Gene Symbol | psmb10 |
Entrez Gene ID | 436816 |
Full Name | zgc:92791 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » psmb10 cDNA ORF clone
Gene Symbol | psmb10 |
Entrez Gene ID | 436816 |
Full Name | zgc:92791 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001328552.2 | NP_001315481.1 | proteasome subunit beta type-10 |
XM_009301041.2 | XP_009299316.1 | proteasome subunit beta type-10 isoform X1 |
NM_001328552.1 | NP_001315481.1 | proteasome subunit beta type-10 |
NM_001002543.2 | NP_001002543.2 | proteasome subunit beta type-10 |
PSMB10 | XP_001095570.1 | |
Canis lupus familiaris (dog) | PSMB10 | XP_546869.3 |
Mus musculus (house mouse) | Psmb10 | NP_038668.2 |
Homo sapiens (human) | PSMB10 | NP_002792.1 |
Danio rerio (zebrafish) | zgc:92791 | NP_001002543.1 |
Bos taurus (cattle) | PSMB10 | NP_001029212.1 |
Pan troglodytes (chimpanzee) | PSMB10 | XP_001166577.2 |
Rattus norvegicus (Norway rat) | Psmb10 | NP_001020808.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100489016 | XP_002941310.2 |
Loss of DNA methylation in zebrafish embryos activates retrotransposons to trigger antiviral signaling.
Chernyavskaya Y, Mudbhary R, Zhang C, Tokarz D, Jacob V, Gopinath S, Sun X, Wang S, Magnani E, Madakashira BP, Yoder JA, Hoshida Y, Sadler KC
Development (Cambridge, England)144(16)2925-2939(2017 08)
Alternative haplotypes of antigen processing genes in zebrafish diverged early in vertebrate evolution.
McConnell SC, Hernandez KM, Wcisel DJ, Kettleborough RN, Stemple DL, Yoder JA, Andrade J, de Jong JL
Proceedings of the National Academy of Sciences of the United States of America113(34)E5014-23(2016 08)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following psmb10 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the psmb10 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa09912 | |
Clone ID Related Accession (Same CDS sequence) | NM_001328552.2 , XM_009301041.2 , NM_001328552.1 , NM_001002543.2 | |
Accession Version | NM_001328552.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 831bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-15 | |
Organism | Danio rerio(zebrafish) | |
Product | proteasome subunit beta type-10 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU467646.17. On Aug 3, 2018 this sequence version replaced NM_001328552.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: EH593335.1, EH592391.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCTCAACA CATCGACTAA AACACTGACT GGAGGATTCT CCTTCGAGAA CACACGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001315481.1 |
CDS | 76..906 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001328552.2 |
1 | ATGCTCAACA CATCGACTAA AACACTGACT GGAGGATTCT CCTTCGAGAA CACACGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa09912 | |
Clone ID Related Accession (Same CDS sequence) | NM_001328552.2 , XM_009301041.2 , NM_001328552.1 , NM_001002543.2 | |
Accession Version | NM_001328552.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 831bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-08-05 | |
Organism | Danio rerio(zebrafish) | |
Product | proteasome subunit beta type-10 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH587434.1 and EH468130.1. On Jun 17, 2016 this sequence version replaced XM_005164942.1. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same protein. ##Evidence-Data-START## Transcript exon combination :: EH592664.1, EH593335.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCTCAACA CATCGACTAA AACACTGACT GGAGGATTCT CCTTCGAGAA CACACGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001315481.1 |
CDS | 74..904 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001328552.1 |
1 | ATGCTCAACA CATCGACTAA AACACTGACT GGAGGATTCT CCTTCGAGAA CACACGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa09912 | |
Clone ID Related Accession (Same CDS sequence) | NM_001328552.2 , XM_009301041.2 , NM_001328552.1 , NM_001002543.2 | |
Accession Version | NM_001002543.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 831bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-15 | |
Organism | Danio rerio(zebrafish) | |
Product | proteasome subunit beta type-10 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU467646.17. On Jun 17, 2016 this sequence version replaced NM_001002543.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC076265.1, GDQH01010525.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCTCAACA CATCGACTAA AACACTGACT GGAGGATTCT CCTTCGAGAA CACACGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001002543.2 |
CDS | 99..929 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001002543.2 |
1 | ATGCTCAACA CATCGACTAA AACACTGACT GGAGGATTCT CCTTCGAGAA CACACGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa09912 | |
Clone ID Related Accession (Same CDS sequence) | NM_001328552.2 , XM_009301041.2 , NM_001328552.1 , NM_001002543.2 | |
Accession Version | XM_009301041.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 831bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | proteasome subunit beta type-10 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007115.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009301041.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTCAACA CATCGACTAA AACACTGACT GGAGGATTCT CCTTCGAGAA CACACGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009299316.1 |
CDS | 65..895 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009301041.2 |
1 | ATGCTCAACA CATCGACTAA AACACTGACT GGAGGATTCT CCTTCGAGAA CACACGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Loss of DNA methylation in zebrafish embryos activates retrotransposons to trigger antiviral signaling. |
Alternative haplotypes of antigen processing genes in zebrafish diverged early in vertebrate evolution. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
RFX transcription factors are essential for hearing in mice. |