Gene Symbol | Iqcb1 |
Entrez Gene ID | 303915 |
Full Name | IQ motif containing B1 |
Synonyms | NPHP5 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Iqcb1 cDNA ORF clone
Gene Symbol | Iqcb1 |
Entrez Gene ID | 303915 |
Full Name | IQ motif containing B1 |
Synonyms | NPHP5 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006248395.3 | XP_006248457.1 | IQ calmodulin-binding motif-containing protein 1 isoform X1 |
XM_006248396.3 | XP_006248458.1 | IQ calmodulin-binding motif-containing protein 1 isoform X1 |
XM_017597998.1 | XP_017453487.1 | IQ calmodulin-binding motif-containing protein 1 isoform X1 |
NM_001107092.1 | NP_001100562.1 | IQ calmodulin-binding motif-containing protein 1 |
XM_006248397.2 | XP_006248459.1 | IQ calmodulin-binding motif-containing protein 1 isoform X1 |
XM_008768730.1 | XP_008766952.1 | IQ calmodulin-binding motif-containing protein 1 isoform X1 |
Mus musculus (house mouse) | Iqcb1 | NP_796102.2 |
Xenopus tropicalis (tropical clawed frog) | iqcb1 | NP_001072656.1 |
Bos taurus (cattle) | IQCB1 | NP_001039846.1 |
Homo sapiens (human) | IQCB1 | NP_001018864.2 |
Gallus gallus (chicken) | IQCB1 | XP_422091.4 |
Canis lupus familiaris (dog) | IQCB1 | XP_535758.2 |
IQCB1 | XP_002802714.1 | |
Rattus norvegicus (Norway rat) | Iqcb1 | NP_001100562.1 |
Danio rerio (zebrafish) | iqcb1 | NP_001008622.1 |
Danio rerio (zebrafish) | LOC100006122 | NP_001104719.1 |
A high-confidence interaction map identifies SIRT1 as a mediator of acetylation of USP22 and the SAGA coactivator complex.
Armour SM, Bennett EJ, Braun CR, Zhang XY, McMahon SB, Gygi SP, Harper JW, Sinclair DA
Molecular and cellular biology33(8)1487-502(2013 Apr)
Polymorphic variation of RPGRIP1L and IQCB1 as modifiers of X-linked retinitis pigmentosa caused by mutations in RPGR.
Fahim AT, Bowne SJ, Sullivan LS, Webb KD, Williams JT, Wheaton DK, Birch DG, Daiger SP
Advances in experimental medicine and biology723313-20(2012)
Whole-exome sequencing identifies ALMS1, IQCB1, CNGA3, and MYO7A mutations in patients with Leber congenital amaurosis.
Wang X, Wang H, Cao M, Li Z, Chen X, Patenia C, Gore A, Abboud EB, Al-Rajhi AA, Lewis RA, Lupski JR, Mardon G, Zhang K, Muzny D, Gibbs RA, Chen R
Human mutation32(12)1450-9(2011 Dec)
Mapping the NPHP-JBTS-MKS protein network reveals ciliopathy disease genes and pathways.
Sang L, Miller JJ, Corbit KC, Giles RH, Brauer MJ, Otto EA, Baye LM, Wen X, Scales SJ, Kwong M, Huntzicker EG, Sfakianos MK, Sandoval W, Bazan JF, Kulkarni P, Garcia-Gonzalo FR, Seol AD, O'Toole JF, Held S, Reutter HM, Lane WS, Rafiq MA, Noor A, Ansar M, Devi AR, Sheffield VC, Slusarski DC, Vincent JB, Doherty DA, Hildebrandt F, Reiter JF, Jackson PK
Cell145(4)513-28(2011 May)
Allelic heterogeneity and genetic modifier loci contribute to clinical variation in males with X-linked retinitis pigmentosa due to RPGR mutations.
Fahim AT, Bowne SJ, Sullivan LS, Webb KD, Williams JT, Wheaton DK, Birch DG, Daiger SP
PloS one6(8)e23021(2011)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Iqcb1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Iqcb1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa05175 | |
Clone ID Related Accession (Same CDS sequence) | NM_001107092.1 | |
Accession Version | NM_001107092.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1674bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | IQ calmodulin-binding motif-containing protein 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473967.1. On or before Oct 4, 2007 this sequence version replaced XM_221420.4, XM_001062923.1. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGAAGCCAG CGGGTACAGA CCCAAGGATC TTGTCTTTAG CTGCTGAAGT AGCGAAAAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001100562.1 |
CDS | 116..1789 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001107092.1 |
1 | ATGAAGCCAG CGGGTACAGA CCCAAGGATC TTGTCTTTAG CTGCTGAAGT AGCGAAAAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa34310 | |
Clone ID Related Accession (Same CDS sequence) | XM_006248395.3 , XM_006248396.3 , XM_017597998.1 , XM_006248397.2 , XM_008768730.1 | |
Accession Version | XM_006248395.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1797bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | IQ calmodulin-binding motif-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005110.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006248395.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGCCAG CGGGTACAGA CCCAAGGATC TTGTCTTTAG CTGCTGAAGT AGCGAAAAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006248457.1 |
CDS | 183..1979 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006248395.3 |
1 | ATGAAGCCAG CGGGTACAGA CCCAAGGATC TTGTCTTTAG CTGCTGAAGT AGCGAAAAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa34310 | |
Clone ID Related Accession (Same CDS sequence) | XM_006248395.3 , XM_006248396.3 , XM_017597998.1 , XM_006248397.2 , XM_008768730.1 | |
Accession Version | XM_006248396.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1797bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | IQ calmodulin-binding motif-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005110.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006248396.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGCCAG CGGGTACAGA CCCAAGGATC TTGTCTTTAG CTGCTGAAGT AGCGAAAAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006248458.1 |
CDS | 188..1984 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006248396.3 |
1 | ATGAAGCCAG CGGGTACAGA CCCAAGGATC TTGTCTTTAG CTGCTGAAGT AGCGAAAAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa34310 | |
Clone ID Related Accession (Same CDS sequence) | XM_006248395.3 , XM_006248396.3 , XM_017597998.1 , XM_006248397.2 , XM_008768730.1 | |
Accession Version | XM_017597998.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1797bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | IQ calmodulin-binding motif-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005110.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGCCAG CGGGTACAGA CCCAAGGATC TTGTCTTTAG CTGCTGAAGT AGCGAAAAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017453487.1 |
CDS | 2384..4180 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017597998.1 |
1 | ATGAAGCCAG CGGGTACAGA CCCAAGGATC TTGTCTTTAG CTGCTGAAGT AGCGAAAAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa34310 | |
Clone ID Related Accession (Same CDS sequence) | XM_006248395.3 , XM_006248396.3 , XM_017597998.1 , XM_006248397.2 , XM_008768730.1 | |
Accession Version | XM_006248397.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1797bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | IQ calmodulin-binding motif-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005110.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006248397.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGCCAG CGGGTACAGA CCCAAGGATC TTGTCTTTAG CTGCTGAAGT AGCGAAAAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006248459.1 |
CDS | 150..1946 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006248397.2 |
1 | ATGAAGCCAG CGGGTACAGA CCCAAGGATC TTGTCTTTAG CTGCTGAAGT AGCGAAAAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa34310 | |
Clone ID Related Accession (Same CDS sequence) | XM_006248395.3 , XM_006248396.3 , XM_017597998.1 , XM_006248397.2 , XM_008768730.1 | |
Accession Version | XM_008768730.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1797bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | IQ calmodulin-binding motif-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005110.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGCCAG CGGGTACAGA CCCAAGGATC TTGTCTTTAG CTGCTGAAGT AGCGAAAAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008766952.1 |
CDS | 155..1951 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008768730.1 |
1 | ATGAAGCCAG CGGGTACAGA CCCAAGGATC TTGTCTTTAG CTGCTGAAGT AGCGAAAAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A high-confidence interaction map identifies SIRT1 as a mediator of acetylation of USP22 and the SAGA coactivator complex. |
Polymorphic variation of RPGRIP1L and IQCB1 as modifiers of X-linked retinitis pigmentosa caused by mutations in RPGR. |
Whole-exome sequencing identifies ALMS1, IQCB1, CNGA3, and MYO7A mutations in patients with Leber congenital amaurosis. |
Mapping the NPHP-JBTS-MKS protein network reveals ciliopathy disease genes and pathways. |
Allelic heterogeneity and genetic modifier loci contribute to clinical variation in males with X-linked retinitis pigmentosa due to RPGR mutations. |