ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPS_41403 cDNA ORF clone

THAPS_41403 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPS_41403 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPS_41403 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

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OTf09050 XM_002295905.1
Latest version!		 Thalassiosira pseudonana CCMP1335 ABC transporter mRNA. pcDNA3.1-C-(k)DYK or customized vector 20 $629.30
$899.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPS_41403 ( XM_002295905.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002295941.1 Thalassiosira pseudonana CCMP1335 ABC transporter mRNA.
    Price & Availability↑
    CloneID OTf09050
    Clone ID Related Accession (Same CDS sequence) XM_002295905.1
    Accession Version XM_002295905.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3315bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-15
    Organism Thalassiosira pseudonana CCMP1335
    Product ABC transporter
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012070). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    ATGACAAGTA CCGGACAGGT GGTCAACATG ATGAGCAATG ATACTTCGCA ATTACAACGC 
    TTCCTCCAGT TCTTTGGGTT TACAATCGTG GCACCCGTTC AGATTGTCAT TGCGTTAGTG 
    TTGATTTATC GACAGGTTGG GAATGCCACG TGGGTGGGAG TGGGCTTCAT GTTCTTGTTA 
    ATCCCAGTGA ATGGTGTGGT GTTTTCGAAT ATTTCCAAGA TGAGGCGTAA GGTGCTCAAG 
    TATTCGGATG CACGTGTCAA GATGGTCAAT GAGATTTTGG GTGGGATTCG TATCATCAAG 
    TTCTACGGGT GGGAGAAGGC GTTTGGAAAG GAGGTGGACC GACTTCGTAC CAAGGAATTG 
    CGAGCGTTGA CTGTACTAGC TTACACGAGT GCTATTGGAT TCTCGTTGAT CATGCTGAGT 
    GCTCCGATTA TCAATCCAAT CTTGGTCTTT TTGGCGTATA TCAATACACA GAGTTCGAGT 
    TTGGATGCGG CCACGGCTTT TACGACAATT GCGTTGTTCA ATATCTTGAG GTTTCCGTTT 
    GCATTCTTAC CAATGGGGTT CCTTCAATTC ATTCAGAGTA GGATTGCATT GAGGCGTCTT 
    TCGCGATATT TGGAGTTATC GGAGTTGTCG AGCTATGTTG TGAATGGTAT GCCGCCGGAG 
    CTAGGGGATG ATGCAGATGC TCCTACGATG GATGATGATA CAAAAGAGAG TCGAATTGCA 
    CTCAAAAACA TTGCATGCTC TATTGAGAGA GGTTCGTTGG TGGCAGTTGT TGGAACTGTC 
    GGTAGTGGCA AGAGTTCGTT GCTGTCCGCC ATTCTTGGAG AGATGGAGCC TATCGATGGG 
    AGCAAAGTGT TCATGCCGAC GAAGGAGGGA GAGGTCTACC ATGACAACCT TGTGAGTTAC 
    TGCTCTCAAT CACCTTGGGT TGTGAATGAT ACTTTGAGAG GCAACATTCT CTTTGGACGG 
    CCTTATGATG ACGACAGATA CAATGAAGTA GTTGCAGCCT GTGCGTTGGT TGATGATCTT 
    GTGGTGCTGC CGGCAGGAGA CATGACTGAA ATTGGTGAAC GCGGTATCAA CTTGAGCGGA 
    GGGCAAAAGG CACGTGTTGC ACTGGCACGT TCCATGTACT CGCAAGAGAC TCAATTGATG 
    CTTTTGGACG ACCCCTTATC AGCGGTGGAT GCTCATGTTG GAGAGCATTT GTTCCGCGAG 
    GCCATTACTG GAAGTATTAG CAAGGGTACC ACAAGAGTGC TTGTTACCCA TCACGTGCAT 
    TTCCTCCCAC GTTGTGACTC GATTCTTGTA CTGGATAAGG GCATGATCAT TCACAGTGGA 
    TCGTATCACG AGCTAGTAGC AAGAGGAGTT GACTTTGCCG GTGCAATTGA AGTTGAACAG 
    AAGGAGGTAG CAGCTGAAGG CGAGAAAGAC GCGGAAGAGA GCAAGCCCGA CGCTGAAGTC 
    GCAGTTGGTG CTGAGACGGA AGGAGGTGAA GCAACAAAGG CTGCTACCGA TAAGCTCAAG 
    CAGGCAGGAA AGAAGCTCAT GTCCGATGAG GAGGCAGCAG AAGGATCTAT TCAGGGATCA 
    ATGTACAAAC ACTACGCAGC TGCTGGAGGA ACGCTTGTAT TCATTTCTAT CTTTGTTATC 
    CAAGGACTGG GCAGAGCAAG TGAGATCATG GCAAACTTTT GGCTATCGAT CTGGGCGGAG 
    GCCACAACCA ATGCAATGAT GATTCAGCAG CCTCTCACAC AGGAGAAGAC GATGTGGTAT 
    CTCAACATCT ATGCAGCCTT TGGAATTGGG GGTGTCTTGT GTTTGACTTT CCGCTCCATT 
    GCTATGGCTG TTCATCGGTT GCATGCAAGT AAGAAACTGC ACGATGCTTT GACAGATAGA 
    ATATTGCGAG CACCAGTAGC ATTCTTTGAT GTGACTCCCA TCGGGCGTGT GCTTAACAGA 
    TTTGCGGCTG ATATGGACAA GATTGACCTC GAACTTACTC AAAGTCTGGG ACAAGCAGTA 
    TCTACCGTCT TTTCTGTGCT TGGTGCAGTT GGAGCTATTG TTGCCGCCAC CAAGGGAACT 
    CTACTCGTTG CATTCATTCC GATTGGCTAC ATCAACTACG TTATTCAGAA GTGGTTCAGG 
    AAATCATCCA CTGAGTTGCA ACGTGCTGCA AGTGTTGCTA ACTCTCCAAT CTTTACTGAC 
    TTTAGCCAAA TGCTTTCGGG AACCTCCACG ATTCGTGCTT ATGGAAAGCA GTCCAAATTC 
    TTCAACAACT GCCAGACTTC GTTTGATAAC TTCAATGCGA TATATTCTGC AATCCAGCAG 
    GCTTTCTTCT GGCTTGGTCT GAGGCTTGAT GTTCTTGGAG GATCCGTTGG AACAATCATT 
    GGAGCTATCG CGCTTGCTAC AAAAGACACC GGTTTCATTC CTGCAGGATG GGTGGGATTG 
    GCTCTTTCAT ACTCAATCGA GGTCACTGGC TATTTGAAGC ACGGCGTTAG AATGATTGCA 
    ACCGTGGAGG CTGATATGAA CTCTGTTGAG AGGGTTCTGT ATTACTCCAA CAACATTGAG 
    TCTGAAGCAC CATTGGTAAC CGACGAAGAT CCCAAGGTGG AATGGCCTAG CAAGGGAGAA 
    ATAGTGATTC AACATGCAAG TATGAGGTAC AGAGACGGTC CTCTTGTCTT GAAGGATCTT 
    TCTCTCTCCA TCAAGGGAGG GGAGAAGATT GGTGTCGTCG GGCGAACTGG AAGTGGAAAA 
    TCTAGTTTGA TGTCTGCCTT GTTTCGAATC ACTGAAATTG AATCCGATGG TGGCAAGATT 
    CTCATTGACG GAGTTGACAT GGCAAAGATT GGGCTGGGAT TGCTTCGTTT GAACTTGTCA 
    ATCATTCCGC AGGATCCAGT CATGTTCTCC AATACGGTCC GCTACAATCT TGATCCTTTC 
    GGTGAATGCT CCGAGTACGA TCTTTGGGAA GCTCTGAAGA AGGTTCAGTT GGCGGAAGTA 
    GTCGCCGTGC TTCCAGGTGG ATTAGACGAG CAGGTTGTAG AAGGAGGTGA AAACTTCTCG 
    ATGGGGCAGA GGCAGTTGTT GTGTATCGCC AGGTCGCTTC TGAGGAGGCC AAAAATCCTT 
    GTAATGGACG AAGCAACTGC ATCGATAGAC AATACAACGG ATGCCGCAAT CCAACAGATG 
    ATTAGAGAGA ACTTTGCGGA TGCAACCATT CTCACAATTG CCCACAGGCT GAATACAATC 
    ATGGACAGTG ATCGTGTGCT AGTGCTTGAC GACGGACGTG TTGCTGAGTT TGATTCTCCC 
    TCGGCTCTAC TGTCGAAGAC GGAGGGCATC TTCAAATCAA TGGTTGACAA GAGTAAGAGT 
    GCACACAACT CATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002295941.1
    CDS67..3381
    Translation

    Target ORF information:

    RefSeq Version XM_002295905.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 ABC transporter mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002295905.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    ATGACAAGTA CCGGACAGGT GGTCAACATG ATGAGCAATG ATACTTCGCA ATTACAACGC 
    TTCCTCCAGT TCTTTGGGTT TACAATCGTG GCACCCGTTC AGATTGTCAT TGCGTTAGTG 
    TTGATTTATC GACAGGTTGG GAATGCCACG TGGGTGGGAG TGGGCTTCAT GTTCTTGTTA 
    ATCCCAGTGA ATGGTGTGGT GTTTTCGAAT ATTTCCAAGA TGAGGCGTAA GGTGCTCAAG 
    TATTCGGATG CACGTGTCAA GATGGTCAAT GAGATTTTGG GTGGGATTCG TATCATCAAG 
    TTCTACGGGT GGGAGAAGGC GTTTGGAAAG GAGGTGGACC GACTTCGTAC CAAGGAATTG 
    CGAGCGTTGA CTGTACTAGC TTACACGAGT GCTATTGGAT TCTCGTTGAT CATGCTGAGT 
    GCTCCGATTA TCAATCCAAT CTTGGTCTTT TTGGCGTATA TCAATACACA GAGTTCGAGT 
    TTGGATGCGG CCACGGCTTT TACGACAATT GCGTTGTTCA ATATCTTGAG GTTTCCGTTT 
    GCATTCTTAC CAATGGGGTT CCTTCAATTC ATTCAGAGTA GGATTGCATT GAGGCGTCTT 
    TCGCGATATT TGGAGTTATC GGAGTTGTCG AGCTATGTTG TGAATGGTAT GCCGCCGGAG 
    CTAGGGGATG ATGCAGATGC TCCTACGATG GATGATGATA CAAAAGAGAG TCGAATTGCA 
    CTCAAAAACA TTGCATGCTC TATTGAGAGA GGTTCGTTGG TGGCAGTTGT TGGAACTGTC 
    GGTAGTGGCA AGAGTTCGTT GCTGTCCGCC ATTCTTGGAG AGATGGAGCC TATCGATGGG 
    AGCAAAGTGT TCATGCCGAC GAAGGAGGGA GAGGTCTACC ATGACAACCT TGTGAGTTAC 
    TGCTCTCAAT CACCTTGGGT TGTGAATGAT ACTTTGAGAG GCAACATTCT CTTTGGACGG 
    CCTTATGATG ACGACAGATA CAATGAAGTA GTTGCAGCCT GTGCGTTGGT TGATGATCTT 
    GTGGTGCTGC CGGCAGGAGA CATGACTGAA ATTGGTGAAC GCGGTATCAA CTTGAGCGGA 
    GGGCAAAAGG CACGTGTTGC ACTGGCACGT TCCATGTACT CGCAAGAGAC TCAATTGATG 
    CTTTTGGACG ACCCCTTATC AGCGGTGGAT GCTCATGTTG GAGAGCATTT GTTCCGCGAG 
    GCCATTACTG GAAGTATTAG CAAGGGTACC ACAAGAGTGC TTGTTACCCA TCACGTGCAT 
    TTCCTCCCAC GTTGTGACTC GATTCTTGTA CTGGATAAGG GCATGATCAT TCACAGTGGA 
    TCGTATCACG AGCTAGTAGC AAGAGGAGTT GACTTTGCCG GTGCAATTGA AGTTGAACAG 
    AAGGAGGTAG CAGCTGAAGG CGAGAAAGAC GCGGAAGAGA GCAAGCCCGA CGCTGAAGTC 
    GCAGTTGGTG CTGAGACGGA AGGAGGTGAA GCAACAAAGG CTGCTACCGA TAAGCTCAAG 
    CAGGCAGGAA AGAAGCTCAT GTCCGATGAG GAGGCAGCAG AAGGATCTAT TCAGGGATCA 
    ATGTACAAAC ACTACGCAGC TGCTGGAGGA ACGCTTGTAT TCATTTCTAT CTTTGTTATC 
    CAAGGACTGG GCAGAGCAAG TGAGATCATG GCAAACTTTT GGCTATCGAT CTGGGCGGAG 
    GCCACAACCA ATGCAATGAT GATTCAGCAG CCTCTCACAC AGGAGAAGAC GATGTGGTAT 
    CTCAACATCT ATGCAGCCTT TGGAATTGGG GGTGTCTTGT GTTTGACTTT CCGCTCCATT 
    GCTATGGCTG TTCATCGGTT GCATGCAAGT AAGAAACTGC ACGATGCTTT GACAGATAGA 
    ATATTGCGAG CACCAGTAGC ATTCTTTGAT GTGACTCCCA TCGGGCGTGT GCTTAACAGA 
    TTTGCGGCTG ATATGGACAA GATTGACCTC GAACTTACTC AAAGTCTGGG ACAAGCAGTA 
    TCTACCGTCT TTTCTGTGCT TGGTGCAGTT GGAGCTATTG TTGCCGCCAC CAAGGGAACT 
    CTACTCGTTG CATTCATTCC GATTGGCTAC ATCAACTACG TTATTCAGAA GTGGTTCAGG 
    AAATCATCCA CTGAGTTGCA ACGTGCTGCA AGTGTTGCTA ACTCTCCAAT CTTTACTGAC 
    TTTAGCCAAA TGCTTTCGGG AACCTCCACG ATTCGTGCTT ATGGAAAGCA GTCCAAATTC 
    TTCAACAACT GCCAGACTTC GTTTGATAAC TTCAATGCGA TATATTCTGC AATCCAGCAG 
    GCTTTCTTCT GGCTTGGTCT GAGGCTTGAT GTTCTTGGAG GATCCGTTGG AACAATCATT 
    GGAGCTATCG CGCTTGCTAC AAAAGACACC GGTTTCATTC CTGCAGGATG GGTGGGATTG 
    GCTCTTTCAT ACTCAATCGA GGTCACTGGC TATTTGAAGC ACGGCGTTAG AATGATTGCA 
    ACCGTGGAGG CTGATATGAA CTCTGTTGAG AGGGTTCTGT ATTACTCCAA CAACATTGAG 
    TCTGAAGCAC CATTGGTAAC CGACGAAGAT CCCAAGGTGG AATGGCCTAG CAAGGGAGAA 
    ATAGTGATTC AACATGCAAG TATGAGGTAC AGAGACGGTC CTCTTGTCTT GAAGGATCTT 
    TCTCTCTCCA TCAAGGGAGG GGAGAAGATT GGTGTCGTCG GGCGAACTGG AAGTGGAAAA 
    TCTAGTTTGA TGTCTGCCTT GTTTCGAATC ACTGAAATTG AATCCGATGG TGGCAAGATT 
    CTCATTGACG GAGTTGACAT GGCAAAGATT GGGCTGGGAT TGCTTCGTTT GAACTTGTCA 
    ATCATTCCGC AGGATCCAGT CATGTTCTCC AATACGGTCC GCTACAATCT TGATCCTTTC 
    GGTGAATGCT CCGAGTACGA TCTTTGGGAA GCTCTGAAGA AGGTTCAGTT GGCGGAAGTA 
    GTCGCCGTGC TTCCAGGTGG ATTAGACGAG CAGGTTGTAG AAGGAGGTGA AAACTTCTCG 
    ATGGGGCAGA GGCAGTTGTT GTGTATCGCC AGGTCGCTTC TGAGGAGGCC AAAAATCCTT 
    GTAATGGACG AAGCAACTGC ATCGATAGAC AATACAACGG ATGCCGCAAT CCAACAGATG 
    ATTAGAGAGA ACTTTGCGGA TGCAACCATT CTCACAATTG CCCACAGGCT GAATACAATC 
    ATGGACAGTG ATCGTGTGCT AGTGCTTGAC GACGGACGTG TTGCTGAGTT TGATTCTCCC 
    TCGGCTCTAC TGTCGAAGAC GGAGGGCATC TTCAAATCAA TGGTTGACAA GAGTAAGAGT 
    GCACACAACT CATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kr?ger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-J?z?quel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kr?ger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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