LINJ_35_3820 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_35_3820
Entrez Gene ID	5073279
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001469148.1	XP_001469185.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_35_3820 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_35_3820 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc06492	XM_001469148.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_35_3820 ( XM_001469148.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001469185.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc06492
Clone ID Related Accession (Same CDS sequence)	XM_001469148.1
Accession Version	XM_001469148.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1956bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009419). COMPLETENESS: incomplete on both ends.

ATGATGCGTA CTTCTGCCGT GGTGACGACG CTCGCCGTGA CCGCGGCGCT GCTTGCCCTG 
CTCAGCGTCT CTGTCGCAGT GAGCGCGGTG AACCTGCTGC CGCTGATGGG TGAGGGATTG 
TTCGATGTCG AGGTGGTGTG CCGCAGCGCC ATGCCGAGTG AGCCGACGGT CTACGACAGA 
TCCGTGATCA GTGCATTTCG CTTCTCCGTC AATGCGAGCG CGGACGGCAC GAAAGAGAAA 
GTGCACCTCC CATTATACGT GGAGCGCATC CTAGACAGCG ACTACGTCCG TACCTACTAC 
ATCAACTCTA CCGACAAGTA CAGCATCTCC GACTCCAAGG GCTGTGTGCA CACGAAGGGG 
TTGTATGAAT CCTCGGACGA GGTGCTCTTG TCTGAGAGTC TCATTACTAT GCTGCGTTCC 
CCGCTCTCAG CGACACCCAG CCCGAGCATG ATTCGCGGTA TTGCCGCCGA TAACTACTCG 
AGCCAGTATA ACCTCACGAT TCCGAGCAGT TACGGTGGTC TTGGGTCGCC CGCCACTTAC 
CGCGCCGCTG TGTTGACGAG CACGCAGCAC TGGTTGGTGA ACTTGATGCA GGTGGACCTG 
ACGCCGGTGT CGATCGAGGT GATGACAACA GACTCCGCCA GCAAGATTAA CAACTGCCTG 
TTTACTTTCT CCTTCTTTGG CTCGAACGTG TCCGCCGTGC GGGGGTCTCT TCCGTACTCC 
TGCAAAAACT CATCCTCTGA GCACCCACGA GTCTGGAAGT CGTCGAACGT TGCTCTGCCG 
ATGATGAGAG CCCTCGCGGG CGCTGCCAAG GCCTTTTCAT CGCGGCCCAG TGTCTTCAGC 
AGCTCGAGTG AGACATCGTC ATCAACCTCA GCAGCGGACA CTGCCAACTA CACGATGCCA 
GCGTTTCCTG ATGATTTCAC AGCAAATTTC CTTGTCGTTT CGCCGCTTAA GAAGTCCTTC 
TACCAGGTTC GCGAGTCCTA CAGCCTCTAT GCGGGTTTCT CCCTCACCAG CTTGCAGTTC 
CCCCTGAAGG GTATCGCTGG TCGCGTGTAC AAGCACGAGT GGTACACCAA CTCGTGGAAT 
CAGATGTCGT ACTACCACAC CGAGTTTGCA GTGCCGAGCG GCCAGGAGAT GGCCGACGAG 
GCTCTGCGCA AGTACTTCTT CCCTGACCTG AACACCTGCA GACGCGTCGT CATTGCCTAC 
GACTTGATGG CCAGGAGCTC CAGCTCCCTG CTGCTCTACT CGCCAAATGT GCCGCCGACG 
TTTATCGGCA ACCAGACGGT GCGCAACATC CCGTGCGGGG TGTGGGTGGC GGAGATACAA 
GGCGTCCGTG TAACGTGGTA CTGGGCGACT ACTGATTTGG TGGACACGGC GTCGTTCTGG 
ACCGTCGACA GCATAGAAAG TGGCGCGTCG GCTTACACCC GGCTGGTGCG CATGACGGTG 
ACCGGCAAGG GCGGCGCCCC GCCGCTGTTC GCGCACCACC CCTTCTTCCC GCAAAGCTAC 
GCCTTCCCTG TGGATGATCG TGATGTGGCG TGCACTGCGA TGATGCCTTC TGAGGCGGAT 
ATGGGCTGCT ACAGCTACGC CAAAAACGCT GATTACACTT ACATATACGA AATCACGTCT 
TTTGTGCCGT ACGTTCGAAG GAATGACTAT CGTCTCCCTG CCGCGTGCGT CGGCGTCAAG 
ATATTGGGCT CAATCCCCAG CTTTCAGTGC AACTACAAAG GCATCACGGG CGGCGTGGCG 
TCCATACTGC TGACTGTGGT TGCGCTGCTG TTCTCCCTTG CGGGCGGGTG CTGCGTGTGG 
TGCCCCTTCT CCCGAATTGT GCGTCACCAA CAGGATGAGC TGGCGCGATT CACGTGGGAG 
ATACGTCTTG CTCAAAGCGC GAACGGCACT GAGGGGCATG ACACAACGGA CGTCGGCGCC 
AAAGGCGAAT CTGATGGCAG GAACCCTTCC TCGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001469185.1
CDS	1..1956
Translation	MMRTSAVVTTLAVTAALLALLSVSVAVSAVNLLPLMGEGLFDVEVVCRSAMPSEPTVYDRSVISAFRFSVNASADGTKEKVHLPLYVERILDSDYVRTYYINSTDKYSISDSKGCVHTKGLYESSDEVLLSESLITMLRSPLSATPSPSMIRGIAADNYSSQYNLTIPSSYGGLGSPATYRAAVLTSTQHWLVNLMQVDLTPVSIEVMTTDSASKINNCLFTFSFFGSNVSAVRGSLPYSCKNSSSEHPRVWKSSNVALPMMRALAGAAKAFSSRPSVFSSSSETSSSTSAADTANYTMPAFPDDFTANFLVVSPLKKSFYQVRESYSLYAGFSLTSLQFPLKGIAGRVYKHEWYTNSWNQMSYYHTEFAVPSGQEMADEALRKYFFPDLNTCRRVVIAYDLMARSSSSLLLYSPNVPPTFIGNQTVRNIPCGVWVAEIQGVRVTWYWATTDLVDTASFWTVDSIESGASAYTRLVRMTVTGKGGAPPLFAHHPFFPQSYAFPVDDRDVACTAMMPSEADMGCYSYAKNADYTYIYEITSFVPYVRRNDYRLPAACVGVKILGSIPSFQCNYKGITGGVASILLTVVALLFSLAGGCCVWCPFSRIVRHQQDELARFTWEIRLAQSANGTEGHDTTDVGAKGESDGRNPSS

Target ORF information:

RefSeq Version	XM_001469148.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001469148.1

ORF Insert Sequence:

ATGATGCGTA CTTCTGCCGT GGTGACGACG CTCGCCGTGA CCGCGGCGCT GCTTGCCCTG 
CTCAGCGTCT CTGTCGCAGT GAGCGCGGTG AACCTGCTGC CGCTGATGGG TGAGGGATTG 
TTCGATGTCG AGGTGGTGTG CCGCAGCGCC ATGCCGAGTG AGCCGACGGT CTACGACAGA 
TCCGTGATCA GTGCATTTCG CTTCTCCGTC AATGCGAGCG CGGACGGCAC GAAAGAGAAA 
GTGCACCTCC CATTATACGT GGAGCGCATC CTAGACAGCG ACTACGTCCG TACCTACTAC 
ATCAACTCTA CCGACAAGTA CAGCATCTCC GACTCCAAGG GCTGTGTGCA CACGAAGGGG 
TTGTATGAAT CCTCGGACGA GGTGCTCTTG TCTGAGAGTC TCATTACTAT GCTGCGTTCC 
CCGCTCTCAG CGACACCCAG CCCGAGCATG ATTCGCGGTA TTGCCGCCGA TAACTACTCG 
AGCCAGTATA ACCTCACGAT TCCGAGCAGT TACGGTGGTC TTGGGTCGCC CGCCACTTAC 
CGCGCCGCTG TGTTGACGAG CACGCAGCAC TGGTTGGTGA ACTTGATGCA GGTGGACCTG 
ACGCCGGTGT CGATCGAGGT GATGACAACA GACTCCGCCA GCAAGATTAA CAACTGCCTG 
TTTACTTTCT CCTTCTTTGG CTCGAACGTG TCCGCCGTGC GGGGGTCTCT TCCGTACTCC 
TGCAAAAACT CATCCTCTGA GCACCCACGA GTCTGGAAGT CGTCGAACGT TGCTCTGCCG 
ATGATGAGAG CCCTCGCGGG CGCTGCCAAG GCCTTTTCAT CGCGGCCCAG TGTCTTCAGC 
AGCTCGAGTG AGACATCGTC ATCAACCTCA GCAGCGGACA CTGCCAACTA CACGATGCCA 
GCGTTTCCTG ATGATTTCAC AGCAAATTTC CTTGTCGTTT CGCCGCTTAA GAAGTCCTTC 
TACCAGGTTC GCGAGTCCTA CAGCCTCTAT GCGGGTTTCT CCCTCACCAG CTTGCAGTTC 
CCCCTGAAGG GTATCGCTGG TCGCGTGTAC AAGCACGAGT GGTACACCAA CTCGTGGAAT 
CAGATGTCGT ACTACCACAC CGAGTTTGCA GTGCCGAGCG GCCAGGAGAT GGCCGACGAG 
GCTCTGCGCA AGTACTTCTT CCCTGACCTG AACACCTGCA GACGCGTCGT CATTGCCTAC 
GACTTGATGG CCAGGAGCTC CAGCTCCCTG CTGCTCTACT CGCCAAATGT GCCGCCGACG 
TTTATCGGCA ACCAGACGGT GCGCAACATC CCGTGCGGGG TGTGGGTGGC GGAGATACAA 
GGCGTCCGTG TAACGTGGTA CTGGGCGACT ACTGATTTGG TGGACACGGC GTCGTTCTGG 
ACCGTCGACA GCATAGAAAG TGGCGCGTCG GCTTACACCC GGCTGGTGCG CATGACGGTG 
ACCGGCAAGG GCGGCGCCCC GCCGCTGTTC GCGCACCACC CCTTCTTCCC GCAAAGCTAC 
GCCTTCCCTG TGGATGATCG TGATGTGGCG TGCACTGCGA TGATGCCTTC TGAGGCGGAT 
ATGGGCTGCT ACAGCTACGC CAAAAACGCT GATTACACTT ACATATACGA AATCACGTCT 
TTTGTGCCGT ACGTTCGAAG GAATGACTAT CGTCTCCCTG CCGCGTGCGT CGGCGTCAAG 
ATATTGGGCT CAATCCCCAG CTTTCAGTGC AACTACAAAG GCATCACGGG CGGCGTGGCG 
TCCATACTGC TGACTGTGGT TGCGCTGCTG TTCTCCCTTG CGGGCGGGTG CTGCGTGTGG 
TGCCCCTTCT CCCGAATTGT GCGTCACCAA CAGGATGAGC TGGCGCGATT CACGTGGGAG 
ATACGTCTTG CTCAAAGCGC GAACGGCACT GAGGGGCATG ACACAACGGA CGTCGGCGCC 
AAAGGCGAAT CTGATGGCAG GAACCCTTCC TCGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_35_3820 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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