ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPS_25438 cDNA ORF clone

THAPS_25438 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPS_25438 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPS_25438 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf09083 XM_002295456.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $510.30
$729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPS_25438 ( XM_002295456.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002295492.1 Thalassiosira pseudonana CCMP1335 predicted protein mRNA.
    Price & Availability↑
    CloneID OTf09083
    Clone ID Related Accession (Same CDS sequence) XM_002295456.1
    Accession Version XM_002295456.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2691bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-15
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012081). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    ATGAGCACCG ACGACAACAA CATCATGCCA GAAGACTGGC AGAATAATCC ACCTCCCCTG 
    CCACAGGACA ATTGGCAGAA TAATGAGCAG ACAAGCAACT ACGACAACGG CAACAGCAAT 
    GGAGGGCAGT ACAGCACGCA TCATCAACAA CAACCACCGC AGGAGCAGGT GAACCGTGCT 
    CAATCGTCGT ACAACAATCA ATACAGCACC TCCCAATACA ACTCCAACCA ACAACAAGAA 
    CAACACTACC AACAGCAGCA GCAACAACAG CAGCTTCAAC TATGCGCCTC GTGCGATCGA 
    TGCCGCGCTC GAAAAACGAA ATGCGATGGA GAACGACCGT GTGGGAACTG TGTCAATAAG 
    CTCAAGAAGA AGTTGAAGCT TGACAACGTG GACGGAATCG ACATTGCCGA ATTCGACTGT 
    GTTTACTCCC CCGCCAAACG ACGTGGCCCC ATCCCCGGTA AGACGGGGCA GTCTCGTAAA 
    TCGAGTGAAA TGATGTATCA GCAGCCGCAG CAGAGGGGAG GAGGATATCT CGGTAGTGGG 
    GGGGGAGGAG GATACCCCCA GCAGCAGCAT GGTCTGCAAG GGGGAGGGTA TAATTTTGGG 
    GGAGGACAGC AGCAGCAACA ACAACAACAG TGGATCAACA GCAACAACAA CCAAGGAAGT 
    CAATTCTCCT CCGAAGAATT GAAACAAATG CTATCACTCC AACAGCAGCT TCTCATTCAA 
    CAGCAGCAAA TGCAGCAACA GCAACAACAG CAGGGGATGC TTCAACAGTT GGCTACTGTG 
    ACGAGTGGTG TTGGAAGTAG TGGTATTGGA GGGGCAGGTG GTATTGGAGG AATGGGGAAC 
    ACCAACAATG TCCAGGTGGA AAATGGAGCA TTGCAGCTTC TTCAGCAGTA TCAACAGCAG 
    TTGAACAGTG GAAACAACAC GCTGGGTAGT AGTGGAAGCA TCAACATGGG ACTGGGATCT 
    CAACCCTCTC CCATGCCGTC ATCCTCCTAC AATCAAGAAC AACAACAGCA ACCTACCAAA 
    CGTGCCCATC GCCTTGAGCC TGTACTATCC AACGCCAACT CCACCAATCT CCCCAACTCG 
    GTCGCCTCAC ACCTCCCCCT CCTCTCCCTC CACAACCCCG ACGGCAACGT CCTCCGCTCC 
    TACTACCAAC TCAGCGTCAA CGATCTCCTC AACCTCCCCC CCATCCCCAG CGACGAAGAC 
    TACTGCACCA TCCTCTCTCA AAATAACTAC AACTGCCTCC CGAGCAATCT TCCCACCTAC 
    GACCAATCGG CATTGCAAGC GGCGCGGTTT GCAGAGTTGG CATTGGGAGC GTTGGCGAAC 
    AATCAGGTTC CGTTGGCTTT GGAGTTGAGT AATGCTTCGG TAATGTGTAT GAGAAATTGT 
    GTGGAGGAGC CGAGTCACAA GAGTTGTATC TATGATGTGG CGAGGGCGTA TTTGTTGCAT 
    GGGATATTTA GGAGTTTTAG GGGAGACTTT GTGAGGTATT TCAAGTATCG CAGGGTATGC 
    ATGAGTCATC TTTCGCAGTT GAATAACGAA CCCAACGTGG AAGCTCTCCT CGCTGCCATT 
    TCCTATCACG ATGCCCTCGC ATACATGATG CACAACGCAA GTGAAGATGC CCTCCCCGAC 
    ATTGACGAAG TATTGCCTCG TCTCAACGAC TGCGGTAAGA ACGATTCTGG CTGTGACATT 
    GAGGCCAAGT ACGGCATTTC CACCAATGCT TCGTCCGTTG TAACAAACGC CAACAACCAA 
    ATGTGGATGC AGGGTGCTCC TCCCGTCTTC TTGAACAATG AAGCCAGTCT CGTCAATCGT 
    TCGTTAGATG CCTTGGCTTG CGCTGTCCGT TCGTGCTGTG ATCAAGCCAA TTCCAGCTTT 
    GAGGAGATGG CGAAGGAAGC AGGAGTTGAT TTGCCTGCAG GGGGAGGATC TTGTGGAACG 
    AGTGCTACCA CGCAAGCTGT GATGGCGAAT GAAAACGAGT TGTGCAGTCG CAACATTGTG 
    CTTTCGGCTC AGACTCTTCT CAGTCAGCAT GCGGGCACGA GTCACGAGAA GAGTAAGAAG 
    CATGGGCTTG TCATGGTAGC TACGGCAATG GAAGCCTTTT TGGAGAATGG GGGAGGAGAT 
    GAGGAAGGAA TGGGAGGTTT CACCGACAAG CAGATTAAGA ACTTGTTGGC TGTGTGTAAT 
    ACGATTGTCA AGAATCCGTT GCTACTCTTT GCGCCTGGAC CGACGTATCA TATGGTTAGC 
    AACGTGGCGA TTTTGTTGTG CCATCTGTTG AATGGAATAC ATGCCAACTG TGGAGGGTCT 
    TCTGGCAATG CCAAATCTGG GATGGAAGAA GTTCTATTTG ATGAGGTACT TGATGCTTTC 
    ATGGCAATAA GGAAGCTATT GAACCTCCAC CGAAAGAATC TTCCAGTCAA ACTCCGCTGT 
    CATGGCATTC CTCGCCCCAA ATTGGGACCT TTCAAAAAGT CGGATCCCGA GACACCCTTT 
    ATTGATTTGG GCGATACTTT AATGTGTGTT TGTCGGGGTT GTCAGGGCTT TGTGCTCATG 
    GGATGCTCGC CTTGTGTGGC TGCAGAGAGA TCGGCATCCT CGGCAAGGAT GCATGCCAAT 
    CAAAGTGAAG ATGACGACGA TGAGTTTGAA CGGGAACTTG GACAATTGGA CGATTTCAAC 
    CTGGACGACG ATGCTTTGTT GAGTCTGCTT TCTCGCATCG TTCAGAATTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002295492.1
    CDS3..2693
    Translation

    Target ORF information:

    RefSeq Version XM_002295456.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002295456.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    ATGAGCACCG ACGACAACAA CATCATGCCA GAAGACTGGC AGAATAATCC ACCTCCCCTG 
    CCACAGGACA ATTGGCAGAA TAATGAGCAG ACAAGCAACT ACGACAACGG CAACAGCAAT 
    GGAGGGCAGT ACAGCACGCA TCATCAACAA CAACCACCGC AGGAGCAGGT GAACCGTGCT 
    CAATCGTCGT ACAACAATCA ATACAGCACC TCCCAATACA ACTCCAACCA ACAACAAGAA 
    CAACACTACC AACAGCAGCA GCAACAACAG CAGCTTCAAC TATGCGCCTC GTGCGATCGA 
    TGCCGCGCTC GAAAAACGAA ATGCGATGGA GAACGACCGT GTGGGAACTG TGTCAATAAG 
    CTCAAGAAGA AGTTGAAGCT TGACAACGTG GACGGAATCG ACATTGCCGA ATTCGACTGT 
    GTTTACTCCC CCGCCAAACG ACGTGGCCCC ATCCCCGGTA AGACGGGGCA GTCTCGTAAA 
    TCGAGTGAAA TGATGTATCA GCAGCCGCAG CAGAGGGGAG GAGGATATCT CGGTAGTGGG 
    GGGGGAGGAG GATACCCCCA GCAGCAGCAT GGTCTGCAAG GGGGAGGGTA TAATTTTGGG 
    GGAGGACAGC AGCAGCAACA ACAACAACAG TGGATCAACA GCAACAACAA CCAAGGAAGT 
    CAATTCTCCT CCGAAGAATT GAAACAAATG CTATCACTCC AACAGCAGCT TCTCATTCAA 
    CAGCAGCAAA TGCAGCAACA GCAACAACAG CAGGGGATGC TTCAACAGTT GGCTACTGTG 
    ACGAGTGGTG TTGGAAGTAG TGGTATTGGA GGGGCAGGTG GTATTGGAGG AATGGGGAAC 
    ACCAACAATG TCCAGGTGGA AAATGGAGCA TTGCAGCTTC TTCAGCAGTA TCAACAGCAG 
    TTGAACAGTG GAAACAACAC GCTGGGTAGT AGTGGAAGCA TCAACATGGG ACTGGGATCT 
    CAACCCTCTC CCATGCCGTC ATCCTCCTAC AATCAAGAAC AACAACAGCA ACCTACCAAA 
    CGTGCCCATC GCCTTGAGCC TGTACTATCC AACGCCAACT CCACCAATCT CCCCAACTCG 
    GTCGCCTCAC ACCTCCCCCT CCTCTCCCTC CACAACCCCG ACGGCAACGT CCTCCGCTCC 
    TACTACCAAC TCAGCGTCAA CGATCTCCTC AACCTCCCCC CCATCCCCAG CGACGAAGAC 
    TACTGCACCA TCCTCTCTCA AAATAACTAC AACTGCCTCC CGAGCAATCT TCCCACCTAC 
    GACCAATCGG CATTGCAAGC GGCGCGGTTT GCAGAGTTGG CATTGGGAGC GTTGGCGAAC 
    AATCAGGTTC CGTTGGCTTT GGAGTTGAGT AATGCTTCGG TAATGTGTAT GAGAAATTGT 
    GTGGAGGAGC CGAGTCACAA GAGTTGTATC TATGATGTGG CGAGGGCGTA TTTGTTGCAT 
    GGGATATTTA GGAGTTTTAG GGGAGACTTT GTGAGGTATT TCAAGTATCG CAGGGTATGC 
    ATGAGTCATC TTTCGCAGTT GAATAACGAA CCCAACGTGG AAGCTCTCCT CGCTGCCATT 
    TCCTATCACG ATGCCCTCGC ATACATGATG CACAACGCAA GTGAAGATGC CCTCCCCGAC 
    ATTGACGAAG TATTGCCTCG TCTCAACGAC TGCGGTAAGA ACGATTCTGG CTGTGACATT 
    GAGGCCAAGT ACGGCATTTC CACCAATGCT TCGTCCGTTG TAACAAACGC CAACAACCAA 
    ATGTGGATGC AGGGTGCTCC TCCCGTCTTC TTGAACAATG AAGCCAGTCT CGTCAATCGT 
    TCGTTAGATG CCTTGGCTTG CGCTGTCCGT TCGTGCTGTG ATCAAGCCAA TTCCAGCTTT 
    GAGGAGATGG CGAAGGAAGC AGGAGTTGAT TTGCCTGCAG GGGGAGGATC TTGTGGAACG 
    AGTGCTACCA CGCAAGCTGT GATGGCGAAT GAAAACGAGT TGTGCAGTCG CAACATTGTG 
    CTTTCGGCTC AGACTCTTCT CAGTCAGCAT GCGGGCACGA GTCACGAGAA GAGTAAGAAG 
    CATGGGCTTG TCATGGTAGC TACGGCAATG GAAGCCTTTT TGGAGAATGG GGGAGGAGAT 
    GAGGAAGGAA TGGGAGGTTT CACCGACAAG CAGATTAAGA ACTTGTTGGC TGTGTGTAAT 
    ACGATTGTCA AGAATCCGTT GCTACTCTTT GCGCCTGGAC CGACGTATCA TATGGTTAGC 
    AACGTGGCGA TTTTGTTGTG CCATCTGTTG AATGGAATAC ATGCCAACTG TGGAGGGTCT 
    TCTGGCAATG CCAAATCTGG GATGGAAGAA GTTCTATTTG ATGAGGTACT TGATGCTTTC 
    ATGGCAATAA GGAAGCTATT GAACCTCCAC CGAAAGAATC TTCCAGTCAA ACTCCGCTGT 
    CATGGCATTC CTCGCCCCAA ATTGGGACCT TTCAAAAAGT CGGATCCCGA GACACCCTTT 
    ATTGATTTGG GCGATACTTT AATGTGTGTT TGTCGGGGTT GTCAGGGCTT TGTGCTCATG 
    GGATGCTCGC CTTGTGTGGC TGCAGAGAGA TCGGCATCCT CGGCAAGGAT GCATGCCAAT 
    CAAAGTGAAG ATGACGACGA TGAGTTTGAA CGGGAACTTG GACAATTGGA CGATTTCAAC 
    CTGGACGACG ATGCTTTGTT GAGTCTGCTT TCTCGCATCG TTCAGAATTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kr?ger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-J?z?quel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kr?ger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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