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hoxa13b cDNA ORF clone, Danio rerio(zebrafish)

Summary

Gene Symbol hoxa13b
Entrez Gene ID 30438
Full Name homeobox A13b
Synonyms HOXA13,Hoxa-13,wu:fa66g07,zgc:110514
General protein information
Preferred Names

homeobox A13b

Names

homeobox protein Hox-A13b
homeo box A13b
homeobox gene A-13b
hox-A13
Gene Type protein-coding
Organism Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_131194.2 NP_571269.2 homeobox protein Hox-A13b

Pathways from BioSystems


Homologies


Mus musculus (house mouse) Hoxa13 NP_032290.1
Rattus norvegicus (Norway rat) LOC102550333 XP_006257773.1
Rattus norvegicus (Norway rat) Hoxa13 NP_001258284.1
Gallus gallus (chicken) HOXA13 NP_989470.1
Pan troglodytes (chimpanzee) HOXA13 XP_527701.3
Canis lupus familiaris (dog) HOXA13 XP_539492.4
Bos taurus (cattle) HOXA13 XP_002686896.2
Gallus gallus (chicken) LOC100859244 XP_003640766.2
Homo sapiens (human) HOXA13 NP_000513.2
HOXA13 XP_002803404.1
Danio rerio (zebrafish) hoxa13b NP_571269.1
Xenopus tropicalis (tropical clawed frog) hoxa13 XP_002933431.1
Gallus gallus (chicken) LOC100859005 XP_003640757.1

Gene Ontology


Bibliography

Related articles in PubMed

Evolution of Hoxa11 regulation in vertebrates is linked to the pentadactyl state.
Kherdjemil Y, Lalonde RL, Sheth R, Dumouchel A, de Martino G, Pineault KM, Wellik DM, Stadler HS, Akimenko MA, Kmita M
Nature539(7627)89-92(2016 11)

Digits and fin rays share common developmental histories.
Nakamura T, Gehrke AR, Lemberg J, Szymaszek J, Shubin NH
Nature537(7619)225-228(2016 09)

Tbx16 regulates hox gene activation in mesodermal progenitor cells.
Payumo AY, McQuade LE, Walker WJ, Yamazoe S, Chen JK
Nature chemical biology12(9)694-701(2016 09)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following hoxa13b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the hoxa13b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa21325 NM_131194.2
Latest version!		 Danio rerio homeobox A13b (hoxa13b), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00

ORF Online Only Promotion

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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa21325
Clone ID Related Accession (Same CDS sequence) NM_131194.2
Accession Version NM_131194.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 870bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-04-06
Organism Danio rerio(zebrafish)
Product homeobox protein Hox-A13b
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC090761.1. On or before Jun 18, 2015 this sequence version replaced XM_005157955.2, NM_131194.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC090761.1, EV762052.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## 

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481
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841
ATGACAGCGT CTTTACTCCT CCATTCCCGC TGGATTGACC CGGTGATGTT TCTCTATGAC 
AACGGTTTGG ATGATATGAG CAAAAACATG GAAGGATTTG TGGGAGGCAA TTTTGCTGCG 
AACCAGTGTA GGAATCTCAT TGCCCATCCG TCTACTTTGG CTCCGAGTAC AACCTACACA 
TCGAGTGAGG TGCCAGTGTC GGGCATGGGA GAGCCTGTCA AACAATGCAG CCCGTGTTCG 
GCCGTGCAAA ATACCCCAAG TGCTTCTTTG CCCTATGGAT ATTTTGGCGG CAGCTATTAC 
CCGTGTAGGA TGCCCAAGTC CTGCACGCAA CCCACCACAT ATGGAGAAAA ATACATGGAC 
ACTTCTGTTT CTGGAGAGGA GTTTCCTTCT CGAGCAAAGG AATTTGCTTT CTACCAGGGC 
TACTCGTCTG GCCCTTACCA GCCTGTACCA AGTTACCTTG ACGTGCCAGT TGTACCTGCG 
CTGAGCGCTC CTTCGGAACC GAGACATGAA TCTCTACTGC CTGTGGAAAC GTACCAGCCG 
TGGGCAATCA CTAACGGGTG GAGCAGTCCA GTGTACTGCC CGAAAGATCA AACACAGTCA 
AGTACCTTGT GGAAATCGTC TATCCAAGAT ACCGTGTCAG GTACCGATGG AGCCTCAGTA 
CGTCGAGGGA GAAAGAAGCG GGTTCCCTAC ACCAAGGTTC AATTGAAGGA ACTAGAACGA 
GAATATGCCA CAAATAAGTT CATCACAAAG GACAAACGAA GAAGGATATC TGCTCACACA 
AACCTGACCG AGCGACAAGT GACCATCTGG TTTCAGAACA GGCGGGTAAA AGAAAAGAAA 
GTGGTCAACA AGTACAAGGG CATCAGTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_571269.2
CDS50..919
Translation

Target ORF information:

RefSeq Version NM_131194.2
Organism Danio rerio(zebrafish)
Definition Danio rerio homeobox A13b (hoxa13b), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_131194.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGACAGCGT CTTTACTCCT CCATTCCCGC TGGATTGACC CGGTGATGTT TCTCTATGAC 
AACGGTTTGG ATGATATGAG CAAAAACATG GAAGGATTTG TGGGAGGCAA TTTTGCTGCG 
AACCAGTGTA GGAATCTCAT TGCCCATCCG TCTACTTTGG CTCCGAGTAC AACCTACACA 
TCGAGTGAGG TGCCAGTGTC GGGCATGGGA GAGCCTGTCA AACAATGCAG CCCGTGTTCG 
GCCGTGCAAA ATACCCCAAG TGCTTCTTTG CCCTATGGAT ATTTTGGCGG CAGCTATTAC 
CCGTGTAGGA TGCCCAAGTC CTGCACGCAA CCCACCACAT ATGGAGAAAA ATACATGGAC 
ACTTCTGTTT CTGGAGAGGA GTTTCCTTCT CGAGCAAAGG AATTTGCTTT CTACCAGGGC 
TACTCGTCTG GCCCTTACCA GCCTGTACCA AGTTACCTTG ACGTGCCAGT TGTACCTGCG 
CTGAGCGCTC CTTCGGAACC GAGACATGAA TCTCTACTGC CTGTGGAAAC GTACCAGCCG 
TGGGCAATCA CTAACGGGTG GAGCAGTCCA GTGTACTGCC CGAAAGATCA AACACAGTCA 
AGTACCTTGT GGAAATCGTC TATCCAAGAT ACCGTGTCAG GTACCGATGG AGCCTCAGTA 
CGTCGAGGGA GAAAGAAGCG GGTTCCCTAC ACCAAGGTTC AATTGAAGGA ACTAGAACGA 
GAATATGCCA CAAATAAGTT CATCACAAAG GACAAACGAA GAAGGATATC TGCTCACACA 
AACCTGACCG AGCGACAAGT GACCATCTGG TTTCAGAACA GGCGGGTAAA AGAAAAGAAA 
GTGGTCAACA AGTACAAGGG CATCAGTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Evolution of Hoxa11 regulation in vertebrates is linked to the pentadactyl state.
Nature539(7627)89-92(2016 11)
Kherdjemil Y,Lalonde RL,Sheth R,Dumouchel A,de Martino G,Pineault KM,Wellik DM,Stadler HS,Akimenko MA,Kmita M


book

Digits and fin rays share common developmental histories.
Nature537(7619)225-228(2016 09)
Nakamura T,Gehrke AR,Lemberg J,Szymaszek J,Shubin NH


book

Tbx16 regulates hox gene activation in mesodermal progenitor cells.
Nature chemical biology12(9)694-701(2016 09)
Payumo AY,McQuade LE,Walker WJ,Yamazoe S,Chen JK