ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPS_25330 cDNA ORF clone

THAPS_25330 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPS_25330 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPS_25330 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf09105 XM_002295487.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPS_25330 ( XM_002295487.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002295523.1 Thalassiosira pseudonana CCMP1335 predicted protein mRNA.
    Price & Availability↑
    CloneID OTf09105
    Clone ID Related Accession (Same CDS sequence) XM_002295487.1
    Accession Version XM_002295487.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1923bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-15
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012081). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    ATGGGTCGCA AACGAATGCG AATGAGACGA GACCCTCATA CATTCCAAGA TGGATTGAAT 
    CAGGGACATC ATTCGCAGCC AGGTGTAACG ATCGATGGTA AAGTGGTGAA CATTCGCCAG 
    ATTAGTCCAA GTGATGAGGG CGTTCTGTAT ACGATGCAGA TTGGGGAAGG GGGTGTCGTG 
    CTGTGCTACA CTACGGGGCT TTCTGGAAAT GAACGAAAGA AGCCACGAAG TTCTCTCACC 
    CAAAAAACAG GCATATTCAA TCTCTTCTCG CGAAGAATGC CCAAAATCAA AGCCCAAGTA 
    CGAACAGTCA GCGAGGCAAA TGAAGAGAAT GCTCCTCCTG AGAGTGATAC TCTTCGGGGA 
    GTGAGGTCGA AGGGTGGAAA TCGCCATCCG ACACAATTCC GAATTGCGAA GAAGACGAAA 
    TACGTGAGTT CCTTGTTGGG TATCTGTTCA TCCTTTCCAT TTCAACGCAG GAAAACTGAT 
    CTCTGTGCTG TCGACATCAC TTTTCAGAAC AACTGCCTAC TCAATTGGAT CGACTCCCAT 
    GATCTCAACT TTTGCAAGAA CTTGGCTCAC ACAACCGACG TTGATAATCA TCTCTACCAA 
    CCCTCTAACC GCTTATACCG ATATATCAAC TGGACGTTCC ACGCGGGGTT CGCTGCAGTC 
    TTCATGTCCT TTCTCTTTAT CTACTTCTTT CTCGTCATTC TTTTTGGGGG TTTCCTGTAT 
    GCAGCTGGAG TGGATGACCC AGAGTGTATC ATGAGCTCAG GTGAACACTT CGGGGCGAAT 
    CCCAAAACCA TGTTCAATGA TGCCTTTGCG TTGAGCTGGA CAACTTTTAC AACCGTTGGT 
    TATGGCATGA GCTACACGAG TACTGCGAAC GATCTTGTGG ATTCCACTGG AGCAACGAAA 
    GCACATGAGT GCGCATATGT TGTACTCATT TGCAACACCG AAGCATTCCT TGGGCTGTTG 
    TTTGCAGGCA TGTGCGCTGC GATTCTGTTT GGCAAGATCA ACAGAGTTCA ATCCCATGCA 
    AAGATTGTCT TTGCAAATGC AGTTTGTTTG CAGTATGAAG AAGTTGGCGT TGAGGGAGAA 
    GTGGACGAGG ACGACAATGA AACAGAAGAG AATGAAGAGG AGGAGGAGTT GGAAGATGTC 
    GAGGAAGAGA AGTCTGATCC TGATATTGCA ACCGTACCAC AAGACCAAGA TATCGAGAAC 
    CAAGTTACCA CTACTGATCA AACGAAAGTG CAACAATTCA CGGAGCAATT TAACGGATGT 
    CCAGTACTCA AGTTCCAAGT AGTAAACGAG ATGTGCAACA GAGAAGGGAG TGAGATCGTT 
    GATGCGATCA TGAAGGTGAT CGGAATCAAG TTCAAAGGAA GTGGTGGCAG AATAACACGT 
    TCTGAGTACG TCAGAGTGAA TCTAGTTGAC TTTGAGCATC CTTTCTTCAG TAGAGTATGG 
    CACGGAGTTC ATATACTTGA TGCAACATCT CCCTTGCTGA AGGTTGACGC GAAGCAACAA 
    ATCAAAAAAA ACAGAGGGAG CTGGCCGGCT GATTGGTTTG ACCCGGAGAC AATCAAGGGC 
    AAGCTCGAGT TTGAGGATTT GATTGTCACG ATAGCTGGAA TCTCCAACAT ATCTGCGGTA 
    ACTGTTCATG CCTACAAACG ATACAAAATT GGTGACGTTC TGATTGGATT CAACTTTGCA 
    CCCCTCGTCT TTAGGAACGA AGATACTGAA AAGTTGGAGG TGGATATGTC ATTGTGTCAT 
    GATGTACGAG AGCAGCAAGG TGGAGGTGGT GAAGACTTGA TGGATGAAAG AAAGAGGTTG 
    AGGCGAGCAA ACTCTACAAT TAACATCAAG CTGGATAGCT CGACAGAGAA GTCGATGATG 
    AAATCTTTTT TTAGTCAACA TAGCCACCTT TCTTCGAACA ACGACGAGTC TCTAACTGTT 
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002295523.1
    CDS80..2002
    Translation

    Target ORF information:

    RefSeq Version XM_002295487.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002295487.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    ATGGGTCGCA AACGAATGCG AATGAGACGA GACCCTCATA CATTCCAAGA TGGATTGAAT 
    CAGGGACATC ATTCGCAGCC AGGTGTAACG ATCGATGGTA AAGTGGTGAA CATTCGCCAG 
    ATTAGTCCAA GTGATGAGGG CGTTCTGTAT ACGATGCAGA TTGGGGAAGG GGGTGTCGTG 
    CTGTGCTACA CTACGGGGCT TTCTGGAAAT GAACGAAAGA AGCCACGAAG TTCTCTCACC 
    CAAAAAACAG GCATATTCAA TCTCTTCTCG CGAAGAATGC CCAAAATCAA AGCCCAAGTA 
    CGAACAGTCA GCGAGGCAAA TGAAGAGAAT GCTCCTCCTG AGAGTGATAC TCTTCGGGGA 
    GTGAGGTCGA AGGGTGGAAA TCGCCATCCG ACACAATTCC GAATTGCGAA GAAGACGAAA 
    TACGTGAGTT CCTTGTTGGG TATCTGTTCA TCCTTTCCAT TTCAACGCAG GAAAACTGAT 
    CTCTGTGCTG TCGACATCAC TTTTCAGAAC AACTGCCTAC TCAATTGGAT CGACTCCCAT 
    GATCTCAACT TTTGCAAGAA CTTGGCTCAC ACAACCGACG TTGATAATCA TCTCTACCAA 
    CCCTCTAACC GCTTATACCG ATATATCAAC TGGACGTTCC ACGCGGGGTT CGCTGCAGTC 
    TTCATGTCCT TTCTCTTTAT CTACTTCTTT CTCGTCATTC TTTTTGGGGG TTTCCTGTAT 
    GCAGCTGGAG TGGATGACCC AGAGTGTATC ATGAGCTCAG GTGAACACTT CGGGGCGAAT 
    CCCAAAACCA TGTTCAATGA TGCCTTTGCG TTGAGCTGGA CAACTTTTAC AACCGTTGGT 
    TATGGCATGA GCTACACGAG TACTGCGAAC GATCTTGTGG ATTCCACTGG AGCAACGAAA 
    GCACATGAGT GCGCATATGT TGTACTCATT TGCAACACCG AAGCATTCCT TGGGCTGTTG 
    TTTGCAGGCA TGTGCGCTGC GATTCTGTTT GGCAAGATCA ACAGAGTTCA ATCCCATGCA 
    AAGATTGTCT TTGCAAATGC AGTTTGTTTG CAGTATGAAG AAGTTGGCGT TGAGGGAGAA 
    GTGGACGAGG ACGACAATGA AACAGAAGAG AATGAAGAGG AGGAGGAGTT GGAAGATGTC 
    GAGGAAGAGA AGTCTGATCC TGATATTGCA ACCGTACCAC AAGACCAAGA TATCGAGAAC 
    CAAGTTACCA CTACTGATCA AACGAAAGTG CAACAATTCA CGGAGCAATT TAACGGATGT 
    CCAGTACTCA AGTTCCAAGT AGTAAACGAG ATGTGCAACA GAGAAGGGAG TGAGATCGTT 
    GATGCGATCA TGAAGGTGAT CGGAATCAAG TTCAAAGGAA GTGGTGGCAG AATAACACGT 
    TCTGAGTACG TCAGAGTGAA TCTAGTTGAC TTTGAGCATC CTTTCTTCAG TAGAGTATGG 
    CACGGAGTTC ATATACTTGA TGCAACATCT CCCTTGCTGA AGGTTGACGC GAAGCAACAA 
    ATCAAAAAAA ACAGAGGGAG CTGGCCGGCT GATTGGTTTG ACCCGGAGAC AATCAAGGGC 
    AAGCTCGAGT TTGAGGATTT GATTGTCACG ATAGCTGGAA TCTCCAACAT ATCTGCGGTA 
    ACTGTTCATG CCTACAAACG ATACAAAATT GGTGACGTTC TGATTGGATT CAACTTTGCA 
    CCCCTCGTCT TTAGGAACGA AGATACTGAA AAGTTGGAGG TGGATATGTC ATTGTGTCAT 
    GATGTACGAG AGCAGCAAGG TGGAGGTGGT GAAGACTTGA TGGATGAAAG AAAGAGGTTG 
    AGGCGAGCAA ACTCTACAAT TAACATCAAG CTGGATAGCT CGACAGAGAA GTCGATGATG 
    AAATCTTTTT TTAGTCAACA TAGCCACCTT TCTTCGAACA ACGACGAGTC TCTAACTGTT 
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kr?ger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-J?z?quel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kr?ger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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