ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPS_11054 cDNA ORF clone

THAPS_11054 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPS_11054 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPS_11054 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf09087 XM_002295460.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPS_11054 ( XM_002295460.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002295496.1 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OTf09087
    Clone ID Related Accession (Same CDS sequence) XM_002295460.1
    Accession Version XM_002295460.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1128bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-15
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012081). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGCCACGAC TACAACGCCT CATCGCATCC ACTCTCCTCA CACTTATCCT CTCTGCATGG 
    AATCTGCCAT CCATCAACGC CAGCAACGTG GACAACGGAG ACTATTCCAT CAACTACTGG 
    ACCGACTACG CAATCTACCC CAAGCGATGC ATCACCTACA ACAACAACGA TCAAATCATG 
    TACAGCATTT ACGAAAAGAG CTATAATCAC TGCTCTGATT CTCCATTGGG AACCTACATC 
    ACGTCCGTCC CTACCTACGT CAATGCCTAC TTGGAGCAAA TGCAGGAGAA TGCTGATGAT 
    GCAGGCAAGG ACTACGAAGC GCCCGGCATG GCCGATTACG TCGGATGTTC CTACAAACAA 
    CTCAATGGCA AAGATTACTA TCTTCAAGTC GGATGCAGTG ATACCGATCC ATACTCACTT 
    GCCGTCAATA TCTACAGCGA TGCACAATGT ACCACTCCTT CCTCCGTCAA CGGATACGAC 
    GACTCAAACA TACCATCCGA TCTATCATTA GGATTCCAAA AATGCACTCC CTGTGTTATC 
    TGGATGGACA AGAACGACGA TGAGATTGAC GATGGATACT ACGAGTACAA ACAGACGAAT 
    GCTCCATTGT GCAGTGCCAG TTGGGAGTAT AAGGAGACGT GTGATGGAAA GTGTCAGTTG 
    ATGGCGAAGG AGGTCAAGAC TCGGGAGGGG TGGAATAAGG CGGATAAAGT CTTGTTGAGT 
    ATTCTTAGTC TTTTCGGCTT TGCAATGCTC CTCGCCATCA TTAAGAAACG ATCAAAGATG 
    TCCAACAAAG ATGCACTCCT CGAACAAGCA GCCATCTCCG CAGCAGGCCT TCAACAAACG 
    CACATCATTG GAATGTTTTG CCTTCTCATC CTAATCATTC TCATGTTTGC ACTCGTTGGA 
    CTCAAAAAGA TCACGTGGGC ACTATTGCTC ATACTCAACA TTGTTCTATT TGCGTATCTG 
    ATGAAGTTGA CTGTCGATGG ATCAGTTAAG GAGACGATTA TTGGTCCCGA TGGAAAGATT 
    GTCGAGCAGG CTGATTCAGA TGACGAGGAG GAATATGAAG TGGAGAGTGC GGCGGCTAGT 
    GGGCGTGGGG GGGCGTATGA AAATCCAGAT CTTCCCCAAA TCTCGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002295496.1
    CDS1..1128
    Translation

    Target ORF information:

    RefSeq Version XM_002295460.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002295460.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGCCACGAC TACAACGCCT CATCGCATCC ACTCTCCTCA CACTTATCCT CTCTGCATGG 
    AATCTGCCAT CCATCAACGC CAGCAACGTG GACAACGGAG ACTATTCCAT CAACTACTGG 
    ACCGACTACG CAATCTACCC CAAGCGATGC ATCACCTACA ACAACAACGA TCAAATCATG 
    TACAGCATTT ACGAAAAGAG CTATAATCAC TGCTCTGATT CTCCATTGGG AACCTACATC 
    ACGTCCGTCC CTACCTACGT CAATGCCTAC TTGGAGCAAA TGCAGGAGAA TGCTGATGAT 
    GCAGGCAAGG ACTACGAAGC GCCCGGCATG GCCGATTACG TCGGATGTTC CTACAAACAA 
    CTCAATGGCA AAGATTACTA TCTTCAAGTC GGATGCAGTG ATACCGATCC ATACTCACTT 
    GCCGTCAATA TCTACAGCGA TGCACAATGT ACCACTCCTT CCTCCGTCAA CGGATACGAC 
    GACTCAAACA TACCATCCGA TCTATCATTA GGATTCCAAA AATGCACTCC CTGTGTTATC 
    TGGATGGACA AGAACGACGA TGAGATTGAC GATGGATACT ACGAGTACAA ACAGACGAAT 
    GCTCCATTGT GCAGTGCCAG TTGGGAGTAT AAGGAGACGT GTGATGGAAA GTGTCAGTTG 
    ATGGCGAAGG AGGTCAAGAC TCGGGAGGGG TGGAATAAGG CGGATAAAGT CTTGTTGAGT 
    ATTCTTAGTC TTTTCGGCTT TGCAATGCTC CTCGCCATCA TTAAGAAACG ATCAAAGATG 
    TCCAACAAAG ATGCACTCCT CGAACAAGCA GCCATCTCCG CAGCAGGCCT TCAACAAACG 
    CACATCATTG GAATGTTTTG CCTTCTCATC CTAATCATTC TCATGTTTGC ACTCGTTGGA 
    CTCAAAAAGA TCACGTGGGC ACTATTGCTC ATACTCAACA TTGTTCTATT TGCGTATCTG 
    ATGAAGTTGA CTGTCGATGG ATCAGTTAAG GAGACGATTA TTGGTCCCGA TGGAAAGATT 
    GTCGAGCAGG CTGATTCAGA TGACGAGGAG GAATATGAAG TGGAGAGTGC GGCGGCTAGT 
    GGGCGTGGGG GGGCGTATGA AAATCCAGAT CTTCCCCAAA TCTCGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kr?ger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-J?z?quel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kr?ger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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