Gene Symbol | ythdc1 |
Entrez Gene ID | 492769 |
Full Name | YTH domain containing 1 |
Synonyms | zgc:101592 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » ythdc1 cDNA ORF clone
Gene Symbol | ythdc1 |
Entrez Gene ID | 492769 |
Full Name | YTH domain containing 1 |
Synonyms | zgc:101592 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001007410.1 | NP_001007411.1 | YTH domain-containing protein 1 |
XM_021476130.1 | XP_021331805.1 | YTH domain-containing protein 1 isoform X1 |
XM_009302042.2 | XP_009300317.1 | YTH domain-containing protein 1 isoform X1 |
XM_009302042.3 | XP_009300317.1 | YTH domain-containing protein 1 isoform X2 |
Mus musculus (house mouse) | Ythdc1 | NP_808348.2 |
Homo sapiens (human) | YTHDC1 | NP_001026902.1 |
YTHDC1 | XP_001098270.2 | |
Bos taurus (cattle) | YTHDC1 | NP_001039985.1 |
Danio rerio (zebrafish) | ythdc1 | NP_001007411.1 |
Pan troglodytes (chimpanzee) | YTHDC1 | XP_517262.2 |
Xenopus tropicalis (tropical clawed frog) | ythdc1 | NP_001008121.1 |
Canis lupus familiaris (dog) | YTHDC1 | XP_005628316.1 |
Rattus norvegicus (Norway rat) | Ythdc1 | NP_596914.1 |
Towards the understanding of the cocoa transcriptome: Production and analysis of an exhaustive dataset of ESTs of Theobroma cacao L. generated from various tissues and under various conditions.
Argout X, Fouet O, Wincker P, Gramacho K, Legavre T, Sabau X, Risterucci AM, Da Silva C, Cascardo J, Allegre M, Kuhn D, Verica J, Courtois B, Loor G, Babin R, Sounigo O, Ducamp M, Guiltinan MJ, Ruiz M, Alemanno L, Machado R, Phillips W, Schnell R, Gilmour M, Rosenquist E, Butler D, Maximova S, Lanaud C
BMC genomics9512(2008 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following ythdc1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ythdc1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa41401 | |
Clone ID Related Accession (Same CDS sequence) | XM_009302042.2 , XM_009302042.3 | |
Accession Version | XM_009302042.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1662bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | YTH domain-containing protein 1 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009302042.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCGTCG ACAGGAGAGA CGAGAAAGAC GGGGAACTCA ATGTGCTGGA AGACATTTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009300317.1 |
CDS | 191..1852 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009302042.2 |
1 | ATGTCCGTCG ACAGGAGAGA CGAGAAAGAC GGGGAACTCA ATGTGCTGGA AGACATTTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa41401 | |
Clone ID Related Accession (Same CDS sequence) | XM_009302042.2 , XM_009302042.3 | |
Accession Version | XM_009302042.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1662bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | YTH domain-containing protein 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009302042.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCGTCG ACAGGAGAGA CGAGAAAGAC GGGGAACTCA ATGTGCTGGA AGACATTTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009300317.1 |
CDS | 199..1860 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009302042.3 |
1 | ATGTCCGTCG ACAGGAGAGA CGAGAAAGAC GGGGAACTCA ATGTGCTGGA AGACATTTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa32354 | |
Clone ID Related Accession (Same CDS sequence) | NM_001007410.1 | |
Accession Version | NM_001007410.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2040bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-07-02 | |
Organism | Danio rerio(zebrafish) | |
Product | YTH domain-containing protein 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC085378.1. ##Evidence-Data-START## Transcript exon combination :: BC085378.1, BC165861.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA3505370 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTCCGTCG ACAGGAGAGA CGAGAAAGAC GGGGAACTCA ATGTGCTGGA AGACATTTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001007411.1 |
CDS | 163..2202 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001007410.1 |
1 | ATGTCCGTCG ACAGGAGAGA CGAGAAAGAC GGGGAACTCA ATGTGCTGGA AGACATTTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa41400 | |
Clone ID Related Accession (Same CDS sequence) | XM_021476130.1 | |
Accession Version | XM_021476130.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2037bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | YTH domain-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCGTCG ACAGGAGAGA CGAGAAAGAC GGGGAACTCA ATGTGCTGGA AGACATTTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021331805.1 |
CDS | 199..2235 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021476130.1 |
1 | ATGTCCGTCG ACAGGAGAGA CGAGAAAGAC GGGGAACTCA ATGTGCTGGA AGACATTTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Towards the understanding of the cocoa transcriptome: Production and analysis of an exhaustive dataset of ESTs of Theobroma cacao L. generated from various tissues and under various conditions. |