LOC102311575 cDNA ORF clone, Haplochromis burtoni(Burton's mouthbrooder)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC102311575
Entrez Gene ID	102311575
Full Name	MHC class II regulatory factor RFX1-like
Gene Type	protein-coding
Organism	Haplochromis burtoni(Burton's mouthbrooder)

mRNA and Protein(s)

mRNA	Protein	Name
XM_014329433.1	XP_014184919.1	MHC class II regulatory factor RFX1-like

Pathways from BioSystems
Gene Ontology

The following LOC102311575 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC102311575 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OHa32222	XM_014329433.1 Latest version!	Haplochromis burtoni MHC class II regulatory factor RFX1-like (LOC102311575), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$629.30 $899.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC102311575 ( XM_014329433.1 ) cDNA ORF clone, Haplochromis burtoni(Burton's mouthbrooder) -> XP_014184919.1 Haplochromis burtoni MHC class II regulatory factor RFX1-like (LOC102311575), mRNA.

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CloneID	OHa32222
Clone ID Related Accession (Same CDS sequence)	XM_014329433.1
Accession Version	XM_014329433.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3009bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-09-28
Organism	Haplochromis burtoni(Burton's mouthbrooder)
Product	MHC class II regulatory factor RFX1-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005179974.1) and transcript sequences (GBBF01000707.1 and GBBF01000721.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Haplochromis burtoni Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 1099 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGGCCACTA CAGGCTACGT AGGTGAGATC CAGCCAGCGG CCCAAACTCA GGGGACTGCT 
GTCACTGTGA CAACGGGTCA ACCTGATGCC AGCTCCACCC CTGTAACTGC CCCACAATTT 
TTGGCTGAGA TTCAGACTAC TGTGGCTGCT CCCACTGTGG TCACACCCAC AGGCCAAACT 
ACTCCCACAG AGCAAGCCGC TTCCATCACC ACCCAAAAGC CCGCTGCTAG TCAGACCCAG 
TCCACAGTGC AACCCCAGCC AGCTCAGACG CAGTATGTGA CTGCAGAGAT CCAGGGCTCC 
CCCACGCAGT CAGGAAATGC TCAGAGCACT CCACAGTACA TCGTTGTTAC TGTCACAGAG 
GGTTCCCTTC ACTCAAATGA CAGCGTGTCA GACTCCAGTC CACCTCCAGC TGTGGTGCAG 
ACTGGAGTCC CCACACAAGT TGTTCAGCAG GTGCAGACAG CTCAGCAGAG GTCAGTGGTG 
CAGGCCACCT CCCAGATTGC CAAAACTGAG CCAGGCACAC AGCTCAGCGT CACCAGTCTA 
CAGCCTGTCC ACATCACCCA GGAGCTTCCC CTTAGCACGG AGGTGACCGG TTTAGTCAGG 
GATAGGAAAC TAGAAGACTG GCAGCTGCGT CATGAGGCAG AGGAGTCAGT CTGCCTTGCC 
TGGATGTCAG CAGACTGCGT AAACGGCTAC TGCTGCAAAC CCGTCTACCT CCCCTTGGAT 
GAGTATTGGC AGTCACTGTG CATGCTCTCT GTGCATGCTG AGAGAGAGAT AGGCTACCCT 
GCCATCCTCA GCTCAGGTCC CAATCAGCCA CCTCTGCACA CAGCAACCGC CACTTTCCAA 
GTCCAGCAGC AGCTCACATC AGTGCCAGTG CAACATGTGT ACACCAATCA AGTGCAGTAT 
GTTGAAGGAG AAGACAACAA CTACACCACC AGCACCATTC GCTCCGGCAC CTTCCCTTAC 
ACCGACACCC CTTTGTACAC CCAGACCACC GCCGCTCCAT ATTACGAAGG TCAGCCGACT 
TCCGGCACCC AGGCCTCCAC GCCCGGCACA CCTCTGACTG TGTCCGTGAC AGCCGGCACC 
ACAGCGGGCG TCTCGATGTT CGTGGCCCAG CCTACCACCG CGGCGGGGGG AGGGGCCACA 
GTGGTGACGG CAGGCGGCAC GACCAACGGG GCCGGAGAAG GGGCAGGGAC CAACGGCGGC 
GCGGCAGGCA GTTATGTGAT CCAGGGGGGT TACATGCTGG GCAGCGGCGG CAGCAGCAGC 
AGCAGCGGGT CGGCAGCTGG CAACAGTCAG AACTACTCAC ACACTGCCCG CGCCTCTCCG 
GCCACTGTGA GTATTACAGA GGGCGAGGAG AGTAGCGTGC CGTCGGCAGA CAAGAAGGTA 
CAGTGGTTGC TGGACAACTA TGAGACAGCT GAAGGAGTGA GTCTGCCCCG TTCCACCCTT 
TACTGCCATT ACTTGCTGCA CTGCCAGGAG CAGAAGCTAG AACCTGTTAA TGCTGCGTCA 
TTCGGGAAAC TCATAAGATC TGTGTTCATG GGGCTACGCA CACGGCGTCT GGGCACTCGG 
GGTAATTCTA AATACCACTA TTATGGGCTG AGAATCAAAG CGGGCTCTTC TCTTCTCCGG 
CTGATGGAAG ACCAACAACA CCTGGCTATG AGGCAACAGC CGTTCTCACA GAAACAGAGG 
TTGAAGCCTG TTCATAAGGT GGAAGGAATG ACCAATGGAA CGGCAGCAGG AGCAGGTCAG 
CAGCAGCAAC AGCAGCAGGG ATCGGGCCAC GTGGATATCA GCACCCAGGT TCAGCAGTAC 
CAACAGTTCC TTGATGCATC CAGAGCTCTC CCAGAGTTCC CAGAGATCGA TCTCCAGGGG 
AAGTCTCTGC CAGAGGGCAT TGAGCTGGAG CACATAAAGA GCTTTCAGCT GCTGTACAGA 
GAACATTGTG AGGCTATTCT CGATGTGATG GTTAACCTGC AGTTTACCCT AGTGGAGACT 
CTGTGGAAGA CCTTCTGGAG GTTCAGCCAA AGTCAGGCCG GAGATGCCAC GTTGGCCGTT 
CACGATGAGT CAGAGAAGCG TCTCCCTAAG TCCTGCCTGG TGTTGCTGTG CAAATATGAG 
CCAGTGCTGC GCTGGAGCCG CGACTGTGAC AACAGCCTCT ACCAGGGCCT GGTGGAAATC 
CTCATCCCTG ATGTCCTCAG ACCCATCCCC AGTGCCTTAA CTCAAGCCAT TCGCAACTTT 
GCCAAGAGCC TGGAGAGCTG GCTGACCAAT GCCATGATGA ACATCCCTGA GGAAATGGTC 
CGCATCAAGG TCACATCAGC CAATGCTTTT GCTCAGACCC TGCGCCGCTA CACCAGTCTG 
AACCACCTGG CCCAGGCAGC CCGTGCTGTC CTCCAGAACA CGGCTCAGAT CAATCAGATG 
CTGTCCGACC TCAACCGCGT CGACTTTGCC AACGTCCAGG AGCAGGCTTC ATGGGTGTGC 
CGGTGCGAAG ACCGTGTGGT CCAGCGGCTC GAGCAGGACT TCAAGCTGAC CCTCCAGCAG 
CAGAACTCAC TGGAGCAGTG GGCCGCGTGG CTCGACGGTG TGGTCTCCCA GGTCCTAAAG 
CCCTACCAAC ACAGCCCTGC TTTCCCTAAA GCTGCCAAGC TCTTTCTGCT CAAGTGGTCC 
TTTTACAGTT CCATGGTAAT CAGAGACCTC ACCCTGCGGA GTGCCGCCAG CTTCGGATCC 
TTTCACCTGA TTCGTCTGCT ATACGACGAG TACATGTACT ACCTTATCGA GCACAGAGTG 
GCCCAGGCTA AAGGAGAGAC CCCCATTGCT GTTATGGGAG AGTTTGCCAG CTTAGGCCGA 
GGTCTGAACC AGCTGGATCC GGATAAAGAA GAGGAAGAAG AAGAGGAGGA GGAGAGTGAT 
GAAGAAGGTC AGGAGCTGTC CCTTCCCTCA GACGGGGCCG TGCTCGGAGA GGAGTCTCTG 
GAGCCGCCTG CCAAGCTGGC CAGAACTGAC CAGAGAGTTC TCTTCGCCAC CGGGTCAGCT 
GACAACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_014184919.1
CDS	232..3240
Translation	MATTGYVGEIQPAAQTQGTAVTVTTGQPDASSTPVTAPQFLAEIQTTVAAPTVVTPTGQTTPTEQAASITTQKPAASQTQSTVQPQPAQTQYVTAEIQGSPTQSGNAQSTPQYIVVTVTEGSLHSNDSVSDSSPPPAVVQTGVPTQVVQQVQTAQQRSVVQATSQIAKTEPGTQLSVTSLQPVHITQELPLSTEVTGLVRDRKLEDWQLRHEAEESVCLAWMSADCVNGYCCKPVYLPLDEYWQSLCMLSVHAEREIGYPAILSSGPNQPPLHTATATFQVQQQLTSVPVQHVYTNQVQYVEGEDNNYTTSTIRSGTFPYTDTPLYTQTTAAPYYEGQPTSGTQASTPGTPLTVSVTAGTTAGVSMFVAQPTTAAGGGATVVTAGGTTNGAGEGAGTNGGAAGSYVIQGGYMLGSGGSSSSSGSAAGNSQNYSHTARASPATVSITEGEESSVPSADKKVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKAGSSLLRLMEDQQHLAMRQQPFSQKQRLKPVHKVEGMTNGTAAGAGQQQQQQQGSGHVDISTQVQQYQQFLDASRALPEFPEIDLQGKSLPEGIELEHIKSFQLLYREHCEAILDVMVNLQFTLVETLWKTFWRFSQSQAGDATLAVHDESEKRLPKSCLVLLCKYEPVLRWSRDCDNSLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTNAMMNIPEEMVRIKVTSANAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKLTLQQQNSLEQWAAWLDGVVSQVLKPYQHSPAFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFASLGRGLNQLDPDKEEEEEEEEESDEEGQELSLPSDGAVLGEESLEPPAKLARTDQRVLFATGSADN

Target ORF information:

RefSeq Version	XM_014329433.1
Organism	Haplochromis burtoni(Burton's mouthbrooder)
Definition	Haplochromis burtoni MHC class II regulatory factor RFX1-like (LOC102311575), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_014329433.1

ORF Insert Sequence:

ATGGCCACTA CAGGCTACGT AGGTGAGATC CAGCCAGCGG CCCAAACTCA GGGGACTGCT 
GTCACTGTGA CAACGGGTCA ACCTGATGCC AGCTCCACCC CTGTAACTGC CCCACAATTT 
TTGGCTGAGA TTCAGACTAC TGTGGCTGCT CCCACTGTGG TCACACCCAC AGGCCAAACT 
ACTCCCACAG AGCAAGCCGC TTCCATCACC ACCCAAAAGC CCGCTGCTAG TCAGACCCAG 
TCCACAGTGC AACCCCAGCC AGCTCAGACG CAGTATGTGA CTGCAGAGAT CCAGGGCTCC 
CCCACGCAGT CAGGAAATGC TCAGAGCACT CCACAGTACA TCGTTGTTAC TGTCACAGAG 
GGTTCCCTTC ACTCAAATGA CAGCGTGTCA GACTCCAGTC CACCTCCAGC TGTGGTGCAG 
ACTGGAGTCC CCACACAAGT TGTTCAGCAG GTGCAGACAG CTCAGCAGAG GTCAGTGGTG 
CAGGCCACCT CCCAGATTGC CAAAACTGAG CCAGGCACAC AGCTCAGCGT CACCAGTCTA 
CAGCCTGTCC ACATCACCCA GGAGCTTCCC CTTAGCACGG AGGTGACCGG TTTAGTCAGG 
GATAGGAAAC TAGAAGACTG GCAGCTGCGT CATGAGGCAG AGGAGTCAGT CTGCCTTGCC 
TGGATGTCAG CAGACTGCGT AAACGGCTAC TGCTGCAAAC CCGTCTACCT CCCCTTGGAT 
GAGTATTGGC AGTCACTGTG CATGCTCTCT GTGCATGCTG AGAGAGAGAT AGGCTACCCT 
GCCATCCTCA GCTCAGGTCC CAATCAGCCA CCTCTGCACA CAGCAACCGC CACTTTCCAA 
GTCCAGCAGC AGCTCACATC AGTGCCAGTG CAACATGTGT ACACCAATCA AGTGCAGTAT 
GTTGAAGGAG AAGACAACAA CTACACCACC AGCACCATTC GCTCCGGCAC CTTCCCTTAC 
ACCGACACCC CTTTGTACAC CCAGACCACC GCCGCTCCAT ATTACGAAGG TCAGCCGACT 
TCCGGCACCC AGGCCTCCAC GCCCGGCACA CCTCTGACTG TGTCCGTGAC AGCCGGCACC 
ACAGCGGGCG TCTCGATGTT CGTGGCCCAG CCTACCACCG CGGCGGGGGG AGGGGCCACA 
GTGGTGACGG CAGGCGGCAC GACCAACGGG GCCGGAGAAG GGGCAGGGAC CAACGGCGGC 
GCGGCAGGCA GTTATGTGAT CCAGGGGGGT TACATGCTGG GCAGCGGCGG CAGCAGCAGC 
AGCAGCGGGT CGGCAGCTGG CAACAGTCAG AACTACTCAC ACACTGCCCG CGCCTCTCCG 
GCCACTGTGA GTATTACAGA GGGCGAGGAG AGTAGCGTGC CGTCGGCAGA CAAGAAGGTA 
CAGTGGTTGC TGGACAACTA TGAGACAGCT GAAGGAGTGA GTCTGCCCCG TTCCACCCTT 
TACTGCCATT ACTTGCTGCA CTGCCAGGAG CAGAAGCTAG AACCTGTTAA TGCTGCGTCA 
TTCGGGAAAC TCATAAGATC TGTGTTCATG GGGCTACGCA CACGGCGTCT GGGCACTCGG 
GGTAATTCTA AATACCACTA TTATGGGCTG AGAATCAAAG CGGGCTCTTC TCTTCTCCGG 
CTGATGGAAG ACCAACAACA CCTGGCTATG AGGCAACAGC CGTTCTCACA GAAACAGAGG 
TTGAAGCCTG TTCATAAGGT GGAAGGAATG ACCAATGGAA CGGCAGCAGG AGCAGGTCAG 
CAGCAGCAAC AGCAGCAGGG ATCGGGCCAC GTGGATATCA GCACCCAGGT TCAGCAGTAC 
CAACAGTTCC TTGATGCATC CAGAGCTCTC CCAGAGTTCC CAGAGATCGA TCTCCAGGGG 
AAGTCTCTGC CAGAGGGCAT TGAGCTGGAG CACATAAAGA GCTTTCAGCT GCTGTACAGA 
GAACATTGTG AGGCTATTCT CGATGTGATG GTTAACCTGC AGTTTACCCT AGTGGAGACT 
CTGTGGAAGA CCTTCTGGAG GTTCAGCCAA AGTCAGGCCG GAGATGCCAC GTTGGCCGTT 
CACGATGAGT CAGAGAAGCG TCTCCCTAAG TCCTGCCTGG TGTTGCTGTG CAAATATGAG 
CCAGTGCTGC GCTGGAGCCG CGACTGTGAC AACAGCCTCT ACCAGGGCCT GGTGGAAATC 
CTCATCCCTG ATGTCCTCAG ACCCATCCCC AGTGCCTTAA CTCAAGCCAT TCGCAACTTT 
GCCAAGAGCC TGGAGAGCTG GCTGACCAAT GCCATGATGA ACATCCCTGA GGAAATGGTC 
CGCATCAAGG TCACATCAGC CAATGCTTTT GCTCAGACCC TGCGCCGCTA CACCAGTCTG 
AACCACCTGG CCCAGGCAGC CCGTGCTGTC CTCCAGAACA CGGCTCAGAT CAATCAGATG 
CTGTCCGACC TCAACCGCGT CGACTTTGCC AACGTCCAGG AGCAGGCTTC ATGGGTGTGC 
CGGTGCGAAG ACCGTGTGGT CCAGCGGCTC GAGCAGGACT TCAAGCTGAC CCTCCAGCAG 
CAGAACTCAC TGGAGCAGTG GGCCGCGTGG CTCGACGGTG TGGTCTCCCA GGTCCTAAAG 
CCCTACCAAC ACAGCCCTGC TTTCCCTAAA GCTGCCAAGC TCTTTCTGCT CAAGTGGTCC 
TTTTACAGTT CCATGGTAAT CAGAGACCTC ACCCTGCGGA GTGCCGCCAG CTTCGGATCC 
TTTCACCTGA TTCGTCTGCT ATACGACGAG TACATGTACT ACCTTATCGA GCACAGAGTG 
GCCCAGGCTA AAGGAGAGAC CCCCATTGCT GTTATGGGAG AGTTTGCCAG CTTAGGCCGA 
GGTCTGAACC AGCTGGATCC GGATAAAGAA GAGGAAGAAG AAGAGGAGGA GGAGAGTGAT 
GAAGAAGGTC AGGAGCTGTC CCTTCCCTCA GACGGGGCCG TGCTCGGAGA GGAGTCTCTG 
GAGCCGCCTG CCAAGCTGGC CAGAACTGAC CAGAGAGTTC TCTTCGCCAC CGGGTCAGCT 
GACAACTAG