ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPS_25419 cDNA ORF clone

THAPS_25419 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPS_25419 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPS_25419 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf09068 XM_002295438.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $713.30
$1019.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPS_25419 ( XM_002295438.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002295474.1 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OTf09068
    Clone ID Related Accession (Same CDS sequence) XM_002295438.1
    Accession Version XM_002295438.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3807bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-15
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012081). COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    ATGCAGCTTC TCGACAGCTG TCCTCTCCCC CAAGCACAAT TTGCAAGCTT GAGTCTCTTG 
    GTGCAACTTC GTGATTCTTC CGTTGCTGCT GTTGTTGTTG TTGATGATCA TCAAGACGCT 
    ACTGCTGCTG ATGATGATGA TGATGATGTC AACGACCGTT CCACAAACTA CAGTGGCTCA 
    ATGAACAACA ACAACGACGA CGACAATGGT CCAAATGTCG GCGAGGGTAT CGATGGTGAA 
    GACAATGGAG ACAATGGCAT GGACGATGAC GAACAACAGC AGCAGCTCAT CATACAAAAC 
    GTCTCCTCTG ATGAAATCGA ATCCAATTCC CATAGTGTCA AAATGACTCA GGTTCGTACC 
    ACCACCACCA CCGCCGTCGG CGTGGGTGGT GACGAAAGGA GTACCAGTCG TGGAGGCGGG 
    AAGCACAAGT TTGTACCCCT CTACGAAAAA GGAATGAGAG TGTATTACAA ATCCAATAAA 
    AACCACCGCA GTTCCTTCGG TAATGACGGT GATGGTGGCA TGATAACAAA CCACAATATT 
    CTTCAACAAC AACAACAACA ATGGGATGGA AATGTTCTAT TATCCAAAGC CACTATTCTA 
    TCTGTGCATT TTGACGATCT CCTGGAGCCA TATTATACCA TACGTTTGGA CGATGGGAGA 
    GAGAAGCAGA CTGACAATTT GCACATTACG ATGAAGAAAG GAGGAGCCAC TGCTGCTGCT 
    GATGCTATTG AAAGCAATGG AACAGATAAA GGAACTACCG ACAACTCCTC GACACTCGCC 
    GCCACTGACG GTCTATTCCA AAATGTCCAC CAACAAACAC CACTGCACGA ATGTGGCGTG 
    GAGAATAATA CCCCCAAAAA GAACGAGGCG GATAAATCGG CGGGTCTCCC TCACAAAAAA 
    CAACAACGAC ACAACAATTC GTCATCATTG GTATATTCAG TGTTACGACA GGATTTAACT 
    GTTGTTTCGC CATTGACTAT TTTGAGTGAG GGGGATTGTA AGAGGTCTTT GGAAAGTTTG 
    TATGGCGTGT TGATGAGGGA GGGGGGAATG AGGGATGACT ATCTCGGTTT TATTGGTGGT 
    GGAAGTGGAC GTGATTTATG TGATGTTGGT GATGATGAGA AGGATGGAAA GGATCGTGTT 
    GGGGGTGGTG GTGCAAGTGG TAGCATGGGA GAGGAGAAGG AATCAGAAGA ACATGGTATC 
    GGTCGTCGTA GTTCACGTGT TCGTTTCCAC GACGATACCA AAAAGGGTTC AGCCAATGGT 
    GTTACTGTAA CGAATGGAAA CAATGCTTCT TCCAATAGTA GCGTCAAGAG TTCTTCCAAA 
    AGTCGTGGTT CCTTTGGTAG TACATTGCCA GTGAGAGTGT ACAAGCCGCC ATCCAGGCAT 
    TTGAACTGTT CGTTGGGGTT GACGTTATTC TATGTCGCTG TTCCTGTGGA AGATGTGTCC 
    AAGTTGAATA ATAGCGTGGG TGGTGATTCA GCAGAGAAGG ACGCAATCAA GACGTTTCAG 
    CAGGCTGCTT CGGTGTTGCT CCCGGGTATT TCTTTGGATT CGGTGTGGGC ACCATCAAAG 
    CAAACGGATC GCAGAGGTGT AGGAGGACTG AACACTGCAA AGCAAGAGGG TATCATTCTG 
    CTTACTGTGG GGACTACCGG ACCAGCTTAC GATTTGTACG GTGCCTCGTC GGTATTTGCA 
    ACGTTGCCGC AACGATTAAG AGACTGCATG GGAATGCTGT CGGCCTTGGA TACTACACCA 
    AAGATGAGCG TGCCTCAACA ACAGCAGCAA CAGAAGCAAC TTGAAAGTGA TAAAAAGCTT 
    CCGAAGGGCA AATCAAAGAA AGGAAAAGGC AAAGGAAGTG TTGCTGGAAC TCCCGAGGCA 
    CAACCGCAAT CGCCACAGTC AACGTTTGAT TCGGCCTACT TCAAACGACT GTACATGGCA 
    CTTCTTGCTA CCCTCGTTGA TGATGAAGAT GGCTTGATGA GGAAGGATGA TGACTTGTTT 
    GACGCGCCAT TCGGGATGGG GGTTCCTGAG GCCCCTTTTG CTAACAAAAT TGCTTCCTCG 
    ACCAAGAGTC CAATTGAGGC TAGTACTCCC ACTGGAAAGA CGAAGCTGAA ACGGTTCACA 
    TTCTCGCGGA ACAAAGTTGG AAAAGCCAAA CAAGAGTATG AGTCTGGGGA GTCCATTGCT 
    GGCGGAGAAG CTTTGGAGGG AGAAGTTGAG GGCGCCGGTA CGGACGACGG AAAGCCATTG 
    AATGCTGCTG ACATTGTCAG ACGGACAGCA CTGCAATTGG AGGTACTTTC GCTCGCAGAA 
    GATGAAATGT CTCTGCCAAA GTATGAACAT GCAGGAGAGG GTGATCGCAA ACGTGCACCA 
    TTGGCAAGAT CGCCCAAGGC GGGATCAGGT GGGAGCTCTG GAAGATTTGG CCGGAGAGAA 
    GTCCCATCTG ATTTGGCTGG TTTTGACTAT CGACCAATGG TCGTGGGTGT TGGAGGAACA 
    TCCTTATCTG GCACTGCCTC AACGTCTGTA ATGGGTACTT CATCCGATGA TGCTTCGGTC 
    GTTACGGGGG ACGGCACTGC CACGATCACT TCCAGATTTA CATCGGCGTC TCATTCGTCT 
    GTCCCTACCC TTTCCAAACC AAAGAAGGAT TCTTTCGTGA CATCCGTTAG ATCTAGGTTC 
    GTGCAGAAGA GAAAAGTAAA ATCCAACAAA GCAGCATCGA CTGACAATGC TCGTCCTAAA 
    CCTCCATTGA TTCCACGGGA GAAAGAAACG CCGCCACAAG CAGTATTTGA TCCATTTCTG 
    GACGATGACG GTGAAGAAGA AGAAGAAGAA GAAGAAGAGG TTAACCATGC AGAAGGTGAA 
    GCAGAATCAG TGGCATCGGC TTCTACCAAG GATACTCCAC AAACACCAGC TTCTCCGCAA 
    ATTGTCGGTG CGATTAGTCG TAGCTATTCA GAGGACGGAA GTGAAGGCGT TCGTTCCGTG 
    CCTGAAAGTG CTACTTCTGC TCCGTCCACT CCGAAAGAAG TCGAAGAAGA GGAGAAGCCC 
    GTGAGACATT TGAATGTGGA TTTAGCTTTG AACGAGGACT TGACGTGCGA GTATAAGAAG 
    TCAAAGCTAT CCTCGATATC AGTGGAGGGA ACCGTTCAGG TTCGAGTCAA GACCAGTTAT 
    GAAGATGAGG AGGCACGGGA ACAAATGCAA CCCATTCCAT TCTACTTGAT CTTTCAGGAT 
    GGATCTAGTC ATATTAAGGC ACTTCAAGAG AACAAAAAGT TTGTTGAGCA TGTATCACTT 
    GAAGGAGGTG CTGAGCGGGA GTTTACATAC TCAATTACAG TGCCGAGGGA GGAACAGTAT 
    TTCCCTGTAG TGCGGTACAA GTGTAGCAGT TCACTTCGTC CAGTCCCAAT CCGTGTTCAA 
    AATCGCGTCA GAACTCAAGG GAAATCCTGC CGAGTGGCAC TTCAGATAAG CTCCAATCCC 
    CAGAACCCGA ACGAGCTTGT ACAACTCACA ATCATTATGG GTGTTCCCTC GGGGGTCCGC 
    GGAGAGTCTC TCCAATGCAA CCCTCCCGGG GGTGTATGGA ACGAAGCAAA GAGTGTAGTC 
    TTGTGGTGTG TTAGTGAGCT TGGGGGGGGA GAAAAGTTCC AGTTGCAAGC CATCTTTGAC 
    ATTGATGATG AGCTATTGAA CTCCTCTGAG GGCGATATGA CAGATCTCGC GGAAAAGCTT 
    GAGTTCCCTG TGTTAGCACG GTGTCAGTGC TCTTCGGCTC AGCTGAGTAA CGTTATGCTA 
    GAGGTATCGG ATGTGCCAGA TTTGTTTCCT GCGGAAGTAT CGAAGAGTGT GATCAGACGC 
    TTCCGAGTGG CACACAAGGA GAAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002295474.1
    CDS1..3807
    Translation

    Target ORF information:

    RefSeq Version XM_002295438.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002295438.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    ATGCAGCTTC TCGACAGCTG TCCTCTCCCC CAAGCACAAT TTGCAAGCTT GAGTCTCTTG 
    GTGCAACTTC GTGATTCTTC CGTTGCTGCT GTTGTTGTTG TTGATGATCA TCAAGACGCT 
    ACTGCTGCTG ATGATGATGA TGATGATGTC AACGACCGTT CCACAAACTA CAGTGGCTCA 
    ATGAACAACA ACAACGACGA CGACAATGGT CCAAATGTCG GCGAGGGTAT CGATGGTGAA 
    GACAATGGAG ACAATGGCAT GGACGATGAC GAACAACAGC AGCAGCTCAT CATACAAAAC 
    GTCTCCTCTG ATGAAATCGA ATCCAATTCC CATAGTGTCA AAATGACTCA GGTTCGTACC 
    ACCACCACCA CCGCCGTCGG CGTGGGTGGT GACGAAAGGA GTACCAGTCG TGGAGGCGGG 
    AAGCACAAGT TTGTACCCCT CTACGAAAAA GGAATGAGAG TGTATTACAA ATCCAATAAA 
    AACCACCGCA GTTCCTTCGG TAATGACGGT GATGGTGGCA TGATAACAAA CCACAATATT 
    CTTCAACAAC AACAACAACA ATGGGATGGA AATGTTCTAT TATCCAAAGC CACTATTCTA 
    TCTGTGCATT TTGACGATCT CCTGGAGCCA TATTATACCA TACGTTTGGA CGATGGGAGA 
    GAGAAGCAGA CTGACAATTT GCACATTACG ATGAAGAAAG GAGGAGCCAC TGCTGCTGCT 
    GATGCTATTG AAAGCAATGG AACAGATAAA GGAACTACCG ACAACTCCTC GACACTCGCC 
    GCCACTGACG GTCTATTCCA AAATGTCCAC CAACAAACAC CACTGCACGA ATGTGGCGTG 
    GAGAATAATA CCCCCAAAAA GAACGAGGCG GATAAATCGG CGGGTCTCCC TCACAAAAAA 
    CAACAACGAC ACAACAATTC GTCATCATTG GTATATTCAG TGTTACGACA GGATTTAACT 
    GTTGTTTCGC CATTGACTAT TTTGAGTGAG GGGGATTGTA AGAGGTCTTT GGAAAGTTTG 
    TATGGCGTGT TGATGAGGGA GGGGGGAATG AGGGATGACT ATCTCGGTTT TATTGGTGGT 
    GGAAGTGGAC GTGATTTATG TGATGTTGGT GATGATGAGA AGGATGGAAA GGATCGTGTT 
    GGGGGTGGTG GTGCAAGTGG TAGCATGGGA GAGGAGAAGG AATCAGAAGA ACATGGTATC 
    GGTCGTCGTA GTTCACGTGT TCGTTTCCAC GACGATACCA AAAAGGGTTC AGCCAATGGT 
    GTTACTGTAA CGAATGGAAA CAATGCTTCT TCCAATAGTA GCGTCAAGAG TTCTTCCAAA 
    AGTCGTGGTT CCTTTGGTAG TACATTGCCA GTGAGAGTGT ACAAGCCGCC ATCCAGGCAT 
    TTGAACTGTT CGTTGGGGTT GACGTTATTC TATGTCGCTG TTCCTGTGGA AGATGTGTCC 
    AAGTTGAATA ATAGCGTGGG TGGTGATTCA GCAGAGAAGG ACGCAATCAA GACGTTTCAG 
    CAGGCTGCTT CGGTGTTGCT CCCGGGTATT TCTTTGGATT CGGTGTGGGC ACCATCAAAG 
    CAAACGGATC GCAGAGGTGT AGGAGGACTG AACACTGCAA AGCAAGAGGG TATCATTCTG 
    CTTACTGTGG GGACTACCGG ACCAGCTTAC GATTTGTACG GTGCCTCGTC GGTATTTGCA 
    ACGTTGCCGC AACGATTAAG AGACTGCATG GGAATGCTGT CGGCCTTGGA TACTACACCA 
    AAGATGAGCG TGCCTCAACA ACAGCAGCAA CAGAAGCAAC TTGAAAGTGA TAAAAAGCTT 
    CCGAAGGGCA AATCAAAGAA AGGAAAAGGC AAAGGAAGTG TTGCTGGAAC TCCCGAGGCA 
    CAACCGCAAT CGCCACAGTC AACGTTTGAT TCGGCCTACT TCAAACGACT GTACATGGCA 
    CTTCTTGCTA CCCTCGTTGA TGATGAAGAT GGCTTGATGA GGAAGGATGA TGACTTGTTT 
    GACGCGCCAT TCGGGATGGG GGTTCCTGAG GCCCCTTTTG CTAACAAAAT TGCTTCCTCG 
    ACCAAGAGTC CAATTGAGGC TAGTACTCCC ACTGGAAAGA CGAAGCTGAA ACGGTTCACA 
    TTCTCGCGGA ACAAAGTTGG AAAAGCCAAA CAAGAGTATG AGTCTGGGGA GTCCATTGCT 
    GGCGGAGAAG CTTTGGAGGG AGAAGTTGAG GGCGCCGGTA CGGACGACGG AAAGCCATTG 
    AATGCTGCTG ACATTGTCAG ACGGACAGCA CTGCAATTGG AGGTACTTTC GCTCGCAGAA 
    GATGAAATGT CTCTGCCAAA GTATGAACAT GCAGGAGAGG GTGATCGCAA ACGTGCACCA 
    TTGGCAAGAT CGCCCAAGGC GGGATCAGGT GGGAGCTCTG GAAGATTTGG CCGGAGAGAA 
    GTCCCATCTG ATTTGGCTGG TTTTGACTAT CGACCAATGG TCGTGGGTGT TGGAGGAACA 
    TCCTTATCTG GCACTGCCTC AACGTCTGTA ATGGGTACTT CATCCGATGA TGCTTCGGTC 
    GTTACGGGGG ACGGCACTGC CACGATCACT TCCAGATTTA CATCGGCGTC TCATTCGTCT 
    GTCCCTACCC TTTCCAAACC AAAGAAGGAT TCTTTCGTGA CATCCGTTAG ATCTAGGTTC 
    GTGCAGAAGA GAAAAGTAAA ATCCAACAAA GCAGCATCGA CTGACAATGC TCGTCCTAAA 
    CCTCCATTGA TTCCACGGGA GAAAGAAACG CCGCCACAAG CAGTATTTGA TCCATTTCTG 
    GACGATGACG GTGAAGAAGA AGAAGAAGAA GAAGAAGAGG TTAACCATGC AGAAGGTGAA 
    GCAGAATCAG TGGCATCGGC TTCTACCAAG GATACTCCAC AAACACCAGC TTCTCCGCAA 
    ATTGTCGGTG CGATTAGTCG TAGCTATTCA GAGGACGGAA GTGAAGGCGT TCGTTCCGTG 
    CCTGAAAGTG CTACTTCTGC TCCGTCCACT CCGAAAGAAG TCGAAGAAGA GGAGAAGCCC 
    GTGAGACATT TGAATGTGGA TTTAGCTTTG AACGAGGACT TGACGTGCGA GTATAAGAAG 
    TCAAAGCTAT CCTCGATATC AGTGGAGGGA ACCGTTCAGG TTCGAGTCAA GACCAGTTAT 
    GAAGATGAGG AGGCACGGGA ACAAATGCAA CCCATTCCAT TCTACTTGAT CTTTCAGGAT 
    GGATCTAGTC ATATTAAGGC ACTTCAAGAG AACAAAAAGT TTGTTGAGCA TGTATCACTT 
    GAAGGAGGTG CTGAGCGGGA GTTTACATAC TCAATTACAG TGCCGAGGGA GGAACAGTAT 
    TTCCCTGTAG TGCGGTACAA GTGTAGCAGT TCACTTCGTC CAGTCCCAAT CCGTGTTCAA 
    AATCGCGTCA GAACTCAAGG GAAATCCTGC CGAGTGGCAC TTCAGATAAG CTCCAATCCC 
    CAGAACCCGA ACGAGCTTGT ACAACTCACA ATCATTATGG GTGTTCCCTC GGGGGTCCGC 
    GGAGAGTCTC TCCAATGCAA CCCTCCCGGG GGTGTATGGA ACGAAGCAAA GAGTGTAGTC 
    TTGTGGTGTG TTAGTGAGCT TGGGGGGGGA GAAAAGTTCC AGTTGCAAGC CATCTTTGAC 
    ATTGATGATG AGCTATTGAA CTCCTCTGAG GGCGATATGA CAGATCTCGC GGAAAAGCTT 
    GAGTTCCCTG TGTTAGCACG GTGTCAGTGC TCTTCGGCTC AGCTGAGTAA CGTTATGCTA 
    GAGGTATCGG ATGTGCCAGA TTTGTTTCCT GCGGAAGTAT CGAAGAGTGT GATCAGACGC 
    TTCCGAGTGG CACACAAGGA GAAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kr?ger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-J?z?quel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kr?ger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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