ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPS_11045 cDNA ORF clone

THAPS_11045 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPS_11045 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPS_11045 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf09081 XM_002295454.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 12-14 $426.30
$609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPS_11045 ( XM_002295454.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002295490.1 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OTf09081
    Clone ID Related Accession (Same CDS sequence) XM_002295454.1
    Accession Version XM_002295454.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2490bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-15
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012081). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    ATGTCACAAC AATATCATCA GTATCCACAC ACTCCGTCCG AGTTCAACTT TGCCAAAAAG 
    ACATTAAAGA GGCTGGTTGA AGAATCGACG CTCTTTGCTC CTGTTTCTGG AAGAGGTGGA 
    ATCGTCGGTA GGCGAGGAGA CGACGATGTA GGTGATGCAA CGTGTGTAGT AGAGGAGTGG 
    TTTCTCCCCT ATGATGATAC AGCTGATGAC GTTGGTGGCG GTGGCGACGA CGATGGAATG 
    GGAGGACAGT TGAGCAGATT GAACATTAGC AATTGTGGAT CAGCATCATC TGACATTATA 
    CGAAGACGGA ACAGCGGCGA TGGTGGTGGT GACGGAAGCG GCAGCTATCG AAGAATGCAC 
    AGCGAAGGCT ACATTACAAC ATCCTACAAT TCATCGGGAA GAGAGCAGCA GCAGGGGAAC 
    AACAGCAATG ACGACGGGAG ACGGATGAAA CGAAGGACGA CACTGGATGC TGTCTCCTTT 
    CCATGTCCAT CTGCCACCCT CTCTACCGCC AACAATAACT GGGTAATCCT CGGGGGAAGC 
    AACTGCGATA TCAGCAGTGG AAACAACAAC ATCATCAGCC GAAAGATCAC TGGAACCTCA 
    CTAGACAATG CCAGTAGCGC CTCCTTTACA ACCGCATCCA CTTATCACTC CAAAAGAATT 
    TCCAATTCCA ATGCAAACAA AGGGGTACTT AGTCAGAATA ATAATGGACT GGCGAGGACG 
    AACGTGAGAC AGATTCATGA AAGTCTATTG AATATTGGGG GTTTGTTGGG TCAAGGTGGC 
    TTTTGTGAGG TGCGGTTGAC CTCGTTGAAG AAGAAACAGC GACAAAGGAG GGGAAGCAAC 
    AGCAACATCA ATAGCAAGGG AGGCGAAGGA ATGGGAGACG AAACAGAAAC AGAGGAATAC 
    TACGCAATGA AGTATTTGTC ACCGAGCAAA ACTGCTCTCA GAGCATCATC TGCCAAGTCA 
    AAGTCGTCTT CCACCACTTC CAACACAATC AATAGTGACA GTAATGCAAA CAACGACAAC 
    ATCAAAGGGA AGAAACAAAA ACCCAACAAA CAATTCGAAC GAGGCATAGC CGATCTAGCC 
    ATGGAGGCTC GTTTCCTCTC AGTATTGAGT CACGAGTACA TTATCGGATT GTACTTCGTA 
    AGCGAGGGGA GTTTGGAAGA GAATTTCAAC CTTGGGGGAA GGAGGGAACG GTATCATCAT 
    CAATTTGGAT ACTTCTTATT GTTGGATCCA CTGTGCGAAA CGTTGAGTCA TCGGATTGAT 
    TACACCTACA TTCCTCTGGC GATATCGGCT CCTTTCCCAA CTTTGTCGAG AGGTGGTGGG 
    AAATCAACTT GGTTGAAACG AATGCTTCAT ATTGATCACA ACTATTATCA GCAGCAGAAC 
    AGGTTGAATC ATTCCATTGG CACCGTCGCC ACTGCAAGCA AAAGCAGTTC TTCAAACGAC 
    ATTCAAGACC CACGAGTGCA ACTAGCCCAA CGTCTACACA GCGTCCAATG CATAGCCTCG 
    GCATTGCAAT ACCTTCACGA AAAGCGTATT ATCTTTAGAG ATATCAAGCC TGACAACATT 
    GGTTTCCATC GGAGGTATCA TTCTCGGTGT CATTGTGGTT TCTCTCAACG ACAGCAACAA 
    CAGCAACGGC GTAACTCCAA TGGAAACAAC CACATCAACA ACGATGAGGT CAAGTGCACT 
    TGCTACGATG ATATACCAAA GCTATTTGAC TTTGGCTTGG CGAAGGAACT CAAGCCCAAA 
    TACCTCAAAC AGCATCCTGA TCACGACGAC GGTAGAGACA ACAACTATTA CAGCACTAAC 
    TCCACGTTCA AACTGACGAG TTGCACTGGA TCAAGACGAT ACATGGCTCC AGAAGTTGCA 
    TTCTCGCTAC CATACAATCA GAAAGTGGAC GTGTACTCCT TCGGTCTCGT ATTGTATCAA 
    GTATCAGCGT TGGTTACTCC TTTTGATGGA TTCGGAATGG TCCGCCACGA GAAGGAAGTG 
    TTGAGTGAAG GATTGCGACC TGATACCAAG ATACCGTCCA CTTCATCGTT GAAACGTCTG 
    CTTGCCGGGG CGGGGAGTGG GTGTACGGAT GAAACTGGTG TTGTGGATGA TGGTGTTTTA 
    GCTGAAAAGA ACAAATACTG TTGGACTAAA AAGTTGAGGC AGATTATGGA GGAGTGTTGG 
    AATGGGGATA TGAGGTTGAG ACCTGAGATG AAAGATGTAG TTTCAAGATT GGAGGGCTGT 
    CGCCGAGAGC TGATGCCAAT GGAGAGGGAG AGGAGCGTCT CTGCTTCAAC TAGAAATGCC 
    ACAAGCACAT CTTGTGTAGT AGATGACAAC AAAGCTGAAC CGAAGCAATC TACAAATGTC 
    GCCTCCAAGC CCACTGCTGC GCAGATTGCA AAAAAGAAGA AGAAAAAGAA GATGCTACAC 
    GAGCTGTTGC ATCAAGATAA TGACGATAGC TACCATCGCA AAGAGACGAT TGCAACTCAA 
    GAGTTAAGTA GCAGTTTGGG GAGTGGATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002295490.1
    CDS1..2490
    Translation

    Target ORF information:

    RefSeq Version XM_002295454.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002295454.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    ATGTCACAAC AATATCATCA GTATCCACAC ACTCCGTCCG AGTTCAACTT TGCCAAAAAG 
    ACATTAAAGA GGCTGGTTGA AGAATCGACG CTCTTTGCTC CTGTTTCTGG AAGAGGTGGA 
    ATCGTCGGTA GGCGAGGAGA CGACGATGTA GGTGATGCAA CGTGTGTAGT AGAGGAGTGG 
    TTTCTCCCCT ATGATGATAC AGCTGATGAC GTTGGTGGCG GTGGCGACGA CGATGGAATG 
    GGAGGACAGT TGAGCAGATT GAACATTAGC AATTGTGGAT CAGCATCATC TGACATTATA 
    CGAAGACGGA ACAGCGGCGA TGGTGGTGGT GACGGAAGCG GCAGCTATCG AAGAATGCAC 
    AGCGAAGGCT ACATTACAAC ATCCTACAAT TCATCGGGAA GAGAGCAGCA GCAGGGGAAC 
    AACAGCAATG ACGACGGGAG ACGGATGAAA CGAAGGACGA CACTGGATGC TGTCTCCTTT 
    CCATGTCCAT CTGCCACCCT CTCTACCGCC AACAATAACT GGGTAATCCT CGGGGGAAGC 
    AACTGCGATA TCAGCAGTGG AAACAACAAC ATCATCAGCC GAAAGATCAC TGGAACCTCA 
    CTAGACAATG CCAGTAGCGC CTCCTTTACA ACCGCATCCA CTTATCACTC CAAAAGAATT 
    TCCAATTCCA ATGCAAACAA AGGGGTACTT AGTCAGAATA ATAATGGACT GGCGAGGACG 
    AACGTGAGAC AGATTCATGA AAGTCTATTG AATATTGGGG GTTTGTTGGG TCAAGGTGGC 
    TTTTGTGAGG TGCGGTTGAC CTCGTTGAAG AAGAAACAGC GACAAAGGAG GGGAAGCAAC 
    AGCAACATCA ATAGCAAGGG AGGCGAAGGA ATGGGAGACG AAACAGAAAC AGAGGAATAC 
    TACGCAATGA AGTATTTGTC ACCGAGCAAA ACTGCTCTCA GAGCATCATC TGCCAAGTCA 
    AAGTCGTCTT CCACCACTTC CAACACAATC AATAGTGACA GTAATGCAAA CAACGACAAC 
    ATCAAAGGGA AGAAACAAAA ACCCAACAAA CAATTCGAAC GAGGCATAGC CGATCTAGCC 
    ATGGAGGCTC GTTTCCTCTC AGTATTGAGT CACGAGTACA TTATCGGATT GTACTTCGTA 
    AGCGAGGGGA GTTTGGAAGA GAATTTCAAC CTTGGGGGAA GGAGGGAACG GTATCATCAT 
    CAATTTGGAT ACTTCTTATT GTTGGATCCA CTGTGCGAAA CGTTGAGTCA TCGGATTGAT 
    TACACCTACA TTCCTCTGGC GATATCGGCT CCTTTCCCAA CTTTGTCGAG AGGTGGTGGG 
    AAATCAACTT GGTTGAAACG AATGCTTCAT ATTGATCACA ACTATTATCA GCAGCAGAAC 
    AGGTTGAATC ATTCCATTGG CACCGTCGCC ACTGCAAGCA AAAGCAGTTC TTCAAACGAC 
    ATTCAAGACC CACGAGTGCA ACTAGCCCAA CGTCTACACA GCGTCCAATG CATAGCCTCG 
    GCATTGCAAT ACCTTCACGA AAAGCGTATT ATCTTTAGAG ATATCAAGCC TGACAACATT 
    GGTTTCCATC GGAGGTATCA TTCTCGGTGT CATTGTGGTT TCTCTCAACG ACAGCAACAA 
    CAGCAACGGC GTAACTCCAA TGGAAACAAC CACATCAACA ACGATGAGGT CAAGTGCACT 
    TGCTACGATG ATATACCAAA GCTATTTGAC TTTGGCTTGG CGAAGGAACT CAAGCCCAAA 
    TACCTCAAAC AGCATCCTGA TCACGACGAC GGTAGAGACA ACAACTATTA CAGCACTAAC 
    TCCACGTTCA AACTGACGAG TTGCACTGGA TCAAGACGAT ACATGGCTCC AGAAGTTGCA 
    TTCTCGCTAC CATACAATCA GAAAGTGGAC GTGTACTCCT TCGGTCTCGT ATTGTATCAA 
    GTATCAGCGT TGGTTACTCC TTTTGATGGA TTCGGAATGG TCCGCCACGA GAAGGAAGTG 
    TTGAGTGAAG GATTGCGACC TGATACCAAG ATACCGTCCA CTTCATCGTT GAAACGTCTG 
    CTTGCCGGGG CGGGGAGTGG GTGTACGGAT GAAACTGGTG TTGTGGATGA TGGTGTTTTA 
    GCTGAAAAGA ACAAATACTG TTGGACTAAA AAGTTGAGGC AGATTATGGA GGAGTGTTGG 
    AATGGGGATA TGAGGTTGAG ACCTGAGATG AAAGATGTAG TTTCAAGATT GGAGGGCTGT 
    CGCCGAGAGC TGATGCCAAT GGAGAGGGAG AGGAGCGTCT CTGCTTCAAC TAGAAATGCC 
    ACAAGCACAT CTTGTGTAGT AGATGACAAC AAAGCTGAAC CGAAGCAATC TACAAATGTC 
    GCCTCCAAGC CCACTGCTGC GCAGATTGCA AAAAAGAAGA AGAAAAAGAA GATGCTACAC 
    GAGCTGTTGC ATCAAGATAA TGACGATAGC TACCATCGCA AAGAGACGAT TGCAACTCAA 
    GAGTTAAGTA GCAGTTTGGG GAGTGGATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kr?ger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-J?z?quel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kr?ger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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