LOC105339540 cDNA ORF clone, Crassostrea gigas(Pacific oyster)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105339540
Entrez Gene ID	105339540
Full Name	probable beta-D-xylosidase 5
Gene Type	protein-coding
Organism	Crassostrea gigas(Pacific oyster)

mRNA and Protein(s)

mRNA	Protein	Name
XM_011445114.2	XP_011443416.1	probable beta-D-xylosidase 5

Pathways from BioSystems
Gene Ontology

The following LOC105339540 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105339540 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCr105936	XM_011445114.2 Latest version!	Crassostrea gigas probable beta-D-xylosidase 5 (LOC105339540), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105339540 ( XM_011445114.2 ) cDNA ORF clone, Crassostrea gigas(Pacific oyster) -> XP_011443416.1 Crassostrea gigas probable beta-D-xylosidase 5 (LOC105339540), mRNA.

Price & Availability↑

CloneID	OCr105936
Clone ID Related Accession (Same CDS sequence)	XM_011445114.2
Accession Version	XM_011445114.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2247bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-02-01
Organism	Crassostrea gigas(Pacific oyster)
Product	probable beta-D-xylosidase 5
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_011936383.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 2, 2017 this sequence version replaced XM_011445114.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Crassostrea gigas Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTTAACAG ATAAAGTGTG TGTCGTATGC ATCTATTTAT TCGCGTTGAC ACCGTTGGCC 
AGCTCTAATT TTCCATTCCA AAATGTTTCC TTGTCGTGGT CCGAGAGGGT TGATGATTTG 
GTTGGGAGGT TGACTCTAGA TCAGATTGTG CAGCAACTCG CGCGTGGAGG TGCCGGATTG 
AATGGGGGAC CTGCGCCTGC TATCGAGAAC CTAGGCATAG GGCCTTACCA GTGGAATACG 
GAATGCTTGA GAGGAGACGT GGAAGCAGGG AATGCCACAT CGTTCCCCCA GGCGATTGGA 
CTTGCAGCAG CATTTAGTAA AGATCTGATC TTCAATGTCT CCAAAGCTGC TGCCACAGAA 
GTCAGAGCCA AGCACAATGA TTTTGTGAAG CGAGGGATCT TCACAGACCA CACAGGACTC 
AGCTGTTTTA GCCCTGTTGT CAACATCATG AGACACCCAC TCTGGGGCAG AAATCAGGAA 
ACCTATGGGG AAGACCCCTA CCTGTCTGGG ACCTATGCCA GCTACTTTGT TCAGGGACTG 
CAGGGGGACC ACGACAGATA CATACAGGCC AACGCCGGGT GTAAACACTT CGATGCCCAT 
GGCGGCCCAG AGGATATCCC TGAGTCCAGA ATGGGATTTG ATGCCAAGGT GTCCATGAGA 
GATTTGAGGC TGACTTTTCT ACCAGCATTC CAGAAATGTG TCCAAGCAGG GGCGTACAGT 
CTCATGTGTA GCTACAACAG TATAAATGGA GTACCGGCCT GCAGCAATAA GCTCCTAATG 
ATGGACATAT TGAGGGGGGA GTGGAACTTC ACCGGTTACG TGGTCAGTGA TGAGGGGGCC 
ATAGAGAACC AGATCAGCTT CCACCACTAC TACAACAACT CGGAGGATGC AGCGGCAGGG 
TCCGTCAATG CCGGCTGTAA CCTGGAGCTG TCAGGAAACC TGACCGAGCC CGTGTTCATG 
AAAATTGGTG ATGCTGTAAA GAGTGGAAAA CTTGAGGAAT CAGTCGTGCG TAACCGGGTT 
AAACCCTTAT TTTATACCAG AATGAGGTTG GGAGAATTTG ATCCACCAGA GATGAATCCC 
TATTCATCTG TTAATCTGTC CGTCATCCAA AGTGAAGAGC ACAGAAACCT TTCTCTCACA 
GCAGCAGCCA AGTCTCTGGT CCTTTTGAAG CGTCCATCAA AGTTTAGTAA AAGACATCTG 
ATTGGTGGAT TTCCATCGGA GAGAATGGCG GTAATAGGTC CAATGGCAAA CAACACAGAC 
CAAATCTTTG GGGATTATTC CCCCACAACG GACCCCAGGT TTGTGAAGAC CCCCCTGAAG 
GGCCTCACTG AACTGAATTT CTCAATGAAC TATGCAGCAG GTTGCGTAGA TGGCACCAGG 
TGTTTGAATT ATTCACAGGA CGACGTAAAA ACGGCCCTCG TAGGAGCTGA CTTAGTGGTC 
GTGTGTTTGG GTACAGGCAA AGACTTGGAG AGTGAAAATG TGGACCGTAA GGACATGATG 
TTACCAGGGA AACAGCTGCA GCTTCTCCAG GATGTTGTAT CAATGACCAA CAAGGCGGTT 
TACCTGCTGG TGTTTTCGGC GGGGCCGGTC AACATCACCT GGGCTCAGGA AAGCGAGCGT 
GTGCTGATCA TCCTCCAGTG CTTCTACCCC GCCCAGTCAG CTGGGGATGC CATCACACAG 
GCGCTGATCA TGAGGGACGG GCGGTTCAAC CCCGCGGGGA GGCTTCCTTA CACCTGGTAC 
AGGTATACTG AACAGATTCC AGAGATGACT GACTACTCAA TGGCCAGGAA GACCTACCGC 
TACTTCACCG GGGTCCCCCT GTACCCCTTT GGCTACGGTC TCTCCTACTC CACGTTCGTC 
TTCAGTAAGC TGTACTTCCT CCCCAAGGTC AACGCCGGGG ACCCCAATGT TGTACAGGTC 
CGAGTCTTCA ACGAGGGGCC CTTTGATGGA GACGAGGTAC TGCAAGTCTA CATAAAATGG 
ATGTCCACCA AAGAGAGGAT GCCGCGAGTC CAGCTCGTGG CGTTCGAGCG AGTCTTCATA 
AGGAGCCAGC AGTATGTGGA TATCAGCACC GCGATCACAC CGCAGAGTAT GGCGATATGG 
AAGGACGGCA TTGGATTTGT CATCGAACCA GGCTTTATCC AATTCTACGC AGGAGGTCAA 
CAGCCAGACC AAAAGGTCAC GGTTCCGTCC AATATCTTAC AAGGCCAGTT TGAAATAGTC 
GGCAAGCAAG TTCTGTCTCC ACACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_011443416.1
CDS	115..2361
Translation	MLTDKVCVVCIYLFALTPLASSNFPFQNVSLSWSERVDDLVGRLTLDQIVQQLARGGAGLNGGPAPAIENLGIGPYQWNTECLRGDVEAGNATSFPQAIGLAAAFSKDLIFNVSKAAATEVRAKHNDFVKRGIFTDHTGLSCFSPVVNIMRHPLWGRNQETYGEDPYLSGTYASYFVQGLQGDHDRYIQANAGCKHFDAHGGPEDIPESRMGFDAKVSMRDLRLTFLPAFQKCVQAGAYSLMCSYNSINGVPACSNKLLMMDILRGEWNFTGYVVSDEGAIENQISFHHYYNNSEDAAAGSVNAGCNLELSGNLTEPVFMKIGDAVKSGKLEESVVRNRVKPLFYTRMRLGEFDPPEMNPYSSVNLSVIQSEEHRNLSLTAAAKSLVLLKRPSKFSKRHLIGGFPSERMAVIGPMANNTDQIFGDYSPTTDPRFVKTPLKGLTELNFSMNYAAGCVDGTRCLNYSQDDVKTALVGADLVVVCLGTGKDLESENVDRKDMMLPGKQLQLLQDVVSMTNKAVYLLVFSAGPVNITWAQESERVLIILQCFYPAQSAGDAITQALIMRDGRFNPAGRLPYTWYRYTEQIPEMTDYSMARKTYRYFTGVPLYPFGYGLSYSTFVFSKLYFLPKVNAGDPNVVQVRVFNEGPFDGDEVLQVYIKWMSTKERMPRVQLVAFERVFIRSQQYVDISTAITPQSMAIWKDGIGFVIEPGFIQFYAGGQQPDQKVTVPSNILQGQFEIVGKQVLSPH

Target ORF information:

RefSeq Version	XM_011445114.2
Organism	Crassostrea gigas(Pacific oyster)
Definition	Crassostrea gigas probable beta-D-xylosidase 5 (LOC105339540), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_011445114.2

ORF Insert Sequence:

ATGTTAACAG ATAAAGTGTG TGTCGTATGC ATCTATTTAT TCGCGTTGAC ACCGTTGGCC 
AGCTCTAATT TTCCATTCCA AAATGTTTCC TTGTCGTGGT CCGAGAGGGT TGATGATTTG 
GTTGGGAGGT TGACTCTAGA TCAGATTGTG CAGCAACTCG CGCGTGGAGG TGCCGGATTG 
AATGGGGGAC CTGCGCCTGC TATCGAGAAC CTAGGCATAG GGCCTTACCA GTGGAATACG 
GAATGCTTGA GAGGAGACGT GGAAGCAGGG AATGCCACAT CGTTCCCCCA GGCGATTGGA 
CTTGCAGCAG CATTTAGTAA AGATCTGATC TTCAATGTCT CCAAAGCTGC TGCCACAGAA 
GTCAGAGCCA AGCACAATGA TTTTGTGAAG CGAGGGATCT TCACAGACCA CACAGGACTC 
AGCTGTTTTA GCCCTGTTGT CAACATCATG AGACACCCAC TCTGGGGCAG AAATCAGGAA 
ACCTATGGGG AAGACCCCTA CCTGTCTGGG ACCTATGCCA GCTACTTTGT TCAGGGACTG 
CAGGGGGACC ACGACAGATA CATACAGGCC AACGCCGGGT GTAAACACTT CGATGCCCAT 
GGCGGCCCAG AGGATATCCC TGAGTCCAGA ATGGGATTTG ATGCCAAGGT GTCCATGAGA 
GATTTGAGGC TGACTTTTCT ACCAGCATTC CAGAAATGTG TCCAAGCAGG GGCGTACAGT 
CTCATGTGTA GCTACAACAG TATAAATGGA GTACCGGCCT GCAGCAATAA GCTCCTAATG 
ATGGACATAT TGAGGGGGGA GTGGAACTTC ACCGGTTACG TGGTCAGTGA TGAGGGGGCC 
ATAGAGAACC AGATCAGCTT CCACCACTAC TACAACAACT CGGAGGATGC AGCGGCAGGG 
TCCGTCAATG CCGGCTGTAA CCTGGAGCTG TCAGGAAACC TGACCGAGCC CGTGTTCATG 
AAAATTGGTG ATGCTGTAAA GAGTGGAAAA CTTGAGGAAT CAGTCGTGCG TAACCGGGTT 
AAACCCTTAT TTTATACCAG AATGAGGTTG GGAGAATTTG ATCCACCAGA GATGAATCCC 
TATTCATCTG TTAATCTGTC CGTCATCCAA AGTGAAGAGC ACAGAAACCT TTCTCTCACA 
GCAGCAGCCA AGTCTCTGGT CCTTTTGAAG CGTCCATCAA AGTTTAGTAA AAGACATCTG 
ATTGGTGGAT TTCCATCGGA GAGAATGGCG GTAATAGGTC CAATGGCAAA CAACACAGAC 
CAAATCTTTG GGGATTATTC CCCCACAACG GACCCCAGGT TTGTGAAGAC CCCCCTGAAG 
GGCCTCACTG AACTGAATTT CTCAATGAAC TATGCAGCAG GTTGCGTAGA TGGCACCAGG 
TGTTTGAATT ATTCACAGGA CGACGTAAAA ACGGCCCTCG TAGGAGCTGA CTTAGTGGTC 
GTGTGTTTGG GTACAGGCAA AGACTTGGAG AGTGAAAATG TGGACCGTAA GGACATGATG 
TTACCAGGGA AACAGCTGCA GCTTCTCCAG GATGTTGTAT CAATGACCAA CAAGGCGGTT 
TACCTGCTGG TGTTTTCGGC GGGGCCGGTC AACATCACCT GGGCTCAGGA AAGCGAGCGT 
GTGCTGATCA TCCTCCAGTG CTTCTACCCC GCCCAGTCAG CTGGGGATGC CATCACACAG 
GCGCTGATCA TGAGGGACGG GCGGTTCAAC CCCGCGGGGA GGCTTCCTTA CACCTGGTAC 
AGGTATACTG AACAGATTCC AGAGATGACT GACTACTCAA TGGCCAGGAA GACCTACCGC 
TACTTCACCG GGGTCCCCCT GTACCCCTTT GGCTACGGTC TCTCCTACTC CACGTTCGTC 
TTCAGTAAGC TGTACTTCCT CCCCAAGGTC AACGCCGGGG ACCCCAATGT TGTACAGGTC 
CGAGTCTTCA ACGAGGGGCC CTTTGATGGA GACGAGGTAC TGCAAGTCTA CATAAAATGG 
ATGTCCACCA AAGAGAGGAT GCCGCGAGTC CAGCTCGTGG CGTTCGAGCG AGTCTTCATA 
AGGAGCCAGC AGTATGTGGA TATCAGCACC GCGATCACAC CGCAGAGTAT GGCGATATGG 
AAGGACGGCA TTGGATTTGT CATCGAACCA GGCTTTATCC AATTCTACGC AGGAGGTCAA 
CAGCCAGACC AAAAGGTCAC GGTTCCGTCC AATATCTTAC AAGGCCAGTT TGAAATAGTC 
GGCAAGCAAG TTCTGTCTCC ACACTGA