCATGATC ATCCATTTCC GGGTGCAGTA CTATGTGGAG AACGGGAAGC TGATCAGTGA CCGGATTGCG AGATACTATT ATTACTGGCA CCTAAGGAAA CAGGTGCTGC ACTCTCAGTG TGTGCTCAGA GAGGAGGCCT ACTTCCTGCT GGCAGCCTTT GCACTGCAGG CTGACCTCGG GAACTTCAAA AGGAAAGTGC ACCATGGAGA CTACTTTGAG CCAGAGGCTT ACTTCCCAGC ATGGGTGGTT TCCAAGCGGG GGAAGGACTA CATCCTGAAA CACATTCCAA ACATGCACAG AGACCAGTTT GCACTGACAG CCTCCGAGGC ATATCTAAAG TACATCAAAG AGGCCGTCCG ACTGGATGAC GTCGCCATCC ATTACTACAG ACTGTACAAG GATAAAAGAG AGGTTGAAGG TTCACTGACC CTGGGACTGA CCATGCGAGG GATACAGATC TTTCAGAATC TAGAAGAAGA GAAACAGTTG CTGTATGATT TCCCCTGGAC AAATGTTGGG AAGTTGGTGT TTGTGGGCAA GAAGTTTGAG ATTTTGCCCG ATGGCCTCCC CTCCGCCAGG AAGCTGGTCT ACTACACCGG GTGTCCCACA CGCTCCCGGC ATCTCCTGCA GCTGCTGAGC AACAGCCACC GGCTCTACAT GAACCTGCAG CCCGTCCTGC GCCACCTCCG CAAGCAGGAG GAGAATGAAG AGAAAAAGCA GTACCGGGAA TCCTACATCA GTGACAACCT GGACCTTGAC ATGGACCCGC TGGAAAAGCG ATCCCGTGCC AGCGGGAGCA GCGCTGGCAG CATGAAGCAC AAGCGTTTGT CCCGCCACTC CACGGCCAGC CACAGCAGCT CCCACACGTC AGGCATCGAG ACAGACACTA AGCCCCGGGA CCCAGGGCCA GAAGATGGCT ATTCAGGCAG CGTCATGCAT CGAAAGCTGA AGACCTGTAG CTCCATGACC AGCCACGGCA GCTCCCACAC CTCAGGCGTT GAAAGTGGAG GCAAAGACCG CCTGGAGGAG GACTCGCAAG ATGATGAAAT AGAGATGCTG GTTGATGACC CCCGGGACCT GGAGCCCATG ACCGAAGAGT CCCTGGAAGT GAGCCCAGAG ATGTGTATCT ACATCACACA AGACATGCTG CTGTCCAGGA AGCTGAACGG GCACTCAGGG TTAATTGTGA AAGAAATCAG TTCTTCCACC TCCAGCTCCT CGGAGACGGT TGTCAAGCTG CGTGGACAGA GCACTGACTC TCTTCCACAG ACGATATGTC GAAAACCAAA GACTTCCACT GATCGGCATA GCCTGAGCCT TGACGACATC AGACTGTACC AGAAAGACTT CCTGCGCATC GCAGGCCTGT GTCAGGACAC TGCTCAGAGC TACACGTTCG GGTGTGGCCA TGAACTGGAT GAGAGCGGTC TCTACTGCGA CAGCTGCTTG GCTCAGCAGT GTGTCAACAT GCATGACGCT TTCCCCGTGA AGAGAACCAG CAAGTACTTT TCTCTGGACC TCACTCACGA CGAGGTCCCA GAGTTCCTTG TCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001257983.1
CDS 263..2107
Translation
Target ORF information:
RefSeq Version NM_001271054.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus FERM domain containing 6 (Frmd6), mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001271054.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 ATGAACAAAC TGACCTTCCA TAACAACAAA GTCATGCAGG ACCGCCGCAG AGTGTGTATT TTCCTCCCCA ATGACAAGTC TGTGAGCATC ATCATAAATG TTAAAATTCT GTGTCACCAG TTGCTGGTCC AGGTGTGTGA CCTGCTCAGG TTGAAGGATA GTCACCTCTT TGGTCTCAGT GTTATACAAA ATAATGAACA CGTATATATG GAATTGTCAC AAAAGCTCTA TAAGTATTGT CCAAAAGAAT GGAAAAAGGA GGCCAGCAAG GGCATCGACC AGTTTGGGCC TCCCATGATC ATCCATTTCC GGGTGCAGTA CTATGTGGAG AACGGGAAGC TGATCAGTGA CCGGATTGCG AGATACTATT ATTACTGGCA CCTAAGGAAA CAGGTGCTGC ACTCTCAGTG TGTGCTCAGA GAGGAGGCCT ACTTCCTGCT GGCAGCCTTT GCACTGCAGG CTGACCTCGG GAACTTCAAA AGGAAAGTGC ACCATGGAGA CTACTTTGAG CCAGAGGCTT ACTTCCCAGC ATGGGTGGTT TCCAAGCGGG GGAAGGACTA CATCCTGAAA CACATTCCAA ACATGCACAG AGACCAGTTT GCACTGACAG CCTCCGAGGC ATATCTAAAG TACATCAAAG AGGCCGTCCG ACTGGATGAC GTCGCCATCC ATTACTACAG ACTGTACAAG GATAAAAGAG AGGTTGAAGG TTCACTGACC CTGGGACTGA CCATGCGAGG GATACAGATC TTTCAGAATC TAGAAGAAGA GAAACAGTTG CTGTATGATT TCCCCTGGAC AAATGTTGGG AAGTTGGTGT TTGTGGGCAA GAAGTTTGAG ATTTTGCCCG ATGGCCTCCC CTCCGCCAGG AAGCTGGTCT ACTACACCGG GTGTCCCACA CGCTCCCGGC ATCTCCTGCA GCTGCTGAGC AACAGCCACC GGCTCTACAT GAACCTGCAG CCCGTCCTGC GCCACCTCCG CAAGCAGGAG GAGAATGAAG AGAAAAAGCA GTACCGGGAA TCCTACATCA GTGACAACCT GGACCTTGAC ATGGACCCGC TGGAAAAGCG ATCCCGTGCC AGCGGGAGCA GCGCTGGCAG CATGAAGCAC AAGCGTTTGT CCCGCCACTC CACGGCCAGC CACAGCAGCT CCCACACGTC AGGCATCGAG ACAGACACTA AGCCCCGGGA CCCAGGGCCA GAAGATGGCT ATTCAGGCAG CGTCATGCAT CGAAAGCTGA AGACCTGTAG CTCCATGACC AGCCACGGCA GCTCCCACAC CTCAGGCGTT GAAAGTGGAG GCAAAGACCG CCTGGAGGAG GACTCGCAAG ATGATGAAAT AGAGATGCTG GTTGATGACC CCCGGGACCT GGAGCCCATG ACCGAAGAGT CCCTGGAAGT GAGCCCAGAG ATGTGTATCT ACATCACACA AGACATGCTG CTGTCCAGGA AGCTGAACGG GCACTCAGGG TTAATTGTGA AAGAAATCAG TTCTTCCACC TCCAGCTCCT CGGAGACGGT TGTCAAGCTG CGTGGACAGA GCACTGACTC TCTTCCACAG ACGATATGTC GAAAACCAAA GACTTCCACT GATCGGCATA GCCTGAGCCT TGACGACATC AGACTGTACC AGAAAGACTT CCTGCGCATC GCAGGCCTGT GTCAGGACAC TGCTCAGAGC TACACGTTCG GGTGTGGCCA TGAACTGGAT GAGAGCGGTC TCTACTGCGA CAGCTGCTTG GCTCAGCAGT GTGTCAACAT GCATGACGCT TTCCCCGTGA AGAGAACCAG CAAGTACTTT TCTCTGGACC TCACTCACGA CGAGGTCCCA GAGTTCCTTG TCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa29367
Clone ID Related Accession (Same CDS sequence)
XM_006240151.2
, XM_006240152.2
, XM_006240153.2
Accession Version
XM_006240151.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1869bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
FERM domain-containing protein 6 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005105.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Aug 7, 2014 this sequence version replaced XM_006240151.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 ATGAACAAAC TGACCTTCCA TAACAACAAA GTCATGCAGG ACCGCCGCAG AGTGTGTATT TTCCTCCCCA ATGACAAGTC TGTGAGCATC ATCATAAATG TTAAAATTCT GTGTCACCAG TTGCTGGTCC AGGTGTGTGA CCTGCTCAGG TTGAAGGATA GTCACCTCTT TGGTCTCAGT GTTATACAAA ATAATGAACA CGTATATATG GAATTGTCAC AAAAGCTCTA TAAGTATTGT CCAAAAGAAT GGAAAAAGGA GGCCAGCAAG GTACGACAAT ACGAAGTCAC TTGGGGCATC GACCAGTTTG GGCCTCCCAT GATCATCCAT TTCCGGGTGC AGTACTATGT GGAGAACGGG AAGCTGATCA GTGACCGGAT TGCGAGATAC TATTATTACT GGCACCTAAG GAAACAGGTG CTGCACTCTC AGTGTGTGCT CAGAGAGGAG GCCTACTTCC TGCTGGCAGC CTTTGCACTG CAGGCTGACC TCGGGAACTT CAAAAGGAAA GTGCACCATG GAGACTACTT TGAGCCAGAG GCTTACTTCC CAGCATGGGT GGTTTCCAAG CGGGGGAAGG ACTACATCCT GAAACACATT CCAAACATGC ACAGAGACCA GTTTGCACTG ACAGCCTCCG AGGCATATCT AAAGTACATC AAAGAGGCCG TCCGACTGGA TGACGTCGCC ATCCATTACT ACAGACTGTA CAAGGATAAA AGAGAGGTTG AAGGTTCACT GACCCTGGGA CTGACCATGC GAGGGATACA GATCTTTCAG AATCTAGAAG AAGAGAAACA GTTGCTGTAT GATTTCCCCT GGACAAATGT TGGGAAGTTG GTGTTTGTGG GCAAGAAGTT TGAGATTTTG CCCGATGGCC TCCCCTCCGC CAGGAAGCTG GTCTACTACA CCGGGTGTCC CACACGCTCC CGGCATCTCC TGCAGCTGCT GAGCAACAGC CACCGGCTCT ACATGAACCT GCAGCCCGTC CTGCGCCACC TCCGCAAGCA GGAGGAGAAT GAAGAGAAAA AGCAGTACCG GGAATCCTAC ATCAGTGACA ACCTGGACCT TGACATGGAC CCGCTGGAAA AGCGATCCCG TGCCAGCGGG AGCAGCGCTG GCAGCATGAA GCACAAGCGT TTGTCCCGCC ACTCCACGGC CAGCCACAGC AGCTCCCACA CGTCAGGCAT CGAGACAGAC ACTAAGCCCC GGGACCCAGG GCCAGAAGAT GGCTATTCAG GCAGCGTCAT GCATCGAAAG CTGAAGACCT GTAGCTCCAT GACCAGCCAC GGCAGCTCCC ACACCTCAGG CGTTGAAAGT GGAGGCAAAG ACCGCCTGGA GGAGGACTCG CAAGATGATG AAATAGAGAT GCTGGTTGAT GACCCCCGGG ACCTGGAGCC CATGACCGAA GAGTCCCTGG AAGTGAGCCC AGAGATGTGT ATCTACATCA CACAAGACAT GCTGCTGTCC AGGAAGCTGA ACGGGCACTC AGGGTTAATT GTGAAAGAAA TCAGTTCTTC CACCTCCAGC TCCTCGGAGA CGGTTGTCAA GCTGCGTGGA CAGAGCACTG ACTCTCTTCC ACAGACGATA TGTCGAAAAC CAAAGACTTC CACTGATCGG CATAGCCTGA GCCTTGACGA CATCAGACTG TACCAGAAAG ACTTCCTGCG CATCGCAGGC CTGTGTCAGG ACACTGCTCA GAGCTACACG TTCGGGTGTG GCCATGAACT GGATGAGAGC GGTCTCTACT GCGACAGCTG CTTGGCTCAG CAGTGTGTCA ACATGCATGA CGCTTTCCCC GTGAAGAGAA CCAGCAAGTA CTTTTCTCTG GACCTCACTC ACGACGAGGT CCCAGAGTTC CTTGTCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006240213.1
CDS 289..2157
Translation
Target ORF information:
RefSeq Version XM_006240151.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus FERM domain containing 6 (Frmd6), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006240151.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 ATGAACAAAC TGACCTTCCA TAACAACAAA GTCATGCAGG ACCGCCGCAG AGTGTGTATT TTCCTCCCCA ATGACAAGTC TGTGAGCATC ATCATAAATG TTAAAATTCT GTGTCACCAG TTGCTGGTCC AGGTGTGTGA CCTGCTCAGG TTGAAGGATA GTCACCTCTT TGGTCTCAGT GTTATACAAA ATAATGAACA CGTATATATG GAATTGTCAC AAAAGCTCTA TAAGTATTGT CCAAAAGAAT GGAAAAAGGA GGCCAGCAAG GTACGACAAT ACGAAGTCAC TTGGGGCATC GACCAGTTTG GGCCTCCCAT GATCATCCAT TTCCGGGTGC AGTACTATGT GGAGAACGGG AAGCTGATCA GTGACCGGAT TGCGAGATAC TATTATTACT GGCACCTAAG GAAACAGGTG CTGCACTCTC AGTGTGTGCT CAGAGAGGAG GCCTACTTCC TGCTGGCAGC CTTTGCACTG CAGGCTGACC TCGGGAACTT CAAAAGGAAA GTGCACCATG GAGACTACTT TGAGCCAGAG GCTTACTTCC CAGCATGGGT GGTTTCCAAG CGGGGGAAGG ACTACATCCT GAAACACATT CCAAACATGC ACAGAGACCA GTTTGCACTG ACAGCCTCCG AGGCATATCT AAAGTACATC AAAGAGGCCG TCCGACTGGA TGACGTCGCC ATCCATTACT ACAGACTGTA CAAGGATAAA AGAGAGGTTG AAGGTTCACT GACCCTGGGA CTGACCATGC GAGGGATACA GATCTTTCAG AATCTAGAAG AAGAGAAACA GTTGCTGTAT GATTTCCCCT GGACAAATGT TGGGAAGTTG GTGTTTGTGG GCAAGAAGTT TGAGATTTTG CCCGATGGCC TCCCCTCCGC CAGGAAGCTG GTCTACTACA CCGGGTGTCC CACACGCTCC CGGCATCTCC TGCAGCTGCT GAGCAACAGC CACCGGCTCT ACATGAACCT GCAGCCCGTC CTGCGCCACC TCCGCAAGCA GGAGGAGAAT GAAGAGAAAA AGCAGTACCG GGAATCCTAC ATCAGTGACA ACCTGGACCT TGACATGGAC CCGCTGGAAA AGCGATCCCG TGCCAGCGGG AGCAGCGCTG GCAGCATGAA GCACAAGCGT TTGTCCCGCC ACTCCACGGC CAGCCACAGC AGCTCCCACA CGTCAGGCAT CGAGACAGAC ACTAAGCCCC GGGACCCAGG GCCAGAAGAT GGCTATTCAG GCAGCGTCAT GCATCGAAAG CTGAAGACCT GTAGCTCCAT GACCAGCCAC GGCAGCTCCC ACACCTCAGG CGTTGAAAGT GGAGGCAAAG ACCGCCTGGA GGAGGACTCG CAAGATGATG AAATAGAGAT GCTGGTTGAT GACCCCCGGG ACCTGGAGCC CATGACCGAA GAGTCCCTGG AAGTGAGCCC AGAGATGTGT ATCTACATCA CACAAGACAT GCTGCTGTCC AGGAAGCTGA ACGGGCACTC AGGGTTAATT GTGAAAGAAA TCAGTTCTTC CACCTCCAGC TCCTCGGAGA CGGTTGTCAA GCTGCGTGGA CAGAGCACTG ACTCTCTTCC ACAGACGATA TGTCGAAAAC CAAAGACTTC CACTGATCGG CATAGCCTGA GCCTTGACGA CATCAGACTG TACCAGAAAG ACTTCCTGCG CATCGCAGGC CTGTGTCAGG ACACTGCTCA GAGCTACACG TTCGGGTGTG GCCATGAACT GGATGAGAGC GGTCTCTACT GCGACAGCTG CTTGGCTCAG CAGTGTGTCA ACATGCATGA CGCTTTCCCC GTGAAGAGAA CCAGCAAGTA CTTTTCTCTG GACCTCACTC ACGACGAGGT CCCAGAGTTC CTTGTCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa29367
Clone ID Related Accession (Same CDS sequence)
XM_006240151.2
, XM_006240152.2
, XM_006240153.2
Accession Version
XM_006240152.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1869bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
FERM domain-containing protein 6 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005105.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Aug 7, 2014 this sequence version replaced XM_006240152.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 ATGAACAAAC TGACCTTCCA TAACAACAAA GTCATGCAGG ACCGCCGCAG AGTGTGTATT TTCCTCCCCA ATGACAAGTC TGTGAGCATC ATCATAAATG TTAAAATTCT GTGTCACCAG TTGCTGGTCC AGGTGTGTGA CCTGCTCAGG TTGAAGGATA GTCACCTCTT TGGTCTCAGT GTTATACAAA ATAATGAACA CGTATATATG GAATTGTCAC AAAAGCTCTA TAAGTATTGT CCAAAAGAAT GGAAAAAGGA GGCCAGCAAG GTACGACAAT ACGAAGTCAC TTGGGGCATC GACCAGTTTG GGCCTCCCAT GATCATCCAT TTCCGGGTGC AGTACTATGT GGAGAACGGG AAGCTGATCA GTGACCGGAT TGCGAGATAC TATTATTACT GGCACCTAAG GAAACAGGTG CTGCACTCTC AGTGTGTGCT CAGAGAGGAG GCCTACTTCC TGCTGGCAGC CTTTGCACTG CAGGCTGACC TCGGGAACTT CAAAAGGAAA GTGCACCATG GAGACTACTT TGAGCCAGAG GCTTACTTCC CAGCATGGGT GGTTTCCAAG CGGGGGAAGG ACTACATCCT GAAACACATT CCAAACATGC ACAGAGACCA GTTTGCACTG ACAGCCTCCG AGGCATATCT AAAGTACATC AAAGAGGCCG TCCGACTGGA TGACGTCGCC ATCCATTACT ACAGACTGTA CAAGGATAAA AGAGAGGTTG AAGGTTCACT GACCCTGGGA CTGACCATGC GAGGGATACA GATCTTTCAG AATCTAGAAG AAGAGAAACA GTTGCTGTAT GATTTCCCCT GGACAAATGT TGGGAAGTTG GTGTTTGTGG GCAAGAAGTT TGAGATTTTG CCCGATGGCC TCCCCTCCGC CAGGAAGCTG GTCTACTACA CCGGGTGTCC CACACGCTCC CGGCATCTCC TGCAGCTGCT GAGCAACAGC CACCGGCTCT ACATGAACCT GCAGCCCGTC CTGCGCCACC TCCGCAAGCA GGAGGAGAAT GAAGAGAAAA AGCAGTACCG GGAATCCTAC ATCAGTGACA ACCTGGACCT TGACATGGAC CCGCTGGAAA AGCGATCCCG TGCCAGCGGG AGCAGCGCTG GCAGCATGAA GCACAAGCGT TTGTCCCGCC ACTCCACGGC CAGCCACAGC AGCTCCCACA CGTCAGGCAT CGAGACAGAC ACTAAGCCCC GGGACCCAGG GCCAGAAGAT GGCTATTCAG GCAGCGTCAT GCATCGAAAG CTGAAGACCT GTAGCTCCAT GACCAGCCAC GGCAGCTCCC ACACCTCAGG CGTTGAAAGT GGAGGCAAAG ACCGCCTGGA GGAGGACTCG CAAGATGATG AAATAGAGAT GCTGGTTGAT GACCCCCGGG ACCTGGAGCC CATGACCGAA GAGTCCCTGG AAGTGAGCCC AGAGATGTGT ATCTACATCA CACAAGACAT GCTGCTGTCC AGGAAGCTGA ACGGGCACTC AGGGTTAATT GTGAAAGAAA TCAGTTCTTC CACCTCCAGC TCCTCGGAGA CGGTTGTCAA GCTGCGTGGA CAGAGCACTG ACTCTCTTCC ACAGACGATA TGTCGAAAAC CAAAGACTTC CACTGATCGG CATAGCCTGA GCCTTGACGA CATCAGACTG TACCAGAAAG ACTTCCTGCG CATCGCAGGC CTGTGTCAGG ACACTGCTCA GAGCTACACG TTCGGGTGTG GCCATGAACT GGATGAGAGC GGTCTCTACT GCGACAGCTG CTTGGCTCAG CAGTGTGTCA ACATGCATGA CGCTTTCCCC GTGAAGAGAA CCAGCAAGTA CTTTTCTCTG GACCTCACTC ACGACGAGGT CCCAGAGTTC CTTGTCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006240214.1
CDS 369..2237
Translation
Target ORF information:
RefSeq Version XM_006240152.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus FERM domain containing 6 (Frmd6), transcript variant X2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006240152.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 ATGAACAAAC TGACCTTCCA TAACAACAAA GTCATGCAGG ACCGCCGCAG AGTGTGTATT TTCCTCCCCA ATGACAAGTC TGTGAGCATC ATCATAAATG TTAAAATTCT GTGTCACCAG TTGCTGGTCC AGGTGTGTGA CCTGCTCAGG TTGAAGGATA GTCACCTCTT TGGTCTCAGT GTTATACAAA ATAATGAACA CGTATATATG GAATTGTCAC AAAAGCTCTA TAAGTATTGT CCAAAAGAAT GGAAAAAGGA GGCCAGCAAG GTACGACAAT ACGAAGTCAC TTGGGGCATC GACCAGTTTG GGCCTCCCAT GATCATCCAT TTCCGGGTGC AGTACTATGT GGAGAACGGG AAGCTGATCA GTGACCGGAT TGCGAGATAC TATTATTACT GGCACCTAAG GAAACAGGTG CTGCACTCTC AGTGTGTGCT CAGAGAGGAG GCCTACTTCC TGCTGGCAGC CTTTGCACTG CAGGCTGACC TCGGGAACTT CAAAAGGAAA GTGCACCATG GAGACTACTT TGAGCCAGAG GCTTACTTCC CAGCATGGGT GGTTTCCAAG CGGGGGAAGG ACTACATCCT GAAACACATT CCAAACATGC ACAGAGACCA GTTTGCACTG ACAGCCTCCG AGGCATATCT AAAGTACATC AAAGAGGCCG TCCGACTGGA TGACGTCGCC ATCCATTACT ACAGACTGTA CAAGGATAAA AGAGAGGTTG AAGGTTCACT GACCCTGGGA CTGACCATGC GAGGGATACA GATCTTTCAG AATCTAGAAG AAGAGAAACA GTTGCTGTAT GATTTCCCCT GGACAAATGT TGGGAAGTTG GTGTTTGTGG GCAAGAAGTT TGAGATTTTG CCCGATGGCC TCCCCTCCGC CAGGAAGCTG GTCTACTACA CCGGGTGTCC CACACGCTCC CGGCATCTCC TGCAGCTGCT GAGCAACAGC CACCGGCTCT ACATGAACCT GCAGCCCGTC CTGCGCCACC TCCGCAAGCA GGAGGAGAAT GAAGAGAAAA AGCAGTACCG GGAATCCTAC ATCAGTGACA ACCTGGACCT TGACATGGAC CCGCTGGAAA AGCGATCCCG TGCCAGCGGG AGCAGCGCTG GCAGCATGAA GCACAAGCGT TTGTCCCGCC ACTCCACGGC CAGCCACAGC AGCTCCCACA CGTCAGGCAT CGAGACAGAC ACTAAGCCCC GGGACCCAGG GCCAGAAGAT GGCTATTCAG GCAGCGTCAT GCATCGAAAG CTGAAGACCT GTAGCTCCAT GACCAGCCAC GGCAGCTCCC ACACCTCAGG CGTTGAAAGT GGAGGCAAAG ACCGCCTGGA GGAGGACTCG CAAGATGATG AAATAGAGAT GCTGGTTGAT GACCCCCGGG ACCTGGAGCC CATGACCGAA GAGTCCCTGG AAGTGAGCCC AGAGATGTGT ATCTACATCA CACAAGACAT GCTGCTGTCC AGGAAGCTGA ACGGGCACTC AGGGTTAATT GTGAAAGAAA TCAGTTCTTC CACCTCCAGC TCCTCGGAGA CGGTTGTCAA GCTGCGTGGA CAGAGCACTG ACTCTCTTCC ACAGACGATA TGTCGAAAAC CAAAGACTTC CACTGATCGG CATAGCCTGA GCCTTGACGA CATCAGACTG TACCAGAAAG ACTTCCTGCG CATCGCAGGC CTGTGTCAGG ACACTGCTCA GAGCTACACG TTCGGGTGTG GCCATGAACT GGATGAGAGC GGTCTCTACT GCGACAGCTG CTTGGCTCAG CAGTGTGTCA ACATGCATGA CGCTTTCCCC GTGAAGAGAA CCAGCAAGTA CTTTTCTCTG GACCTCACTC ACGACGAGGT CCCAGAGTTC CTTGTCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa29367
Clone ID Related Accession (Same CDS sequence)
XM_006240151.2
, XM_006240152.2
, XM_006240153.2
Accession Version
XM_006240153.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1869bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
FERM domain-containing protein 6 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005105.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Aug 7, 2014 this sequence version replaced XM_006240153.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 ATGAACAAAC TGACCTTCCA TAACAACAAA GTCATGCAGG ACCGCCGCAG AGTGTGTATT TTCCTCCCCA ATGACAAGTC TGTGAGCATC ATCATAAATG TTAAAATTCT GTGTCACCAG TTGCTGGTCC AGGTGTGTGA CCTGCTCAGG TTGAAGGATA GTCACCTCTT TGGTCTCAGT GTTATACAAA ATAATGAACA CGTATATATG GAATTGTCAC AAAAGCTCTA TAAGTATTGT CCAAAAGAAT GGAAAAAGGA GGCCAGCAAG GTACGACAAT ACGAAGTCAC TTGGGGCATC GACCAGTTTG GGCCTCCCAT GATCATCCAT TTCCGGGTGC AGTACTATGT GGAGAACGGG AAGCTGATCA GTGACCGGAT TGCGAGATAC TATTATTACT GGCACCTAAG GAAACAGGTG CTGCACTCTC AGTGTGTGCT CAGAGAGGAG GCCTACTTCC TGCTGGCAGC CTTTGCACTG CAGGCTGACC TCGGGAACTT CAAAAGGAAA GTGCACCATG GAGACTACTT TGAGCCAGAG GCTTACTTCC CAGCATGGGT GGTTTCCAAG CGGGGGAAGG ACTACATCCT GAAACACATT CCAAACATGC ACAGAGACCA GTTTGCACTG ACAGCCTCCG AGGCATATCT AAAGTACATC AAAGAGGCCG TCCGACTGGA TGACGTCGCC ATCCATTACT ACAGACTGTA CAAGGATAAA AGAGAGGTTG AAGGTTCACT GACCCTGGGA CTGACCATGC GAGGGATACA GATCTTTCAG AATCTAGAAG AAGAGAAACA GTTGCTGTAT GATTTCCCCT GGACAAATGT TGGGAAGTTG GTGTTTGTGG GCAAGAAGTT TGAGATTTTG CCCGATGGCC TCCCCTCCGC CAGGAAGCTG GTCTACTACA CCGGGTGTCC CACACGCTCC CGGCATCTCC TGCAGCTGCT GAGCAACAGC CACCGGCTCT ACATGAACCT GCAGCCCGTC CTGCGCCACC TCCGCAAGCA GGAGGAGAAT GAAGAGAAAA AGCAGTACCG GGAATCCTAC ATCAGTGACA ACCTGGACCT TGACATGGAC CCGCTGGAAA AGCGATCCCG TGCCAGCGGG AGCAGCGCTG GCAGCATGAA GCACAAGCGT TTGTCCCGCC ACTCCACGGC CAGCCACAGC AGCTCCCACA CGTCAGGCAT CGAGACAGAC ACTAAGCCCC GGGACCCAGG GCCAGAAGAT GGCTATTCAG GCAGCGTCAT GCATCGAAAG CTGAAGACCT GTAGCTCCAT GACCAGCCAC GGCAGCTCCC ACACCTCAGG CGTTGAAAGT GGAGGCAAAG ACCGCCTGGA GGAGGACTCG CAAGATGATG AAATAGAGAT GCTGGTTGAT GACCCCCGGG ACCTGGAGCC CATGACCGAA GAGTCCCTGG AAGTGAGCCC AGAGATGTGT ATCTACATCA CACAAGACAT GCTGCTGTCC AGGAAGCTGA ACGGGCACTC AGGGTTAATT GTGAAAGAAA TCAGTTCTTC CACCTCCAGC TCCTCGGAGA CGGTTGTCAA GCTGCGTGGA CAGAGCACTG ACTCTCTTCC ACAGACGATA TGTCGAAAAC CAAAGACTTC CACTGATCGG CATAGCCTGA GCCTTGACGA CATCAGACTG TACCAGAAAG ACTTCCTGCG CATCGCAGGC CTGTGTCAGG ACACTGCTCA GAGCTACACG TTCGGGTGTG GCCATGAACT GGATGAGAGC GGTCTCTACT GCGACAGCTG CTTGGCTCAG CAGTGTGTCA ACATGCATGA CGCTTTCCCC GTGAAGAGAA CCAGCAAGTA CTTTTCTCTG GACCTCACTC ACGACGAGGT CCCAGAGTTC CTTGTCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006240215.1
CDS 713..2581
Translation
Target ORF information:
RefSeq Version XM_006240153.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus FERM domain containing 6 (Frmd6), transcript variant X3, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006240153.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 ATGAACAAAC TGACCTTCCA TAACAACAAA GTCATGCAGG ACCGCCGCAG AGTGTGTATT TTCCTCCCCA ATGACAAGTC TGTGAGCATC ATCATAAATG TTAAAATTCT GTGTCACCAG TTGCTGGTCC AGGTGTGTGA CCTGCTCAGG TTGAAGGATA GTCACCTCTT TGGTCTCAGT GTTATACAAA ATAATGAACA CGTATATATG GAATTGTCAC AAAAGCTCTA TAAGTATTGT CCAAAAGAAT GGAAAAAGGA GGCCAGCAAG GTACGACAAT ACGAAGTCAC TTGGGGCATC GACCAGTTTG GGCCTCCCAT GATCATCCAT TTCCGGGTGC AGTACTATGT GGAGAACGGG AAGCTGATCA GTGACCGGAT TGCGAGATAC TATTATTACT GGCACCTAAG GAAACAGGTG CTGCACTCTC AGTGTGTGCT CAGAGAGGAG GCCTACTTCC TGCTGGCAGC CTTTGCACTG CAGGCTGACC TCGGGAACTT CAAAAGGAAA GTGCACCATG GAGACTACTT TGAGCCAGAG GCTTACTTCC CAGCATGGGT GGTTTCCAAG CGGGGGAAGG ACTACATCCT GAAACACATT CCAAACATGC ACAGAGACCA GTTTGCACTG ACAGCCTCCG AGGCATATCT AAAGTACATC AAAGAGGCCG TCCGACTGGA TGACGTCGCC ATCCATTACT ACAGACTGTA CAAGGATAAA AGAGAGGTTG AAGGTTCACT GACCCTGGGA CTGACCATGC GAGGGATACA GATCTTTCAG AATCTAGAAG AAGAGAAACA GTTGCTGTAT GATTTCCCCT GGACAAATGT TGGGAAGTTG GTGTTTGTGG GCAAGAAGTT TGAGATTTTG CCCGATGGCC TCCCCTCCGC CAGGAAGCTG GTCTACTACA CCGGGTGTCC CACACGCTCC CGGCATCTCC TGCAGCTGCT GAGCAACAGC CACCGGCTCT ACATGAACCT GCAGCCCGTC CTGCGCCACC TCCGCAAGCA GGAGGAGAAT GAAGAGAAAA AGCAGTACCG GGAATCCTAC ATCAGTGACA ACCTGGACCT TGACATGGAC CCGCTGGAAA AGCGATCCCG TGCCAGCGGG AGCAGCGCTG GCAGCATGAA GCACAAGCGT TTGTCCCGCC ACTCCACGGC CAGCCACAGC AGCTCCCACA CGTCAGGCAT CGAGACAGAC ACTAAGCCCC GGGACCCAGG GCCAGAAGAT GGCTATTCAG GCAGCGTCAT GCATCGAAAG CTGAAGACCT GTAGCTCCAT GACCAGCCAC GGCAGCTCCC ACACCTCAGG CGTTGAAAGT GGAGGCAAAG ACCGCCTGGA GGAGGACTCG CAAGATGATG AAATAGAGAT GCTGGTTGAT GACCCCCGGG ACCTGGAGCC CATGACCGAA GAGTCCCTGG AAGTGAGCCC AGAGATGTGT ATCTACATCA CACAAGACAT GCTGCTGTCC AGGAAGCTGA ACGGGCACTC AGGGTTAATT GTGAAAGAAA TCAGTTCTTC CACCTCCAGC TCCTCGGAGA CGGTTGTCAA GCTGCGTGGA CAGAGCACTG ACTCTCTTCC ACAGACGATA TGTCGAAAAC CAAAGACTTC CACTGATCGG CATAGCCTGA GCCTTGACGA CATCAGACTG TACCAGAAAG ACTTCCTGCG CATCGCAGGC CTGTGTCAGG ACACTGCTCA GAGCTACACG TTCGGGTGTG GCCATGAACT GGATGAGAGC GGTCTCTACT GCGACAGCTG CTTGGCTCAG CAGTGTGTCA ACATGCATGA CGCTTTCCCC GTGAAGAGAA CCAGCAAGTA CTTTTCTCTG GACCTCACTC ACGACGAGGT CCCAGAGTTC CTTGTCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.