Gene Symbol | Taf6 |
Entrez Gene ID | 288533 |
Full Name | TATA-box binding protein associated factor 6 |
Synonyms | TAF(II)80,TAFII70 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Taf6 cDNA ORF clone
Gene Symbol | Taf6 |
Entrez Gene ID | 288533 |
Full Name | TATA-box binding protein associated factor 6 |
Synonyms | TAF(II)80,TAFII70 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_008769062.2 | XP_008767284.1 | transcription initiation factor TFIID subunit 6 isoform X1 |
XM_008769061.2 | XP_008767283.1 | transcription initiation factor TFIID subunit 6 isoform X1 |
XM_017598294.1 | XP_017453783.1 | transcription initiation factor TFIID subunit 6 isoform X1 |
NM_001044225.1 | NP_001037690.1 | transcription initiation factor TFIID subunit 6 |
Canis lupus familiaris (dog) | TAF6 | XP_546964.2 |
Rattus norvegicus (Norway rat) | Taf6 | NP_001037690.1 |
Danio rerio (zebrafish) | taf6 | NP_001004557.1 |
Drosophila melanogaster (fruit fly) | Taf6 | NP_001262056.1 |
Caenorhabditis elegans (roundworm) | taf-6.1 | NP_493919.1 |
Kluyveromyces lactis | KLLA0F10659g | XP_455565.1 |
Homo sapiens (human) | TAF6 | NP_001177344.1 |
Saccharomyces cerevisiae (baker's yeast) | TAF6 | NP_011403.1 |
Schizosaccharomyces pombe (fission yeast) | taf6 | NP_587928.1 |
Xenopus tropicalis (tropical clawed frog) | taf6 | XP_004919136.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004254 | XP_313173.5 |
Magnaporthe oryzae (rice blast fungus) | MGG_04877 | XP_003712358.1 |
Mus musculus (house mouse) | Taf6 | NP_033341.1 |
Pan troglodytes (chimpanzee) | TAF6 | XP_003318659.1 |
Bos taurus (cattle) | TAF6 | NP_001015525.1 |
Eremothecium gossypii | AGOS_AFL020W | NP_985528.1 |
Neurospora crassa | NCU07757 | XP_958550.1 |
Structure of promoter-bound TFIID and model of human pre-initiation complex assembly.
Louder RK, He Y, L?pez-Blanco JR, Fang J, Chac?n P, Nogales E
Nature531(7596)604-9(2016 03)
Structural bioinformatics of the general transcription factor TFIID.
Malkowska M, Kokoszynska K, Rychlewski L, Wyrwicz L
Biochimie95(4)680-91(2013 Apr)
Defective transcription initiation causes postnatal growth failure in a mouse model of nucleotide excision repair (NER) progeria.
Kamileri I, Karakasilioti I, Sideri A, Kosteas T, Tatarakis A, Talianidis I, Garinis GA
Proceedings of the National Academy of Sciences of the United States of America109(8)2995-3000(2012 Feb)
TAF6delta orchestrates an apoptotic transcriptome profile and interacts functionally with p53.
Wilhelm E, Kornete M, Targat B, Vigneault-Edwards J, Frontini M, Tora L, Benecke A, Bell B
BMC molecular biology1110(2010 Jan)
Dominant and redundant functions of TFIID involved in the regulation of hepatic genes.
Tatarakis A, Margaritis T, Martinez-Jimenez CP, Kouskouti A, Mohan WS 2nd, Haroniti A, Kafetzopoulos D, Tora L, Talianidis I
Molecular cell31(4)531-43(2008 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Taf6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Taf6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa08126 | |
Clone ID Related Accession (Same CDS sequence) | NM_001044225.1 | |
Accession Version | NM_001044225.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1944bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-23 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transcription initiation factor TFIID subunit 6 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC100108.1. On or before Aug 24, 2006 this sequence version replaced XM_213729.4, XM_001056390.1, XM_001066806.1, XM_001066592.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC100108.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCTGAGG AGAAGAAACT GAAACTCAGC AATACCGTGT TGCCCTCCGA GTCTATGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001037690.1 |
CDS | 97..2040 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001044225.1 |
1 | ATGGCTGAGG AGAAGAAACT GAAACTCAGC AATACCGTGT TGCCCTCCGA GTCTATGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa44693 | |
Clone ID Related Accession (Same CDS sequence) | XM_008769062.2 , XM_008769061.2 , XM_017598294.1 | |
Accession Version | XM_008769062.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2037bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transcription initiation factor TFIID subunit 6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008769062.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAGG AGAAGAAACT GAAACTCAGC AATACCGTGT TGCCCTCCGA GTCTATGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008767284.1 |
CDS | 147..2183 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008769062.2 |
1 | ATGGCTGAGG AGAAGAAACT GAAACTCAGC AATACCGTGT TGCCCTCCGA GTCTATGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa44693 | |
Clone ID Related Accession (Same CDS sequence) | XM_008769062.2 , XM_008769061.2 , XM_017598294.1 | |
Accession Version | XM_008769061.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2037bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transcription initiation factor TFIID subunit 6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008769061.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAGG AGAAGAAACT GAAACTCAGC AATACCGTGT TGCCCTCCGA GTCTATGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008767283.1 |
CDS | 166..2202 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008769061.2 |
1 | ATGGCTGAGG AGAAGAAACT GAAACTCAGC AATACCGTGT TGCCCTCCGA GTCTATGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa44693 | |
Clone ID Related Accession (Same CDS sequence) | XM_008769062.2 , XM_008769061.2 , XM_017598294.1 | |
Accession Version | XM_017598294.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2037bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transcription initiation factor TFIID subunit 6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAGG AGAAGAAACT GAAACTCAGC AATACCGTGT TGCCCTCCGA GTCTATGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017453783.1 |
CDS | 152..2188 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017598294.1 |
1 | ATGGCTGAGG AGAAGAAACT GAAACTCAGC AATACCGTGT TGCCCTCCGA GTCTATGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Structure of promoter-bound TFIID and model of human pre-initiation complex assembly. |
Structural bioinformatics of the general transcription factor TFIID. |
Defective transcription initiation causes postnatal growth failure in a mouse model of nucleotide excision repair (NER) progeria. |
TAF6delta orchestrates an apoptotic transcriptome profile and interacts functionally with p53. |
Dominant and redundant functions of TFIID involved in the regulation of hepatic genes. |