Gene Symbol | scrt1a |
Entrez Gene ID | 564658 |
Full Name | scratch family zinc finger 1a |
Synonyms | zgc:172288 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » scrt1a cDNA ORF clone
gRNAs
Gene Symbol | scrt1a |
Entrez Gene ID | 564658 |
Full Name | scratch family zinc finger 1a |
Synonyms | zgc:172288 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001113601.2 | NP_001107073.1 | scratch family zinc finger 1a |
NM_001113601.1 | NP_001107073.1 | scratch family zinc finger 1a |
Rattus norvegicus (Norway rat) | Scrt1 | NP_001124042.1 |
Danio rerio (zebrafish) | scrt1a | NP_001107073.1 |
Xenopus tropicalis (tropical clawed frog) | scrt1 | XP_004920080.1 |
Mus musculus (house mouse) | Scrt1 | NP_570963.1 |
Danio rerio (zebrafish) | scrt1b | NP_001014369.1 |
Homo sapiens (human) | SCRT1 | NP_112599.2 |
LOC714311 | XP_001103989.2 | |
Bos taurus (cattle) | SCRT1 | NP_001193752.1 |
Pan troglodytes (chimpanzee) | SCRT1 | XP_001156904.1 |
Canis lupus familiaris (dog) | SCRT1 | XP_005628369.1 |
Repression of Puma by scratch2 is required for neuronal survival during embryonic development.
Rodr?guez-Aznar E, Nieto MA
Cell death and differentiation18(7)1196-207(2011 Jul)
Neuron-specific expression of scratch genes during early zebrafish development.
Dam TM, Kim HT, Moon HY, Hwang KS, Jeong YM, You KH, Lee JS, Kim CH
Molecules and cells31(5)471-5(2011 May)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following scrt1a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the scrt1a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa03777 | |
Clone ID Related Accession (Same CDS sequence) | NM_001113601.2 , NM_001113601.1 | |
Accession Version | NM_001113601.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 840bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-31 | |
Organism | Danio rerio(zebrafish) | |
Product | scratch family zinc finger 1a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CABZ01079792.1. On Sep 12, 2018 this sequence version replaced NM_001113601.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC154637.1, EH578922.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168447, SAMEA2168448 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCCAAGGT CTTTCCTGGT CAAAAAGGTG AAGCTTGATG ATTTCTCATC CTCTGATCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001107073.1 |
CDS | 506..1345 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCAAGGT CTTTCCTGGT CAAAAAGGTG AAGCTTGATG ATTTCTCATC CTCTGATCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa03777 | |
Clone ID Related Accession (Same CDS sequence) | NM_001113601.2 , NM_001113601.1 | |
Accession Version | NM_001113601.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 840bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-25 | |
Organism | Danio rerio(zebrafish) | |
Product | scratch family zinc finger 1a | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC154637.1. On Jan 20, 2008 this sequence version replaced XM_687987.2. ##Evidence-Data-START## Transcript exon combination :: BC154637.1, BC171348.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168447, SAMEA2168448 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCCAAGGT CTTTCCTGGT CAAAAAGGTG AAGCTTGATG ATTTCTCATC CTCTGATCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001107073.1 |
CDS | 120..959 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCAAGGT CTTTCCTGGT CAAAAAGGTG AAGCTTGATG ATTTCTCATC CTCTGATCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Repression of Puma by scratch2 is required for neuronal survival during embryonic development. |
Neuron-specific expression of scratch genes during early zebrafish development. |