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cers1 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol cers1
Entrez Gene ID 100485129
Full Name ceramide synthase 1
Synonyms lag1,lass1,uog1
General protein information
Preferred Names

ceramide synthase 1

Names

ceramide synthase 1
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_002940602.4 XP_002940648.1 ceramide synthase 1
XM_002940602.5 XP_002940648.1 ceramide synthase 1

Pathways from BioSystems


Homologies


Pan troglodytes (chimpanzee) LASS1 XP_524160.3
Homo sapiens (human) CERS1 NP_067090.1
Gallus gallus (chicken) CERS1 NP_001264694.1
Caenorhabditis elegans (roundworm) lagr-1 NP_493403.1
Danio rerio (zebrafish) cers1 XP_005161672.1
Bos taurus (cattle) CERS1 NP_001076983.1
Mus musculus (house mouse) Cers1 NP_619588.1
Rattus norvegicus (Norway rat) Cers1 NP_001037695.1
Xenopus tropicalis (tropical clawed frog) cers1 XP_002940648.1

Gene Ontology

The following cers1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cers1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa04154 XM_002940602.5
Latest version!		 Xenopus tropicalis ceramide synthase 1 (cers1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $223.30
$319.00
View Old Accession Versions >>
OXa04154 XM_002940602.4 Xenopus tropicalis ceramide synthase 1 (cers1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $258.30
$369.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa04154
Clone ID Related Accession (Same CDS sequence) XM_002940602.4 , XM_002940602.5
Accession Version XM_002940602.4 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1080bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product ceramide synthase 1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_002940602.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGGAGGCAC TGCACCCAGC ACTCCCGCCA CCCGCTGCTC CCGGATATAT GGAGCTCTTG 
CTCCGGGGTG GGGGCACATT CATGGATGCC CTAAGGGAAT GCAAGGACTG TGGATGGGAA 
CTATCCTTGG CTACCCTAAA GAAACATGCC AGCCTTACCT GGGCAGAGCT CCTATGCCTG 
CTTATAGGCG CCTTGGTATG GACTGGCCTA AGAAAGGCAA CCACAAGGTG GATCTTCCAG 
CCTTTTGCTC ATTGGTGCCT GCTGCACCCA AAAGAAGCCA GTAAAGTCCC AGAGAGTGCC 
TGGAAGCTCC TATTCTACAC CATCTCTTGG TCTTACAGCT TCTACCTCCT GTTCTTCACT 
GAATACAATT TCTTCCATGA CCCTTCTTCT TCCTTCCATG GTTGGAAGTC AGGAGTGCAG 
GTTCCCAGGG ATATTGCCAT GGCATATCTC ATACAAGGCA GTTTCTATGC ACATTCTACA 
TATGCCACCA TCTATATGGA CTCATGGAGA AAAGACTCTA TTGTCATGAT TCTGCATCAT 
GTGGTCACAT TCACTCTTAT TACTTTCTCA TATGCTTTCC GGTACCACAA CATTGGAATT 
CTTGTTCTCT TCCTTCATGA CATTAATGAC ATACAACTTG AATTCACTAA GTTAAATGTC 
TACTTTAAAA CCCGGGGTGG GAGATACCAC AGAATTAATG ACTTCATTTC TGATGTGGGC 
TGTGTAACAT TCAGCATGAG CTGGTTCTGG TTCCGATTGT TCTGGTTTCC TCAGAAAGTT 
CTCTATGCTA CTTGTTATTC AAGCCTCGAG TCCGATCCAA ATATCCCCTT TTATTTCTTT 
TTTAACAGTC TGCTGTTTGT GCTGACACTG ATGAATATAT ATTGGTTTTT GTACATTGTG 
ATGTTTGTCG TGAAAGTGTT AACAGGACAA GTGAAAGAAG TCAATGATGT AAGAGAATAT 
GATGTTAGTG AGAATCAAAA GTTGGAAGTC CCTGCAAAAA ACAACAACAC CCGGCACAGG 
GACGCTCTTA GCAATGGGCA ATCGATCTTG AATGGATGTG TAAAGAAAAA GAGGATGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_002940648.1
CDS717..1796
Translation

Target ORF information:

RefSeq Version XM_002940602.4
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis ceramide synthase 1 (cers1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_002940602.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGGAGGCAC TGCACCCAGC ACTCCCGCCA CCCGCTGCTC CCGGATATAT GGAGCTCTTG 
CTCCGGGGTG GGGGCACATT CATGGATGCC CTAAGGGAAT GCAAGGACTG TGGATGGGAA 
CTATCCTTGG CTACCCTAAA GAAACATGCC AGCCTTACCT GGGCAGAGCT CCTATGCCTG 
CTTATAGGCG CCTTGGTATG GACTGGCCTA AGAAAGGCAA CCACAAGGTG GATCTTCCAG 
CCTTTTGCTC ATTGGTGCCT GCTGCACCCA AAAGAAGCCA GTAAAGTCCC AGAGAGTGCC 
TGGAAGCTCC TATTCTACAC CATCTCTTGG TCTTACAGCT TCTACCTCCT GTTCTTCACT 
GAATACAATT TCTTCCATGA CCCTTCTTCT TCCTTCCATG GTTGGAAGTC AGGAGTGCAG 
GTTCCCAGGG ATATTGCCAT GGCATATCTC ATACAAGGCA GTTTCTATGC ACATTCTACA 
TATGCCACCA TCTATATGGA CTCATGGAGA AAAGACTCTA TTGTCATGAT TCTGCATCAT 
GTGGTCACAT TCACTCTTAT TACTTTCTCA TATGCTTTCC GGTACCACAA CATTGGAATT 
CTTGTTCTCT TCCTTCATGA CATTAATGAC ATACAACTTG AATTCACTAA GTTAAATGTC 
TACTTTAAAA CCCGGGGTGG GAGATACCAC AGAATTAATG ACTTCATTTC TGATGTGGGC 
TGTGTAACAT TCAGCATGAG CTGGTTCTGG TTCCGATTGT TCTGGTTTCC TCAGAAAGTT 
CTCTATGCTA CTTGTTATTC AAGCCTCGAG TCCGATCCAA ATATCCCCTT TTATTTCTTT 
TTTAACAGTC TGCTGTTTGT GCTGACACTG ATGAATATAT ATTGGTTTTT GTACATTGTG 
ATGTTTGTCG TGAAAGTGTT AACAGGACAA GTGAAAGAAG TCAATGATGT AAGAGAATAT 
GATGTTAGTG AGAATCAAAA GTTGGAAGTC CCTGCAAAAA ACAACAACAC CCGGCACAGG 
GACGCTCTTA GCAATGGGCA ATCGATCTTG AATGGATGTG TAAAGAAAAA GAGGATGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa04154
Clone ID Related Accession (Same CDS sequence) XM_002940602.4 , XM_002940602.5
Accession Version XM_002940602.5 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1080bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product ceramide synthase 1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_002940602.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGGAGGCAC TGCACCCAGC ACTCCCGCCA CCCGCTGCTC CCGGATATAT GGAGCTCTTG 
CTCCGGGGTG GGGGCACATT CATGGATGCC CTAAGGGAAT GCAAGGACTG TGGATGGGAA 
CTATCCTTGG CTACCCTAAA GAAACATGCC AGCCTTACCT GGGCAGAGCT CCTATGCCTG 
CTTATAGGCG CCTTGGTATG GACTGGCCTA AGAAAGGCAA CCACAAGGTG GATCTTCCAG 
CCTTTTGCTC ATTGGTGCCT GCTGCACCCA AAAGAAGCCA GTAAAGTCCC AGAGAGTGCC 
TGGAAGCTCC TATTCTACAC CATCTCTTGG TCTTACAGCT TCTACCTCCT GTTCTTCACT 
GAATACAATT TCTTCCATGA CCCTTCTTCT TCCTTCCATG GTTGGAAGTC AGGAGTGCAG 
GTTCCCAGGG ATATTGCCAT GGCATATCTC ATACAAGGCA GTTTCTATGC ACATTCTACA 
TATGCCACCA TCTATATGGA CTCATGGAGA AAAGACTCTA TTGTCATGAT TCTGCATCAT 
GTGGTCACAT TCACTCTTAT TACTTTCTCA TATGCTTTCC GGTACCACAA CATTGGAATT 
CTTGTTCTCT TCCTTCATGA CATTAATGAC ATACAACTTG AATTCACTAA GTTAAATGTC 
TACTTTAAAA CCCGGGGTGG GAGATACCAC AGAATTAATG ACTTCATTTC TGATGTGGGC 
TGTGTAACAT TCAGCATGAG CTGGTTCTGG TTCCGATTGT TCTGGTTTCC TCAGAAAGTT 
CTCTATGCTA CTTGTTATTC AAGCCTCGAG TCCGATCCAA ATATCCCCTT TTATTTCTTT 
TTTAACAGTC TGCTGTTTGT GCTGACACTG ATGAATATAT ATTGGTTTTT GTACATTGTG 
ATGTTTGTCG TGAAAGTGTT AACAGGACAA GTGAAAGAAG TCAATGATGT AAGAGAATAT 
GATGTTAGTG AGAATCAAAA GTTGGAAGTC CCTGCAAAAA ACAACAACAC CCGGCACAGG 
GACGCTCTTA GCAATGGGCA ATCGATCTTG AATGGATGTG TAAAGAAAAA GAGGATGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_002940648.1
CDS671..1750
Translation

Target ORF information:

RefSeq Version XM_002940602.5
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis ceramide synthase 1 (cers1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_002940602.5

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
ATGGAGGCAC TGCACCCAGC ACTCCCGCCA CCCGCTGCTC CCGGATATAT GGAGCTCTTG 
CTCCGGGGTG GGGGCACATT CATGGATGCC CTAAGGGAAT GCAAGGACTG TGGATGGGAA 
CTATCCTTGG CTACCCTAAA GAAACATGCC AGCCTTACCT GGGCAGAGCT CCTATGCCTG 
CTTATAGGCG CCTTGGTATG GACTGGCCTA AGAAAGGCAA CCACAAGGTG GATCTTCCAG 
CCTTTTGCTC ATTGGTGCCT GCTGCACCCA AAAGAAGCCA GTAAAGTCCC AGAGAGTGCC 
TGGAAGCTCC TATTCTACAC CATCTCTTGG TCTTACAGCT TCTACCTCCT GTTCTTCACT 
GAATACAATT TCTTCCATGA CCCTTCTTCT TCCTTCCATG GTTGGAAGTC AGGAGTGCAG 
GTTCCCAGGG ATATTGCCAT GGCATATCTC ATACAAGGCA GTTTCTATGC ACATTCTACA 
TATGCCACCA TCTATATGGA CTCATGGAGA AAAGACTCTA TTGTCATGAT TCTGCATCAT 
GTGGTCACAT TCACTCTTAT TACTTTCTCA TATGCTTTCC GGTACCACAA CATTGGAATT 
CTTGTTCTCT TCCTTCATGA CATTAATGAC ATACAACTTG AATTCACTAA GTTAAATGTC 
TACTTTAAAA CCCGGGGTGG GAGATACCAC AGAATTAATG ACTTCATTTC TGATGTGGGC 
TGTGTAACAT TCAGCATGAG CTGGTTCTGG TTCCGATTGT TCTGGTTTCC TCAGAAAGTT 
CTCTATGCTA CTTGTTATTC AAGCCTCGAG TCCGATCCAA ATATCCCCTT TTATTTCTTT 
TTTAACAGTC TGCTGTTTGT GCTGACACTG ATGAATATAT ATTGGTTTTT GTACATTGTG 
ATGTTTGTCG TGAAAGTGTT AACAGGACAA GTGAAAGAAG TCAATGATGT AAGAGAATAT 
GATGTTAGTG AGAATCAAAA GTTGGAAGTC CCTGCAAAAA ACAACAACAC CCGGCACAGG 
GACGCTCTTA GCAATGGGCA ATCGATCTTG AATGGATGTG TAAAGAAAAA GAGGATGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed