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cycs cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol cycs
Entrez Gene ID 394490
Full Name cytochrome c, somatic
Synonyms cyc,cyct,hcs
General protein information
Preferred Names

cytochrome c, somatic

Names

cytochrome c, testis-specific
cytochrome c, testis
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_012964419.2 XP_012819873.1 cytochrome c, testis-specific isoform X1
NM_203564.1 NP_988895.1 cytochrome c, testis-specific
XM_012964419.3 XP_012819873.1 cytochrome c, testis-specific isoform X1

Pathways from BioSystems


Homologies


Bos taurus (cattle) CYCS NP_001039526.1
Rattus norvegicus (Norway rat) Cycs NP_036971.1
Drosophila melanogaster (fruit fly) Cyt-c-p NP_477176.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP009537 XP_310154.1
Eremothecium gossypii AGOS_AFR360W NP_985907.1
Rattus norvegicus (Norway rat) LOC100363502 XP_003751847.1
Gallus gallus (chicken) CYCS NP_001072946.1
Homo sapiens (human) CYCS NP_061820.1
Caenorhabditis elegans (roundworm) cyc-2.2 NP_506156.1
Kluyveromyces lactis KLLA0F16929g XP_455841.1
Xenopus tropicalis (tropical clawed frog) cycs NP_988895.1
LOC694977 XP_001085135.1
Canis lupus familiaris (dog) CYCS NP_001183974.1
Mus musculus (house mouse) Cycs NP_031834.1
Caenorhabditis elegans (roundworm) cyc-2.1 NP_500629.1
Saccharomyces cerevisiae (baker's yeast) CYC1 NP_012582.1

Gene Ontology


Bibliography

Related articles in PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following cycs gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cycs cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa00280 NM_203564.1
Latest version!		 Xenopus tropicalis cytochrome c, somatic (cycs), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $104.30
$149.00
OXa25875 XM_012964419.3
Latest version!		 Xenopus tropicalis cytochrome c, somatic (cycs), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $69.30
$99.00
View Old Accession Versions >>
OXa25875 XM_012964419.2 Xenopus tropicalis cytochrome c, somatic (cycs), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $104.30
$149.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa00280
Clone ID Related Accession (Same CDS sequence) NM_203564.1
Accession Version NM_203564.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 318bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-25
Organism Xenopus tropicalis(tropical clawed frog)
Product cytochrome c, testis-specific
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059740.1. ##Evidence-Data-START## Transcript exon combination :: BC059740.1, CX506288.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## 

1
61
121
181
241
301
ATGGGAGACG CTGAAAAAGG CAAGAAAATC TTTGTTCAGA AATGTTCCCA GTGCCACACT 
GTAGAGAAAG GAGGCAAGCA CAAAACTGGG CCTAACCTTC ACGGCCTGTT TGGACGCAAG 
ACTGGACAAG CAGAAGGCTT TTCCTATACT GATGCTAACA AAAATAAGGG AATTGTTTGG 
GATGAGGGTA CCCTTCTGGA ATATCTAGAA AATCCTAAGA AGTACATTCC TGGAACAAAG 
ATGATCTTTG CTGGCATTAA GAAGAAGGGC GAGAGACAAG ACTTAATAGC ATATCTAAAA 
CAGTCAACCA GCAGTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_988895.1
CDS174..491
Translation

Target ORF information:

RefSeq Version NM_203564.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis cytochrome c, somatic (cycs), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_203564.1

ORF Insert Sequence:

1
61
121
181
241
301
ATGGGAGACG CTGAAAAAGG CAAGAAAATC TTTGTTCAGA AATGTTCCCA GTGCCACACT 
GTAGAGAAAG GAGGCAAGCA CAAAACTGGG CCTAACCTTC ACGGCCTGTT TGGACGCAAG 
ACTGGACAAG CAGAAGGCTT TTCCTATACT GATGCTAACA AAAATAAGGG AATTGTTTGG 
GATGAGGGTA CCCTTCTGGA ATATCTAGAA AATCCTAAGA AGTACATTCC TGGAACAAAG 
ATGATCTTTG CTGGCATTAA GAAGAAGGGC GAGAGACAAG ACTTAATAGC ATATCTAAAA 
CAGTCAACCA GCAGTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa25875
Clone ID Related Accession (Same CDS sequence) XM_012964419.2 , XM_012964419.3
Accession Version XM_012964419.2 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 318bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product cytochrome c, testis-specific isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030682.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012964419.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
ATGGGAGACG CTGAAAAAGG CAAGAAAATC TTTGTTCAGA AATGTTCCCA GTGCCACACT 
GTAGAGAAAG GAGGCAAGCA CAAAACTGGG CCTAACCTTC ATGGCCTGTT TGGACGCAAG 
ACTGGACAAG CAGAAGGCTT TTCCTATACT GATGCTAACA AAAATAAGGG AATTGTTTGG 
GATGAGGGTA CCCTTCTGGA ATATCTAGAA AATCCTAAGA AGTACATTCC TGGAACAAAG 
ATGATCTTTG CTGGCATTAA GAAGAAGGGC GAGAGACAAG ACTTAATAGC ATATCTAAAA 
CAGTCAACCA GCAGTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012819873.1
CDS280..597
Translation

Target ORF information:

RefSeq Version XM_012964419.2
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis cytochrome c, somatic (cycs), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012964419.2

ORF Insert Sequence:

1
61
121
181
241
301
ATGGGAGACG CTGAAAAAGG CAAGAAAATC TTTGTTCAGA AATGTTCCCA GTGCCACACT 
GTAGAGAAAG GAGGCAAGCA CAAAACTGGG CCTAACCTTC ATGGCCTGTT TGGACGCAAG 
ACTGGACAAG CAGAAGGCTT TTCCTATACT GATGCTAACA AAAATAAGGG AATTGTTTGG 
GATGAGGGTA CCCTTCTGGA ATATCTAGAA AATCCTAAGA AGTACATTCC TGGAACAAAG 
ATGATCTTTG CTGGCATTAA GAAGAAGGGC GAGAGACAAG ACTTAATAGC ATATCTAAAA 
CAGTCAACCA GCAGTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa25875
Clone ID Related Accession (Same CDS sequence) XM_012964419.2 , XM_012964419.3
Accession Version XM_012964419.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 318bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product cytochrome c, testis-specific isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030682.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012964419.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
ATGGGAGACG CTGAAAAAGG CAAGAAAATC TTTGTTCAGA AATGTTCCCA GTGCCACACT 
GTAGAGAAAG GAGGCAAGCA CAAAACTGGG CCTAACCTTC ATGGCCTGTT TGGACGCAAG 
ACTGGACAAG CAGAAGGCTT TTCCTATACT GATGCTAACA AAAATAAGGG AATTGTTTGG 
GATGAGGGTA CCCTTCTGGA ATATCTAGAA AATCCTAAGA AGTACATTCC TGGAACAAAG 
ATGATCTTTG CTGGCATTAA GAAGAAGGGC GAGAGACAAG ACTTAATAGC ATATCTAAAA 
CAGTCAACCA GCAGTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_012819873.1
CDS266..583
Translation

Target ORF information:

RefSeq Version XM_012964419.3
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis cytochrome c, somatic (cycs), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_012964419.3

ORF Insert Sequence:

1
61
121
181
241
301
ATGGGAGACG CTGAAAAAGG CAAGAAAATC TTTGTTCAGA AATGTTCCCA GTGCCACACT 
GTAGAGAAAG GAGGCAAGCA CAAAACTGGG CCTAACCTTC ATGGCCTGTT TGGACGCAAG 
ACTGGACAAG CAGAAGGCTT TTCCTATACT GATGCTAACA AAAATAAGGG AATTGTTTGG 
GATGAGGGTA CCCTTCTGGA ATATCTAGAA AATCCTAAGA AGTACATTCC TGGAACAAAG 
ATGATCTTTG CTGGCATTAA GAAGAAGGGC GAGAGACAAG ACTTAATAGC ATATCTAAAA 
CAGTCAACCA GCAGTTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P