ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPS_7213 cDNA ORF clone

THAPS_7213 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPS_7213 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPS_7213 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf09054 XM_002296265.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPS_7213 ( XM_002296265.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002296301.1 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OTf09054
    Clone ID Related Accession (Same CDS sequence) XM_002296265.1
    Accession Version XM_002296265.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1353bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-15
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012070). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGCCAGAGG ATCAATCAAT CCCTTCCAGC AGCAATGCTA TCGGAAGTAA CCGTAGCCTG 
    ACATCTGAAA CTGTCTCATC GTCATCCACC TTAGCCTCGG CGTCCTCTTC GTCCAGCACC 
    GCCACCTCAG TCCAATGTTC TCCCTCCTAC ACCGACACAC TCCTCATCAA CTTTTCCTAC 
    ACAATCGACA CTGCTCAAAA TGATGCAACT TCAATTCAAG CTGCCATTGA CGATGTTGAG 
    AAGAGAGGGC TGACGTGGCT GGTGGATGGA CTGATGCCTT GCAGTGAGAG GAGGAGGCTG 
    GTGGATGGTG CATCTGTTGA GATGAGCGTG GATTCGTACA GAAGAGAAGG CAATGAAGTT 
    TCAAAAGAGG TCACGACAAT AGAATCAAAC GTCGCCTTAG TAGAGAAGAC TGGCGATGAA 
    AGAAGAAGAT ATCTTCGTCC TGAAACTGAC GGAACAACAC AAGATTTAGG TATAGTCGGC 
    TTCAGTTCGT TACCTGCCGA TACCATCTCT AATCTCACTG ACTGCTTCCC CACCAGTGGT 
    GTGAACAGCA CCTGCACCGT AGTCTTTGGT ACGATAACAG CCTATCTCAA CCCCACAAAC 
    TCCGACACAC AATCGCAACA AGATGCAGTA GAACAATCAG TCCTTTATGA AATGATGTCG 
    TTGATGCGAA GTGGTATTCT GGAGAAGGAT TTGACTTCAT TGGAGCACGC TCGGTACTTG 
    AGTCCCATTG TAGTCATGCC CGATGAGCAT TATGGTCTGC ACAATCCGTC ACAATCATCG 
    TATCAAGGCA CGAACGGCGT AGGAATGACA GTTACTCAGA GTATATTAAT CATTGCAGCA 
    TGTGTGGCGA TCATTGGTTC AGCAGGTCTA ATCTTATCAA TCAAAGGCAT TTTTCGCAAT 
    GACGACGATT ACATGAATAG AGAAGAAGAT GAGGGTAGGA TTCCACGATG GTCGAGACGC 
    GGAAACCATG TCCTTGGAGG AAGACGGAAG AGTGTTCAAC AGGTTGTGGT TTCGGATAAG 
    ATTCATCAAC AGACGGAGGA GGGAGATGTT GCTGCTTCAT TGGATGCGAA TGATATTGAT 
    TTGAGTAGGA ATTCAGCAAG GCTGAACGGA GAATCGCGAA GCAGCAGCAA TAGAATGGAC 
    GAGGAGGATT TAGATGTTCT TACTGGAGGG CGTGCATCTC AACAATCTCA CACTGGAGAT 
    GACTGGGGGA CGTCGGCATC CATGACTACA ACAATGCGAC GAGCCATCAT TACAAAAAAG 
    GTTCCTGTTG TCAAGGCCGC TAATCTTGGT TTGGGAGCAG TCATTGAAGA GGACGACGAT 
    GAAGATGTGC CAAGTCCAAA GAGTGTACAA TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002296301.1
    CDS1..1353
    Translation

    Target ORF information:

    RefSeq Version XM_002296265.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002296265.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGCCAGAGG ATCAATCAAT CCCTTCCAGC AGCAATGCTA TCGGAAGTAA CCGTAGCCTG 
    ACATCTGAAA CTGTCTCATC GTCATCCACC TTAGCCTCGG CGTCCTCTTC GTCCAGCACC 
    GCCACCTCAG TCCAATGTTC TCCCTCCTAC ACCGACACAC TCCTCATCAA CTTTTCCTAC 
    ACAATCGACA CTGCTCAAAA TGATGCAACT TCAATTCAAG CTGCCATTGA CGATGTTGAG 
    AAGAGAGGGC TGACGTGGCT GGTGGATGGA CTGATGCCTT GCAGTGAGAG GAGGAGGCTG 
    GTGGATGGTG CATCTGTTGA GATGAGCGTG GATTCGTACA GAAGAGAAGG CAATGAAGTT 
    TCAAAAGAGG TCACGACAAT AGAATCAAAC GTCGCCTTAG TAGAGAAGAC TGGCGATGAA 
    AGAAGAAGAT ATCTTCGTCC TGAAACTGAC GGAACAACAC AAGATTTAGG TATAGTCGGC 
    TTCAGTTCGT TACCTGCCGA TACCATCTCT AATCTCACTG ACTGCTTCCC CACCAGTGGT 
    GTGAACAGCA CCTGCACCGT AGTCTTTGGT ACGATAACAG CCTATCTCAA CCCCACAAAC 
    TCCGACACAC AATCGCAACA AGATGCAGTA GAACAATCAG TCCTTTATGA AATGATGTCG 
    TTGATGCGAA GTGGTATTCT GGAGAAGGAT TTGACTTCAT TGGAGCACGC TCGGTACTTG 
    AGTCCCATTG TAGTCATGCC CGATGAGCAT TATGGTCTGC ACAATCCGTC ACAATCATCG 
    TATCAAGGCA CGAACGGCGT AGGAATGACA GTTACTCAGA GTATATTAAT CATTGCAGCA 
    TGTGTGGCGA TCATTGGTTC AGCAGGTCTA ATCTTATCAA TCAAAGGCAT TTTTCGCAAT 
    GACGACGATT ACATGAATAG AGAAGAAGAT GAGGGTAGGA TTCCACGATG GTCGAGACGC 
    GGAAACCATG TCCTTGGAGG AAGACGGAAG AGTGTTCAAC AGGTTGTGGT TTCGGATAAG 
    ATTCATCAAC AGACGGAGGA GGGAGATGTT GCTGCTTCAT TGGATGCGAA TGATATTGAT 
    TTGAGTAGGA ATTCAGCAAG GCTGAACGGA GAATCGCGAA GCAGCAGCAA TAGAATGGAC 
    GAGGAGGATT TAGATGTTCT TACTGGAGGG CGTGCATCTC AACAATCTCA CACTGGAGAT 
    GACTGGGGGA CGTCGGCATC CATGACTACA ACAATGCGAC GAGCCATCAT TACAAAAAAG 
    GTTCCTGTTG TCAAGGCCGC TAATCTTGGT TTGGGAGCAG TCATTGAAGA GGACGACGAT 
    GAAGATGTGC CAAGTCCAAA GAGTGTACAA TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kr?ger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-J?z?quel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kr?ger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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