Gene Symbol | Runx1t1 |
Entrez Gene ID | 362489 |
Full Name | RUNX1 translocation partner 1 |
Synonyms | Cbfa2t1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Runx1t1 cDNA ORF clone
Gene Symbol | Runx1t1 |
Entrez Gene ID | 362489 |
Full Name | RUNX1 translocation partner 1 |
Synonyms | Cbfa2t1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_008763550.2 | XP_008761772.1 | protein CBFA2T1 isoform X1 |
NM_001108657.1 | NP_001102127.1 | protein CBFA2T1 |
XM_008763548.2 | XP_008761770.2 | protein CBFA2T1 isoform X4 |
XM_006237903.3 | XP_006237965.1 | protein CBFA2T1 isoform X2 |
XM_008763549.2 | XP_008761771.1 | protein CBFA2T1 isoform X1 |
XM_006237904.3 | XP_006237966.1 | protein CBFA2T1 isoform X3 |
XM_006237901.3 | XP_006237963.1 | protein CBFA2T1 isoform X1 |
XM_017593469.1 | XP_017448958.1 | protein CBFA2T1 isoform X1 |
Xenopus tropicalis (tropical clawed frog) | runx1t1 | XP_002934461.1 |
Gallus gallus (chicken) | RUNX1T1 | NP_990075.1 |
Homo sapiens (human) | RUNX1T1 | NP_001185608.1 |
Pan troglodytes (chimpanzee) | RUNX1T1 | XP_003311880.1 |
Canis lupus familiaris (dog) | RUNX1T1 | XP_544173.3 |
Mus musculus (house mouse) | Runx1t1 | NP_001104497.1 |
Danio rerio (zebrafish) | runx1t1 | NP_001070244.2 |
RUNX1T1 | XP_002805480.1 | |
Rattus norvegicus (Norway rat) | Runx1t1 | NP_001102127.1 |
Evolving New Skeletal Traits by cis-Regulatory Changes in Bone Morphogenetic Proteins.
Indjeian VB, Kingman GA, Jones FC, Guenther CA, Grimwood J, Schmutz J, Myers RM, Kingsley DM
Cell164(1-2)45-56(2016 Jan)
Runx1t1 regulates the neuronal differentiation of radial glial cells from the rat hippocampus.
Linqing Z, Guohua J, Haoming L, Xuelei T, Jianbing Q, Meiling T
Stem cells translational medicine4(1)110-6(2015 Jan)
Kaiso directs the transcriptional corepressor MTG16 to the Kaiso binding site in target promoters.
Barrett CW, Smith JJ, Lu LC, Markham N, Stengel KR, Short SP, Zhang B, Hunt AA, Fingleton BM, Carnahan RH, Engel ME, Chen X, Beauchamp RD, Wilson KT, Hiebert SW, Reynolds AB, Williams CS
PloS one7(12)e51205(2012)
ETO/MTG8 is an inhibitor of C/EBPbeta activity and a regulator of early adipogenesis.
Rochford JJ, Semple RK, Laudes M, Boyle KB, Christodoulides C, Mulligan C, Lelliott CJ, Schinner S, Hadaschik D, Mahadevan M, Sethi JK, Vidal-Puig A, O'Rahilly S
Molecular and cellular biology24(22)9863-72(2004 Nov)
Atrophin-1, the dentato-rubral and pallido-luysian atrophy gene product, interacts with ETO/MTG8 in the nuclear matrix and represses transcription.
Wood JD, Nucifora FC Jr, Duan K, Zhang C, Wang J, Kim Y, Schilling G, Sacchi N, Liu JM, Ross CA
The Journal of cell biology150(5)939-48(2000 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
We have concluded that Runx1t1 could be involved in the process through which radial glial cells differentiate into neurons
Title: Runx1t1 regulates the neuronal differentiation of radial glial cells from the rat hippocampus.
The following Runx1t1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Runx1t1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa13918 | |
Clone ID Related Accession (Same CDS sequence) | NM_001108657.1 | |
Accession Version | NM_001108657.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1734bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-12 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein CBFA2T1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473962.1. On or before Oct 4, 2007 this sequence version replaced XM_001053893.1, XM_342808.3. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCCTGATC GTACCGAGAA GCACTCCACG ATGCCAGACT CACCTGTGGA TGTGAAGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001102127.1 |
CDS | 354..2087 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001108657.1 |
1 | ATGCCTGATC GTACCGAGAA GCACTCCACG ATGCCAGACT CACCTGTGGA TGTGAAGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa28051 | |
Clone ID Related Accession (Same CDS sequence) | XM_008763550.2 , XM_008763549.2 , XM_006237901.3 , XM_017593469.1 | |
Accession Version | XM_008763550.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1815bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein CBFA2T1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008763550.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATATCTA TCAAAAGAAA CACTTGGAGA GCACTGAGTG TAGTGATAGG TGACTGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008761772.1 |
CDS | 161..1975 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008763550.2 |
1 | ATGATATCTA TCAAAAGAAA CACTTGGAGA GCACTGAGTG TAGTGATAGG TGACTGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa28051 | |
Clone ID Related Accession (Same CDS sequence) | XM_008763550.2 , XM_008763549.2 , XM_006237901.3 , XM_017593469.1 | |
Accession Version | XM_008763549.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1815bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein CBFA2T1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008763549.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATATCTA TCAAAAGAAA CACTTGGAGA GCACTGAGTG TAGTGATAGG TGACTGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008761771.1 |
CDS | 5567..7381 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008763549.2 |
1 | ATGATATCTA TCAAAAGAAA CACTTGGAGA GCACTGAGTG TAGTGATAGG TGACTGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa28051 | |
Clone ID Related Accession (Same CDS sequence) | XM_008763550.2 , XM_008763549.2 , XM_006237901.3 , XM_017593469.1 | |
Accession Version | XM_006237901.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1815bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein CBFA2T1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006237901.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATATCTA TCAAAAGAAA CACTTGGAGA GCACTGAGTG TAGTGATAGG TGACTGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006237963.1 |
CDS | 371..2185 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006237901.3 |
1 | ATGATATCTA TCAAAAGAAA CACTTGGAGA GCACTGAGTG TAGTGATAGG TGACTGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa28051 | |
Clone ID Related Accession (Same CDS sequence) | XM_008763550.2 , XM_008763549.2 , XM_006237901.3 , XM_017593469.1 | |
Accession Version | XM_017593469.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1815bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein CBFA2T1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATATCTA TCAAAAGAAA CACTTGGAGA GCACTGAGTG TAGTGATAGG TGACTGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017448958.1 |
CDS | 168..1982 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017593469.1 |
1 | ATGATATCTA TCAAAAGAAA CACTTGGAGA GCACTGAGTG TAGTGATAGG TGACTGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa28052 | |
Clone ID Related Accession (Same CDS sequence) | XM_006237903.3 | |
Accession Version | XM_006237903.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1791bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein CBFA2T1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006237903.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATACAA AGCGGCGGTG TGGGGGCCGC GCGGCCGGCC GCCTCGCGCG CTCGCCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006237965.1 |
CDS | 6502..8292 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006237903.3 |
1 | ATGAATACAA AGCGGCGGTG TGGGGGCCGC GCGGCCGGCC GCCTCGCGCG CTCGCCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa28053 | |
Clone ID Related Accession (Same CDS sequence) | XM_006237904.3 | |
Accession Version | XM_006237904.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1755bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein CBFA2T1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006237904.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGGAC TCTTCAGCCT TGTGCAGTAT CGTACCGAGA AGCACTCCAC GATGCCAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006237966.1 |
CDS | 261..2015 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006237904.3 |
1 | ATGGTGGGAC TCTTCAGCCT TGTGCAGTAT CGTACCGAGA AGCACTCCAC GATGCCAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa61288 | |
Clone ID Related Accession (Same CDS sequence) | XM_008763548.2 | |
Accession Version | XM_008763548.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1704bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein CBFA2T1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008763548.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCAGACT CACCTGTGGA TGTGAAGACG CAGTCTAGGC TGACTCCCCC AGCAATGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008761770.2 |
CDS | 266..1969 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008763548.2 |
1 | ATGCCAGACT CACCTGTGGA TGTGAAGACG CAGTCTAGGC TGACTCCCCC AGCAATGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evolving New Skeletal Traits by cis-Regulatory Changes in Bone Morphogenetic Proteins. |
Runx1t1 regulates the neuronal differentiation of radial glial cells from the rat hippocampus. |
Kaiso directs the transcriptional corepressor MTG16 to the Kaiso binding site in target promoters. |
ETO/MTG8 is an inhibitor of C/EBPbeta activity and a regulator of early adipogenesis. |
Atrophin-1, the dentato-rubral and pallido-luysian atrophy gene product, interacts with ETO/MTG8 in the nuclear matrix and represses transcription. |