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Hoxa13 cDNA ORF clone, Rattus norvegicus(Norway rat)

Summary

Gene Symbol Hoxa13
Entrez Gene ID 500129
Full Name homeo box A13
Synonyms RGD1562483
General protein information
Preferred Names

homeo box A13

Names

homeo box A13
homeobox A13
homeobox protein Hox-A13-like
Gene Type protein-coding
Organism Rattus norvegicus(Norway rat)
Genome

4

4q24

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001271355.1 NP_001258284.1 homeo box A13

Pathways from BioSystems


Homologies


Mus musculus (house mouse) Hoxa13 NP_032290.1
Rattus norvegicus (Norway rat) LOC102550333 XP_006257773.1
Rattus norvegicus (Norway rat) Hoxa13 NP_001258284.1
Gallus gallus (chicken) HOXA13 NP_989470.1
Pan troglodytes (chimpanzee) HOXA13 XP_527701.3
Canis lupus familiaris (dog) HOXA13 XP_539492.4
Bos taurus (cattle) HOXA13 XP_002686896.2
Gallus gallus (chicken) LOC100859244 XP_003640766.2
Homo sapiens (human) HOXA13 NP_000513.2
HOXA13 XP_002803404.1
Danio rerio (zebrafish) hoxa13b NP_571269.1
Xenopus tropicalis (tropical clawed frog) hoxa13 XP_002933431.1
Gallus gallus (chicken) LOC100859005 XP_003640757.1

Gene Ontology


Bibliography

Related articles in PubMed

Evolution of Hoxa11 regulation in vertebrates is linked to the pentadactyl state.
Kherdjemil Y, Lalonde RL, Sheth R, Dumouchel A, de Martino G, Pineault KM, Wellik DM, Stadler HS, Akimenko MA, Kmita M
Nature539(7627)89-92(2016 11)

Maternal exposure to di-n-butyl phthalate (DBP) induces combined anorectal and urogenital malformations in male rat offspring.
Zhu YP, Li EH, Sun WL, Xu DL, Liu ZH, Zhao W, Wood K, Xia SJ, Jiang JT
Reproductive toxicology (Elmsford, N.Y.)61169-76(2016 06)

DNA-binding specificities of human transcription factors.
Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J
Cell152(1-2)327-39(2013 Jan)

Structural basis for sequence specific DNA binding and protein dimerization of HOXA13.
Zhang Y, Larsen CA, Stadler HS, Ames JB
PloS one6(8)e23069(2011)

Sall genes regulate region-specific morphogenesis in the mouse limb by modulating Hox activities.
Kawakami Y, Uchiyama Y, Rodriguez Esteban C, Inenaga T, Koyano-Nakagawa N, Kawakami H, Marti M, Kmita M, Monaghan-Nichols P, Nishinakamura R, Izpisua Belmonte JC
Development (Cambridge, England)136(4)585-94(2009 Feb)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Hoxa13 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Hoxa13 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa11067 NM_001271355.1
Latest version!		 Rattus norvegicus homeo box A13 (Hoxa13), mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $223.30
$319.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ORa11067
Clone ID Related Accession (Same CDS sequence) NM_001271355.1
Accession Version NM_001271355.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1161bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-10-02
Organism Rattus norvegicus(Norway rat)
Product homeo box A13
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC122669.6. On or before Sep 19, 2012 this sequence version replaced XM_003749759.1, XM_003749760.1, XM_575481.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA2689600, SAMN02642622 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGACAGCCT CCGTGCTCCT CCACCCCCGC TGGATCGAGC CCACCGTCAT GTTTCTCTAC 
GACAACGGCG GCGGCCTGGT GGCCGACGAG CTCAACAAGA ACATGGAAGG GGCGGCGGCG 
GCGGCAGCGG CGGCGGCAGC GGCAGCGGCG GCGGGAGCTG GGGGCGGGGG CTTCCCCCAC 
CCGGCTGCGG CGGCCGCGGG GGGCAACTTC TCGGTGGCCG CAGCGGCTGC CGCCGCCGCC 
GCCGCCGCGG CCAACCAGTG CCGCAACCTG ATGGCGCATC CCGCACCACT GGCGCCGGGC 
GCCGCGGCCG CGTACAGCAG CGCCCCGGGG GAGGCGCCCC CGACCGCCGC CGCCGCCGCC 
GCTGCCGCTG CTGCCGCCGC CGCCGCCGCG GCTGCCGCGT CGTCGTCGGG AGGGCCCGGA 
CCGGCGGGGC CCGCGGGTGC CGAGGCCGCC AAGCAGTGTA GTCCCTGCTC GGCGGCGGCA 
CAAAGCTCGT CGGGTCCCGC GGCGCTGCCC TATGGCTACT TCGGCAGCGG CTACTACCCG 
TGCGCCCGCA TGGGCCCGCA CCCCAACGCC ATCAAGTCCT GCGCGCAGCC TGCCTCGGCT 
GCGGCCGCCT TCGCCGACAA GTACATGGAC ACCGCCGGCC CCGCGGCCGA GGAGTTCAGC 
TCCCGCGCCA AGGAGTTTGC CTTCTACCAC CAGGGCTACG CAGCCGGGCC TTACCACCAC 
CACCAGCCCG TGCCCGGCTA TCTGGATATG CCAGTGGTTC CGGGGCTCGG GGGTCCTGGC 
GAGTCGCGCC ACGAGCCTCT GGGGCTTCCT ATGGAAAGCT ATCAGCCCTG GGCTCTGCCC 
AACGGCTGGA ACGGCCAAAT GTACTGCCCC AAAGAGCAGA CGCAGCCTCC CCACCTCTGG 
AAGTCCACTC TGCCCGACGT CGTCTCCCAT CCTTCAGACG CCAGCTCCTA TAGGAGGGGG 
AGAAAGAAGC GGGTGCCTTA CACTAAGGTG CAGTTGAAAG AACTCGAACG GGAATACGCT 
ACGAACAAAT TCATTACCAA GGACAAACGG AGGAGGATAT CAGCCACAAC GAACCTCTCT 
GAGAGGCAGG TCACAATCTG GTTCCAGAAC AGGAGGGTCA AAGAGAAAAA AGTCATCAAT 
AAACTCAAGA CCACGAGTTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001258284.1
CDS24..1184
Translation

Target ORF information:

RefSeq Version NM_001271355.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus homeo box A13 (Hoxa13), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001271355.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGACAGCCT CCGTGCTCCT CCACCCCCGC TGGATCGAGC CCACCGTCAT GTTTCTCTAC 
GACAACGGCG GCGGCCTGGT GGCCGACGAG CTCAACAAGA ACATGGAAGG GGCGGCGGCG 
GCGGCAGCGG CGGCGGCAGC GGCAGCGGCG GCGGGAGCTG GGGGCGGGGG CTTCCCCCAC 
CCGGCTGCGG CGGCCGCGGG GGGCAACTTC TCGGTGGCCG CAGCGGCTGC CGCCGCCGCC 
GCCGCCGCGG CCAACCAGTG CCGCAACCTG ATGGCGCATC CCGCACCACT GGCGCCGGGC 
GCCGCGGCCG CGTACAGCAG CGCCCCGGGG GAGGCGCCCC CGACCGCCGC CGCCGCCGCC 
GCTGCCGCTG CTGCCGCCGC CGCCGCCGCG GCTGCCGCGT CGTCGTCGGG AGGGCCCGGA 
CCGGCGGGGC CCGCGGGTGC CGAGGCCGCC AAGCAGTGTA GTCCCTGCTC GGCGGCGGCA 
CAAAGCTCGT CGGGTCCCGC GGCGCTGCCC TATGGCTACT TCGGCAGCGG CTACTACCCG 
TGCGCCCGCA TGGGCCCGCA CCCCAACGCC ATCAAGTCCT GCGCGCAGCC TGCCTCGGCT 
GCGGCCGCCT TCGCCGACAA GTACATGGAC ACCGCCGGCC CCGCGGCCGA GGAGTTCAGC 
TCCCGCGCCA AGGAGTTTGC CTTCTACCAC CAGGGCTACG CAGCCGGGCC TTACCACCAC 
CACCAGCCCG TGCCCGGCTA TCTGGATATG CCAGTGGTTC CGGGGCTCGG GGGTCCTGGC 
GAGTCGCGCC ACGAGCCTCT GGGGCTTCCT ATGGAAAGCT ATCAGCCCTG GGCTCTGCCC 
AACGGCTGGA ACGGCCAAAT GTACTGCCCC AAAGAGCAGA CGCAGCCTCC CCACCTCTGG 
AAGTCCACTC TGCCCGACGT CGTCTCCCAT CCTTCAGACG CCAGCTCCTA TAGGAGGGGG 
AGAAAGAAGC GGGTGCCTTA CACTAAGGTG CAGTTGAAAG AACTCGAACG GGAATACGCT 
ACGAACAAAT TCATTACCAA GGACAAACGG AGGAGGATAT CAGCCACAAC GAACCTCTCT 
GAGAGGCAGG TCACAATCTG GTTCCAGAAC AGGAGGGTCA AAGAGAAAAA AGTCATCAAT 
AAACTCAAGA CCACGAGTTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Evolution of Hoxa11 regulation in vertebrates is linked to the pentadactyl state.
Nature539(7627)89-92(2016 11)
Kherdjemil Y,Lalonde RL,Sheth R,Dumouchel A,de Martino G,Pineault KM,Wellik DM,Stadler HS,Akimenko MA,Kmita M


book

Maternal exposure to di-n-butyl phthalate (DBP) induces combined anorectal and urogenital malformations in male rat offspring.
Reproductive toxicology (Elmsford, N.Y.)61169-76(2016 06)
Zhu YP,Li EH,Sun WL,Xu DL,Liu ZH,Zhao W,Wood K,Xia SJ,Jiang JT


book

DNA-binding specificities of human transcription factors.
Cell152(1-2)327-39(2013 Jan)
Jolma A,Yan J,Whitington T,Toivonen J,Nitta KR,Rastas P,Morgunova E,Enge M,Taipale M,Wei G,Palin K,Vaquerizas JM,Vincentelli R,Luscombe NM,Hughes TR,Lemaire P,Ukkonen E,Kivioja T,Taipale J


book

Structural basis for sequence specific DNA binding and protein dimerization of HOXA13.
PloS one6(8)e23069(2011)
Zhang Y,Larsen CA,Stadler HS,Ames JB


book

Sall genes regulate region-specific morphogenesis in the mouse limb by modulating Hox activities.
Development (Cambridge, England)136(4)585-94(2009 Feb)
Kawakami Y,Uchiyama Y,Rodriguez Esteban C,Inenaga T,Koyano-Nakagawa N,Kawakami H,Marti M,Kmita M,Monaghan-Nichols P,Nishinakamura R,Izpisua Belmonte JC