| Gene Symbol |
cxxc1a |
| Entrez Gene ID |
393571 |
| Full Name |
CXXC finger protein 1a |
| Synonyms |
cddc1l,cxxc1l,zgc:63512 |
| General protein information |
- Preferred Names
CXXC finger protein 1a
Names
CXXC finger protein 1a
CXXC finger 1, like
|
| Gene Type |
protein-coding |
| Organism |
Danio rerio(zebrafish) |
mRNA and Protein(s)
| mRNA |
Protein |
Name |
| NM_200599.1 |
NP_956893.1 |
CXXC finger protein 1a |
| Homo sapiens (human) |
CXXC1 |
NP_001095124.1 |
| Mus musculus (house mouse) |
Cxxc1 |
NP_083144.1 |
| Rattus norvegicus (Norway rat) |
Cxxc1 |
NP_001073166.1 |
| Xenopus tropicalis (tropical clawed frog) |
cxxc1 |
XP_002943289.2 |
| Danio rerio (zebrafish) |
cxxc1 |
NP_956627.1 |
| Drosophila melanogaster (fruit fly) |
Cfp1 |
NP_001188570.1 |
| Canis lupus familiaris (dog) |
CXXC1 |
XP_005623161.1 |
| Bos taurus (cattle) |
CXXC1 |
NP_001019688.1 |
| Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP004704 |
XP_318129.4 |
| Pan troglodytes (chimpanzee) |
CXXC1 |
XP_001154076.1 |
|
CXXC1 |
XP_001093242.2 |
| Danio rerio (zebrafish) |
cxxc1l |
NP_956893.1 |
Related articles in PubMed
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
Efficient identification of CRISPR/Cas9-induced insertions/deletions by direct germline screening in zebrafish.
Brocal I, White RJ, Dooley CM, Carruthers SN, Clark R, Hall A, Busch-Nentwich EM, Stemple DL, Kettleborough RN
BMC genomics17259(2016 Mar)
A network of epigenetic regulators guides developmental haematopoiesis in vivo.
Huang HT, Kathrein KL, Barton A, Gitlin Z, Huang YH, Ward TP, Hofmann O, Dibiase A, Song A, Tyekucheva S, Hide W, Zhou Y, Zon LI
Nature cell biology15(12)1516-25(2013 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following cxxc1a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cxxc1a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID |
ODa33695 |
| Clone ID Related Accession (Same CDS sequence) |
NM_200599.1
|
| Accession Version |
NM_200599.1 Latest version! |
Documents for ORF clone product in default vector |
| Sequence Information |
ORF Nucleotide Sequence (Length: 1713bp)
Protein sequence
SNP |
| Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
 User Manual |
| Clone information |
Clone Map |
MSDS |
| Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
| ORF Insert Method |
CloneEZ™ Seamless cloning technology |
| Insert Structure |
linear |
| Update Date |
2017-08-05 |
| Organism |
Danio rerio(zebrafish) |
| Product |
CXXC finger protein 1a |
| Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC056775.1.
##Evidence-Data-START##
Transcript exon combination :: BC056775.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348]
##Evidence-Data-END##
|
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
| ATGGACAGTG AAGTGTCAGA CTTTGAACAG CCTCCCGGAC CAGAGAGGAC TCTGATTCGG
GGCAATGCTC CGGTGTATTG TGTTTGTCGC AGACCAGACA TCAACTGCTT CATGATTGGT
TGTGACAGCT GCAGCGAATG GTTTCATGGA GACTGCATTA AAATATCAGA GAAGACGGCC
AAAACCATCC GCGTGTGGTA CTGTGAAAAG TGCAGAAGTA AAGACGAAAC CTTAGAAGTC
AAATACCGCC CCAAGAAAAG CAGAGAGAAG GAAGCCGAGA CAGACGGGCC TGATACCCAG
CCTGACACAC CAGATTTTAA GTCAGACGGA CGGCGTGGGT CACGAATTAA GCGCTCTGCT
CGCATGTGTG GAGAATGTGA AGCCTGTTTG CGCACAGAGG ACTGCGGGCT GTGTGACTTC
TGCAAAGACA TGAAGAAGTT TGGAGGCCCG AATAAGATCA GACAGAAGTG TCGACTGAGG
CAGTGTGAAG TGCGCGCTAG GAAAATGTTG CGAGTGAAGG AAGAGGAGTA CTCCATGTCT
AAGAGCAGAG ACTATCAGGA CGGCCCACTG TCTGAAGAGT ACAGTGAGAA TGAGCTGGAG
CTGTATCAGC AGTACTGCGC GGGACAGTAT GGAGATAACG GCACGGGTTG GAATAGTGAT
GACGACGATG GTTCATATGG AGAATCGTCT CTGAGAAAGA AAGCTGTTAA GGTCAAACAC
GTGAAAAGAA GAGAAAAGCG ATCTGAAAAA TCTGAAAAAA AGAAAGAGGA GAATAAATCT
CGGAAGCACA AGCCCAAGCA GAAGCACCGT GACCGGGTGA GACACAGCGA GCGGGCAGAA
GTTCGAGACA GCGGAGGAGC CAGACAGTGC CTCGGACCCG GCTGTGTGGA AGCTGCACGC
GCAAACTCCA AATACTGCTC TGACGACTGC GGGATGAAGC TCGCTGCAAA TCGAATCTGT
GAGATTTTGC CCCAGCGGAT CCAGCAGTGG CAGCAGAGCC CGTGCATTGC AGAAGAGCAG
GGCAAGAAGT TTCTGGAGCG AATCCGCCGT GAGCAGCAGT TGGCTCGCAT GAGACTAACT
GAGATGGAGA AACGCTTTCA TGAGCTGGAG GGCATTATCG CTAAAGCCAA ACAGCAGGTC
GTGCAGTACG ATGAAGAGGT CAACGAGGGC GATGATGACA CCGATTTGCA AATCTTCTGT
GTGTCCTGCA GTCATTCAGT TAACCCCAAA GTGGCGCTAC GTCATATGGA AAGGTGCTAT
GCCAAGTATG AGAGTCAGAC ATCCTTTGGC TCCATGTATC CCACACGCAT AGAGGGTGCT
ACACGGCTCT TCTGTGATGT TTACAATCCA CAAAGTAAGA CATACTGTAA AAGACTGCAG
GTCCTCTGTC CGGAGCACTC CAGAGACCCC AAGATTCCTG CGGATGAGGT CTGTGGGTGT
CCACTGGTTC GAGATGTGTT CGAACCCACC GGTGAATACT GTAGAGTGTC CAAACGGAAG
TGTAATAAAC ACTACTGCTG GGAGAAACTC CGCAGGGCTG AAGTCGACCT GGAACGAGTG
CGAGTGTGGT ACAAGTTGGA TGAGTTGTTT GAGCAGGAGC GCAACGTGAA AACAGCCATG
ACGAATCGCG CAGGCCTAAT GGCGCTCATG CCGCACCAGA CAATTCAACA CGACCCAATT
ACCACTGACC TGAGAACCAG CAAAGACAGA TAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq |
NP_956893.1 |
| CDS | 171..1883 |
| Translation | |
Target ORF information:
| RefSeq Version | NM_200599.1 |
| Organism | Danio rerio(zebrafish) |
| Definition | Danio rerio CXXC finger protein 1a (cxxc1a), mRNA. |
Target ORF information:
| Epitope | DYKDDDDK |
| Bacterial selection | AMPR |
| Mammalian selection | NeoR |
| Vector | pcDNA3.1+/C-(K)DYK |
|
 NM_200599.1 |
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
| ATGGACAGTG AAGTGTCAGA CTTTGAACAG CCTCCCGGAC CAGAGAGGAC TCTGATTCGG
GGCAATGCTC CGGTGTATTG TGTTTGTCGC AGACCAGACA TCAACTGCTT CATGATTGGT
TGTGACAGCT GCAGCGAATG GTTTCATGGA GACTGCATTA AAATATCAGA GAAGACGGCC
AAAACCATCC GCGTGTGGTA CTGTGAAAAG TGCAGAAGTA AAGACGAAAC CTTAGAAGTC
AAATACCGCC CCAAGAAAAG CAGAGAGAAG GAAGCCGAGA CAGACGGGCC TGATACCCAG
CCTGACACAC CAGATTTTAA GTCAGACGGA CGGCGTGGGT CACGAATTAA GCGCTCTGCT
CGCATGTGTG GAGAATGTGA AGCCTGTTTG CGCACAGAGG ACTGCGGGCT GTGTGACTTC
TGCAAAGACA TGAAGAAGTT TGGAGGCCCG AATAAGATCA GACAGAAGTG TCGACTGAGG
CAGTGTGAAG TGCGCGCTAG GAAAATGTTG CGAGTGAAGG AAGAGGAGTA CTCCATGTCT
AAGAGCAGAG ACTATCAGGA CGGCCCACTG TCTGAAGAGT ACAGTGAGAA TGAGCTGGAG
CTGTATCAGC AGTACTGCGC GGGACAGTAT GGAGATAACG GCACGGGTTG GAATAGTGAT
GACGACGATG GTTCATATGG AGAATCGTCT CTGAGAAAGA AAGCTGTTAA GGTCAAACAC
GTGAAAAGAA GAGAAAAGCG ATCTGAAAAA TCTGAAAAAA AGAAAGAGGA GAATAAATCT
CGGAAGCACA AGCCCAAGCA GAAGCACCGT GACCGGGTGA GACACAGCGA GCGGGCAGAA
GTTCGAGACA GCGGAGGAGC CAGACAGTGC CTCGGACCCG GCTGTGTGGA AGCTGCACGC
GCAAACTCCA AATACTGCTC TGACGACTGC GGGATGAAGC TCGCTGCAAA TCGAATCTGT
GAGATTTTGC CCCAGCGGAT CCAGCAGTGG CAGCAGAGCC CGTGCATTGC AGAAGAGCAG
GGCAAGAAGT TTCTGGAGCG AATCCGCCGT GAGCAGCAGT TGGCTCGCAT GAGACTAACT
GAGATGGAGA AACGCTTTCA TGAGCTGGAG GGCATTATCG CTAAAGCCAA ACAGCAGGTC
GTGCAGTACG ATGAAGAGGT CAACGAGGGC GATGATGACA CCGATTTGCA AATCTTCTGT
GTGTCCTGCA GTCATTCAGT TAACCCCAAA GTGGCGCTAC GTCATATGGA AAGGTGCTAT
GCCAAGTATG AGAGTCAGAC ATCCTTTGGC TCCATGTATC CCACACGCAT AGAGGGTGCT
ACACGGCTCT TCTGTGATGT TTACAATCCA CAAAGTAAGA CATACTGTAA AAGACTGCAG
GTCCTCTGTC CGGAGCACTC CAGAGACCCC AAGATTCCTG CGGATGAGGT CTGTGGGTGT
CCACTGGTTC GAGATGTGTT CGAACCCACC GGTGAATACT GTAGAGTGTC CAAACGGAAG
TGTAATAAAC ACTACTGCTG GGAGAAACTC CGCAGGGCTG AAGTCGACCT GGAACGAGTG
CGAGTGTGGT ACAAGTTGGA TGAGTTGTTT GAGCAGGAGC GCAACGTGAA AACAGCCATG
ACGAATCGCG CAGGCCTAAT GGCGCTCATG CCGCACCAGA CAATTCAACA CGACCCAATT
ACCACTGACC TGAGAACCAG CAAAGACAGA TAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J |
|
A network of epigenetic regulators guides developmental haematopoiesis in vivo.
Nature cell biology15(12)1516-25(2013 Dec)
Huang HT,Kathrein KL,Barton A,Gitlin Z,Huang YH,Ward TP,Hofmann O,Dibiase A,Song A,Tyekucheva S,Hide W,Zhou Y,Zon LI |
