Gene Symbol | Farp1 |
Entrez Gene ID | 306183 |
Full Name | FERM, ARH/RhoGEF and pleckstrin domain protein 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Farp1 cDNA ORF clone
Gene Symbol | Farp1 |
Entrez Gene ID | 306183 |
Full Name | FERM, ARH/RhoGEF and pleckstrin domain protein 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006252475.3 | XP_006252537.1 | FERM, RhoGEF and pleckstrin domain-containing protein 1 isoform X2 |
XM_006252472.3 | XP_006252534.1 | FERM, RhoGEF and pleckstrin domain-containing protein 1 isoform X1 |
XM_006252473.3 | XP_006252535.1 | FERM, RhoGEF and pleckstrin domain-containing protein 1 isoform X1 |
XM_017599720.1 | XP_017455209.1 | FERM, RhoGEF and pleckstrin domain-containing protein 1 isoform X1 |
NM_001107287.1 | NP_001100757.1 | FERM, ARHGEF and pleckstrin domain-containing protein 1 |
Pan troglodytes (chimpanzee) | FARP1 | XP_001142635.1 |
Bos taurus (cattle) | FARP1 | NP_001179641.1 |
Homo sapiens (human) | FARP1 | NP_001273768.1 |
Rattus norvegicus (Norway rat) | Farp1 | NP_001100757.1 |
Danio rerio (zebrafish) | LOC100329707 | XP_002660376.3 |
Canis lupus familiaris (dog) | FARP1 | XP_005634088.1 |
Mus musculus (house mouse) | Farp1 | NP_598843.3 |
FARP1 | XP_001089334.2 | |
Gallus gallus (chicken) | FARP1 | NP_001238993.1 |
Xenopus tropicalis (tropical clawed frog) | farp1 | XP_002935691.2 |
Activity-dependent regulation of dendritic complexity by semaphorin 3A through Farp1.
Cheadle L, Biederer T
The Journal of neuroscience : the official journal of the Society for Neuroscience34(23)7999-8009(2014 Jun)
The novel synaptogenic protein Farp1 links postsynaptic cytoskeletal dynamics and transsynaptic organization.
Cheadle L, Biederer T
The Journal of cell biology199(6)985-1001(2012 Dec)
Docking motif-guided mapping of the interactome of protein phosphatase-1.
Hendrickx A, Beullens M, Ceulemans H, Den Abt T, Van Eynde A, Nicolaescu E, Lesage B, Bollen M
Chemistry & biology16(4)365-71(2009 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
This study support that Farp1 signaling is necessary for the high extent of arborization of maturing dendrites.
Title: Activity-dependent regulation of dendritic complexity by semaphorin 3A through Farp1.
The following Farp1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Farp1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa03233 | |
Clone ID Related Accession (Same CDS sequence) | XM_006252472.3 , XM_006252473.3 , XM_017599720.1 , NM_001107287.1 | |
Accession Version | NM_001107287.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3150bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-17 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | FERM, ARHGEF and pleckstrin domain-containing protein 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473951.1. On or before Oct 4, 2007 this sequence version replaced XM_224535.4, XM_001078859.1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGAGAAA TAGAGCAGAA GCCCACCCCA GCATCACGTC TGGGGGCCCC AGAGAACTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001100757.1 |
CDS | 23..3172 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001107287.1 |
1 | ATGGGAGAAA TAGAGCAGAA GCCCACCCCA GCATCACGTC TGGGGGCCCC AGAGAACTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa03233 | |
Clone ID Related Accession (Same CDS sequence) | XM_006252472.3 , XM_006252473.3 , XM_017599720.1 , NM_001107287.1 | |
Accession Version | XM_006252472.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3150bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | FERM, RhoGEF and pleckstrin domain-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005114.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006252472.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGAAA TAGAGCAGAA GCCCACCCCA GCATCACGTC TGGGGGCCCC AGAGAACTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006252534.1 |
CDS | 576..3725 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006252472.3 |
1 | ATGGGAGAAA TAGAGCAGAA GCCCACCCCA GCATCACGTC TGGGGGCCCC AGAGAACTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa03233 | |
Clone ID Related Accession (Same CDS sequence) | XM_006252472.3 , XM_006252473.3 , XM_017599720.1 , NM_001107287.1 | |
Accession Version | XM_006252473.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3150bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | FERM, RhoGEF and pleckstrin domain-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005114.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006252473.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGAAA TAGAGCAGAA GCCCACCCCA GCATCACGTC TGGGGGCCCC AGAGAACTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006252535.1 |
CDS | 638..3787 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006252473.3 |
1 | ATGGGAGAAA TAGAGCAGAA GCCCACCCCA GCATCACGTC TGGGGGCCCC AGAGAACTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa03233 | |
Clone ID Related Accession (Same CDS sequence) | XM_006252472.3 , XM_006252473.3 , XM_017599720.1 , NM_001107287.1 | |
Accession Version | XM_017599720.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3150bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | FERM, RhoGEF and pleckstrin domain-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005114.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGAAA TAGAGCAGAA GCCCACCCCA GCATCACGTC TGGGGGCCCC AGAGAACTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017455209.1 |
CDS | 1090..4239 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017599720.1 |
1 | ATGGGAGAAA TAGAGCAGAA GCCCACCCCA GCATCACGTC TGGGGGCCCC AGAGAACTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa36941 | |
Clone ID Related Accession (Same CDS sequence) | XM_006252475.3 | |
Accession Version | XM_006252475.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3120bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | FERM, RhoGEF and pleckstrin domain-containing protein 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005114.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006252475.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGAAA TAGAGCAGAA GCCCACCCCA GCATCACGTC TGGGGGCCCC AGAGAACTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006252537.1 |
CDS | 576..3695 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006252475.3 |
1 | ATGGGAGAAA TAGAGCAGAA GCCCACCCCA GCATCACGTC TGGGGGCCCC AGAGAACTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Activity-dependent regulation of dendritic complexity by semaphorin 3A through Farp1. |
The novel synaptogenic protein Farp1 links postsynaptic cytoskeletal dynamics and transsynaptic organization. |
Docking motif-guided mapping of the interactome of protein phosphatase-1. |