Gene Symbol | fancl |
Entrez Gene ID | 406255 |
Full Name | Fanconi anemia, complementation group L |
Synonyms | zgc:66144,zgc:76938 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » fancl cDNA ORF clone
gRNAs
Gene Symbol | fancl |
Entrez Gene ID | 406255 |
Full Name | Fanconi anemia, complementation group L |
Synonyms | zgc:66144,zgc:76938 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_021480553.1 | XP_021336228.1 | E3 ubiquitin-protein ligase FANCL isoform X1 |
NM_212982.1 | NP_998147.1 | E3 ubiquitin-protein ligase FANCL |
Homo sapiens (human) | FANCL | NP_001108108.1 |
Pan troglodytes (chimpanzee) | FANCL | XP_001157414.1 |
Mus musculus (house mouse) | Fancl | NP_080199.1 |
LOC717528 | XP_001115119.2 | |
Rattus norvegicus (Norway rat) | Fancl | NP_001178613.1 |
Oryza sativa (rice) | Os03g0726900 | NP_001051138.1 |
Bos taurus (cattle) | FANCL | NP_001069800.1 |
Xenopus tropicalis (tropical clawed frog) | fancl | NP_001007482.1 |
Canis lupus familiaris (dog) | FANCL | XP_005626177.1 |
Gallus gallus (chicken) | FANCL | NP_001029113.1 |
Danio rerio (zebrafish) | fancl | NP_998147.1 |
Arabidopsis thaliana (thale cress) | AT5G65740 | NP_001032152.1 |
Heat-induced masculinization in domesticated zebrafish is family-specific and yields a set of different gonadal transcriptomes.
Ribas L, Liew WC, D?az N, Sreenivasan R, Orb?n L, Piferrer F
Proceedings of the National Academy of Sciences of the United States of America114(6)E941-E950(2017 Feb)
Identifying candidate genes for 2p15p16.1 microdeletion syndrome using clinical, genomic, and functional analysis.
Bagheri H, Badduke C, Qiao Y, Colnaghi R, Abramowicz I, Alcantara D, Dunham C, Wen J, Wildin RS, Nowaczyk MJ, Eichmeyer J, Lehman A, Maranda B, Martell S, Shan X, Lewis SM, O'Driscoll M, Gregory-Evans CY, Rajcan-Separovic E
JCI insight1(3)e85461(2016 Mar)
Zebrafish vasa is required for germ-cell differentiation and maintenance.
Hartung O, Forbes MM, Marlow FL
Molecular reproduction and development81(10)946-61(2014 Oct)
Gonad differentiation in zebrafish is regulated by the canonical Wnt signaling pathway.
Sreenivasan R, Jiang J, Wang X, B?rtfai R, Kwan HY, Christoffels A, Orb?n L
Biology of reproduction90(2)45(2014 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following fancl gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the fancl cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa33216 | |
Clone ID Related Accession (Same CDS sequence) | NM_212982.1 | |
Accession Version | NM_212982.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1116bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-22 | |
Organism | Danio rerio(zebrafish) | |
Product | E3 ubiquitin-protein ligase FANCL | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC066750.1. ##Evidence-Data-START## Transcript exon combination :: BC066750.1, AY968598.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168447, SAMEA2168448 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGCTGCT TGCTGATGAG AGAAAGCCCT TTGATCATTG CGCTGAATAA AGAGAAGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_998147.1 |
CDS | 152..1267 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGCTGCT TGCTGATGAG AGAAAGCCCT TTGATCATTG CGCTGAATAA AGAGAAGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa148503 | |
Clone ID Related Accession (Same CDS sequence) | XM_021480553.1 | |
Accession Version | XM_021480553.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 951bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | E3 ubiquitin-protein ligase FANCL isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGCGGC TACTTCATGG TTATCAACAT ATTGTGAAGC AGAGATTACA GCATTCAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021336228.1 |
CDS | 304..1254 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGCGGC TACTTCATGG TTATCAACAT ATTGTGAAGC AGAGATTACA GCATTCAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Heat-induced masculinization in domesticated zebrafish is family-specific and yields a set of different gonadal transcriptomes. |
Identifying candidate genes for 2p15p16.1 microdeletion syndrome using clinical, genomic, and functional analysis. |
Zebrafish vasa is required for germ-cell differentiation and maintenance. |
Gonad differentiation in zebrafish is regulated by the canonical Wnt signaling pathway. |