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ORF cDNA Clones and Custom Clones » Species Summary » Danio rerio » LOC100002406 cDNA ORF clone
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LOC100002406 cDNA ORF clone, Danio rerio(Zebrafish)

Summary

Gene Symbol LOC100002406
Entrez Gene ID 100002406
Full Name thymic stromal cotransporter homolog
Gene Type protein-coding
Organism Danio rerio(Zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_017357996.2 XP_017213485.1 thymic stromal cotransporter homolog
XM_017357996.1 XP_017213485.1 thymic stromal cotransporter homolog

Pathways from BioSystems


Homologies


Rattus norvegicus (Norway rat) Slc46a2 NP_001100122.1
Gallus gallus (chicken) SLC46A2 XP_429188.3
Pan troglodytes (chimpanzee) SLC46A2 XP_528392.2
Canis lupus familiaris (dog) SLC46A2 NP_001002997.1
Xenopus tropicalis (tropical clawed frog) LOC100487507 XP_002936742.1
SLC46A2 XP_001113919.1
Mus musculus (house mouse) Slc46a2 NP_066395.3
Danio rerio (zebrafish) LOC100002406 XP_001921462.3
Homo sapiens (human) SLC46A2 NP_149040.3
Bos taurus (cattle) SLC46A2 NP_001019690.1
Xenopus tropicalis (tropical clawed frog) LOC100487354 XP_002936741.2
Xenopus tropicalis (tropical clawed frog) LOC100487203 XP_002936740.2

Gene Ontology

The following LOC100002406 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100002406 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa54050 XM_017357996.2
Latest version!		 Danio rerio thymic stromal cotransporter homolog (LOC100002406), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00
View Old Accession Versions >>
ODa54050 XM_017357996.1 Danio rerio thymic stromal cotransporter homolog (LOC100002406), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa54050
Clone ID Related Accession (Same CDS sequence) XM_017357996.2 , XM_017357996.1
Accession Version XM_017357996.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1275bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product thymic stromal cotransporter homolog
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007121.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017357996.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
ATGGTTACCT GTCGAAAATA CATCGCTCCT CTGGTCTTCA GCGCCCAGGT GGCCAGCTCG 
TTTTTTGACA CCGCTCTCCA AATGGTCGTC AAAGAGCGAT GCGCAAACGC CACGGACTCA 
GACGGCCAGC AGAAAGCCAT CACCAACTTC AACATGACCT ATAATATGAT TGCCAAGTTC 
ATGCCGTTTC TGCCCGCGAT CCTCCTGGCT AAAGTCGGAG ACAGGGGTTA CAGGAAAGTG 
CCGATAGTCG TTCCACTGGT CGGCTACTTT CTGTCCAGAG GGTTGCTGCT GTTGGATGTC 
GCTTTTGATT GGCCTCTCCA GGTGCTGTAC GCGGTGCCGG TGATCCACGG ACTGTGCGGG 
GGATTCGCGT CCTACTGGGC CGGTGTGATG GCGCTGGTGT CTGTCAGCTC TGGGGAGGAG 
GAGCGCTCCG TGAGCATCAT GATGACCGAG CTGGTGTACG GAATCGCCGG CTTCATCGGG 
AGTTTGGCTT CTGGTCACTT ATTCGCCCTC TATACAGTTA ATCTCAAGCA AGGGGTCATT 
TTATCCGGTT CTAGTGTGGT CCTGTATCTT TTATGCCTGC TTTACGCGGC GACTTTCCTG 
CGCGTGGGTC CTCCGGCGGT GCTTGGAGAT CGGCTGGAGC GCCGGGAAAG TTTTGGCATC 
ATCAACCACG AGGCCCGGGA TAAAATCAAC ATCGCTTTGC TGTTCGTCAG TGGGATTCTG 
TACGATATCG CAGTGGCCGG AGGGATGGAG ATGCTGGCGG CGTACGTGCT CAAAGAGCCG 
CTGAACTGGG GCGCGACGCT GGTGGGGTAC GGGAACGCGG CGGGGTCCCT CCTCTTTATC 
ACTAGCTTTT TGGGGGTGAA GATGTTCACG AGATTGTCTC TAAGGGACGA GAGCATGATC 
ATGGTAGGCA TGGTGTCTTT CGCGACTGGG ATCTACTTCA TGGCATTTGT GACCACAACT 
CCAATGTACT TTTTGGCTCG CTCCGTCACT CTGTTTGCTC TGATTCCAAT GCCCACCATT 
CGCTCGCTGC TGTCCAAACA AGTCAAGGGA ACATCATACG GCATTACCTT TGTCATGCTC 
CAATTGTCCT TCAAACTTGC GAGTTTGGCC ACCACACCAA TCTATACTAA GATTTATCAA 
GCCACACTCG ACACCTTCCC AGGGTTCGTC TTCATCCTGT CCAGCATCTT CACTGTTCTT 
TCTATTGTAC CCATTAGTAT TGTAGGATGT CGCTCTTCAA GACAAAACGG ATATGAGAGA 
ATTCAAGGGA ACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017213485.1
CDS468..1742
Translation

Target ORF information:

RefSeq Version XM_017357996.2
Organism Danio rerio(zebrafish)
Definition Danio rerio thymic stromal cotransporter homolog (LOC100002406), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017357996.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
ATGGTTACCT GTCGAAAATA CATCGCTCCT CTGGTCTTCA GCGCCCAGGT GGCCAGCTCG 
TTTTTTGACA CCGCTCTCCA AATGGTCGTC AAAGAGCGAT GCGCAAACGC CACGGACTCA 
GACGGCCAGC AGAAAGCCAT CACCAACTTC AACATGACCT ATAATATGAT TGCCAAGTTC 
ATGCCGTTTC TGCCCGCGAT CCTCCTGGCT AAAGTCGGAG ACAGGGGTTA CAGGAAAGTG 
CCGATAGTCG TTCCACTGGT CGGCTACTTT CTGTCCAGAG GGTTGCTGCT GTTGGATGTC 
GCTTTTGATT GGCCTCTCCA GGTGCTGTAC GCGGTGCCGG TGATCCACGG ACTGTGCGGG 
GGATTCGCGT CCTACTGGGC CGGTGTGATG GCGCTGGTGT CTGTCAGCTC TGGGGAGGAG 
GAGCGCTCCG TGAGCATCAT GATGACCGAG CTGGTGTACG GAATCGCCGG CTTCATCGGG 
AGTTTGGCTT CTGGTCACTT ATTCGCCCTC TATACAGTTA ATCTCAAGCA AGGGGTCATT 
TTATCCGGTT CTAGTGTGGT CCTGTATCTT TTATGCCTGC TTTACGCGGC GACTTTCCTG 
CGCGTGGGTC CTCCGGCGGT GCTTGGAGAT CGGCTGGAGC GCCGGGAAAG TTTTGGCATC 
ATCAACCACG AGGCCCGGGA TAAAATCAAC ATCGCTTTGC TGTTCGTCAG TGGGATTCTG 
TACGATATCG CAGTGGCCGG AGGGATGGAG ATGCTGGCGG CGTACGTGCT CAAAGAGCCG 
CTGAACTGGG GCGCGACGCT GGTGGGGTAC GGGAACGCGG CGGGGTCCCT CCTCTTTATC 
ACTAGCTTTT TGGGGGTGAA GATGTTCACG AGATTGTCTC TAAGGGACGA GAGCATGATC 
ATGGTAGGCA TGGTGTCTTT CGCGACTGGG ATCTACTTCA TGGCATTTGT GACCACAACT 
CCAATGTACT TTTTGGCTCG CTCCGTCACT CTGTTTGCTC TGATTCCAAT GCCCACCATT 
CGCTCGCTGC TGTCCAAACA AGTCAAGGGA ACATCATACG GCATTACCTT TGTCATGCTC 
CAATTGTCCT TCAAACTTGC GAGTTTGGCC ACCACACCAA TCTATACTAA GATTTATCAA 
GCCACACTCG ACACCTTCCC AGGGTTCGTC TTCATCCTGT CCAGCATCTT CACTGTTCTT 
TCTATTGTAC CCATTAGTAT TGTAGGATGT CGCTCTTCAA GACAAAACGG ATATGAGAGA 
ATTCAAGGGA ACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa54050
Clone ID Related Accession (Same CDS sequence) XM_017357996.2 , XM_017357996.1
Accession Version XM_017357996.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1275bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product thymic stromal cotransporter homolog
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007121.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
ATGGTTACCT GTCGAAAATA CATCGCTCCT CTGGTCTTCA GCGCCCAGGT GGCCAGCTCG 
TTTTTTGACA CCGCTCTCCA AATGGTCGTC AAAGAGCGAT GCGCAAACGC CACGGACTCA 
GACGGCCAGC AGAAAGCCAT CACCAACTTC AACATGACCT ATAATATGAT TGCCAAGTTC 
ATGCCGTTTC TGCCCGCGAT CCTCCTGGCT AAAGTCGGAG ACAGGGGTTA CAGGAAAGTG 
CCGATAGTCG TTCCACTGGT CGGCTACTTT CTGTCCAGAG GGTTGCTGCT GTTGGATGTC 
GCTTTTGATT GGCCTCTCCA GGTGCTGTAC GCGGTGCCGG TGATCCACGG ACTGTGCGGG 
GGATTCGCGT CCTACTGGGC CGGTGTGATG GCGCTGGTGT CTGTCAGCTC TGGGGAGGAG 
GAGCGCTCCG TGAGCATCAT GATGACCGAG CTGGTGTACG GAATCGCCGG CTTCATCGGG 
AGTTTGGCTT CTGGTCACTT ATTCGCCCTC TATACAGTTA ATCTCAAGCA AGGGGTCATT 
TTATCCGGTT CTAGTGTGGT CCTGTATCTT TTATGCCTGC TTTACGCGGC GACTTTCCTG 
CGCGTGGGTC CTCCGGCGGT GCTTGGAGAT CGGCTGGAGC GCCGGGAAAG TTTTGGCATC 
ATCAACCACG AGGCCCGGGA TAAAATCAAC ATCGCTTTGC TGTTCGTCAG TGGGATTCTG 
TACGATATCG CAGTGGCCGG AGGGATGGAG ATGCTGGCGG CGTACGTGCT CAAAGAGCCG 
CTGAACTGGG GCGCGACGCT GGTGGGGTAC GGGAACGCGG CGGGGTCCCT CCTCTTTATC 
ACTAGCTTTT TGGGGGTGAA GATGTTCACG AGATTGTCTC TAAGGGACGA GAGCATGATC 
ATGGTAGGCA TGGTGTCTTT CGCGACTGGG ATCTACTTCA TGGCATTTGT GACCACAACT 
CCAATGTACT TTTTGGCTCG CTCCGTCACT CTGTTTGCTC TGATTCCAAT GCCCACCATT 
CGCTCGCTGC TGTCCAAACA AGTCAAGGGA ACATCATACG GCATTACCTT TGTCATGCTC 
CAATTGTCCT TCAAACTTGC GAGTTTGGCC ACCACACCAA TCTATACTAA GATTTATCAA 
GCCACACTCG ACACCTTCCC AGGGTTCGTC TTCATCCTGT CCAGCATCTT CACTGTTCTT 
TCTATTGTAC CCATTAGTAT TGTAGGATGT CGCTCTTCAA GACAAAACGG ATATGAGAGA 
ATTCAAGGGA ACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017213485.1
CDS485..1759
Translation

Target ORF information:

RefSeq Version XM_017357996.1
Organism Danio rerio(Zebrafish)
Definition Danio rerio thymic stromal cotransporter homolog (LOC100002406), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017357996.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
ATGGTTACCT GTCGAAAATA CATCGCTCCT CTGGTCTTCA GCGCCCAGGT GGCCAGCTCG 
TTTTTTGACA CCGCTCTCCA AATGGTCGTC AAAGAGCGAT GCGCAAACGC CACGGACTCA 
GACGGCCAGC AGAAAGCCAT CACCAACTTC AACATGACCT ATAATATGAT TGCCAAGTTC 
ATGCCGTTTC TGCCCGCGAT CCTCCTGGCT AAAGTCGGAG ACAGGGGTTA CAGGAAAGTG 
CCGATAGTCG TTCCACTGGT CGGCTACTTT CTGTCCAGAG GGTTGCTGCT GTTGGATGTC 
GCTTTTGATT GGCCTCTCCA GGTGCTGTAC GCGGTGCCGG TGATCCACGG ACTGTGCGGG 
GGATTCGCGT CCTACTGGGC CGGTGTGATG GCGCTGGTGT CTGTCAGCTC TGGGGAGGAG 
GAGCGCTCCG TGAGCATCAT GATGACCGAG CTGGTGTACG GAATCGCCGG CTTCATCGGG 
AGTTTGGCTT CTGGTCACTT ATTCGCCCTC TATACAGTTA ATCTCAAGCA AGGGGTCATT 
TTATCCGGTT CTAGTGTGGT CCTGTATCTT TTATGCCTGC TTTACGCGGC GACTTTCCTG 
CGCGTGGGTC CTCCGGCGGT GCTTGGAGAT CGGCTGGAGC GCCGGGAAAG TTTTGGCATC 
ATCAACCACG AGGCCCGGGA TAAAATCAAC ATCGCTTTGC TGTTCGTCAG TGGGATTCTG 
TACGATATCG CAGTGGCCGG AGGGATGGAG ATGCTGGCGG CGTACGTGCT CAAAGAGCCG 
CTGAACTGGG GCGCGACGCT GGTGGGGTAC GGGAACGCGG CGGGGTCCCT CCTCTTTATC 
ACTAGCTTTT TGGGGGTGAA GATGTTCACG AGATTGTCTC TAAGGGACGA GAGCATGATC 
ATGGTAGGCA TGGTGTCTTT CGCGACTGGG ATCTACTTCA TGGCATTTGT GACCACAACT 
CCAATGTACT TTTTGGCTCG CTCCGTCACT CTGTTTGCTC TGATTCCAAT GCCCACCATT 
CGCTCGCTGC TGTCCAAACA AGTCAAGGGA ACATCATACG GCATTACCTT TGTCATGCTC 
CAATTGTCCT TCAAACTTGC GAGTTTGGCC ACCACACCAA TCTATACTAA GATTTATCAA 
GCCACACTCG ACACCTTCCC AGGGTTCGTC TTCATCCTGT CCAGCATCTT CACTGTTCTT 
TCTATTGTAC CCATTAGTAT TGTAGGATGT CGCTCTTCAA GACAAAACGG ATATGAGAGA 
ATTCAAGGGA ACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed