LOC107944162 cDNA ORF clone, Gossypium hirsutum(cotton)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107944162
Entrez Gene ID	107944162
Full Name	tRNA pseudouridine(38/39) synthase-like
Gene Type	protein-coding
Organism	Gossypium hirsutum(cotton)

mRNA and Protein(s)

mRNA	Protein	Name
XM_016877990.1	XP_016733479.1	tRNA pseudouridine(38/39) synthase-like

Pathways from BioSystems
Gene Ontology

The following LOC107944162 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107944162 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OGo17112	XM_016877990.1 Latest version!	Gossypium hirsutum tRNA pseudouridine(38/39) synthase-like (LOC107944162), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107944162 ( XM_016877990.1 ) cDNA ORF clone, Gossypium hirsutum(cotton) -> XP_016733479.1 Gossypium hirsutum tRNA pseudouridine(38/39) synthase-like (LOC107944162), mRNA.

Price & Availability↑

CloneID	OGo17112
Clone ID Related Accession (Same CDS sequence)	XM_016877990.1
Accession Version	XM_016877990.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 987bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-17
Organism	Gossypium hirsutum(cotton)
Product	tRNA pseudouridine(38/39) synthase-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015963860.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Gossypium hirsutum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACATTTT CATTAGAAAT CTTCTCATGT ATCAAATTCT ATCATCTCTC TTTCTTAACA 
GGTTATGATT TGAAAATTAT GACTCACCAT TCCAAGAGAT ATGTTGCTCT AAAAGTCATG 
TATTTTGGTC AGAGGTTTTA TGGTTTTGCT TCAGAAGCAC AAATGGATCC CACTGTTGAG 
TCTGAAATTT TCAATGCACT TGAGAAAACA AGGCTTTTAG TTGGTGACAA GAAGGAATCA 
CAGTACTCAA GGTGTGGCAG AACAGATAAG GGGGTGTCCT CTGTTGGCCA AGTGATTGCA 
TTGTTTTTAA GGTCAAACCT CAAAGAAACT GATCAAAACC ACAAAATTAC AGGAGAATTA 
TTTCCTGAGG CACGAATTGA AGGAGAAATT GATTATGTGA GAGTACTGAA CCGAGTCCTT 
CCAAGTGATA TTCGAACTTT AGGATGGAGT CCTGTTTCAA TTGATTTCAG TGCAAGGTTT 
AGTTGTTTGG CTAGAGAATA TAAGTACTTC TTTTGGAGAG GAAATTTGAA TCTCTCCGCT 
ATGGAGAATG CAGGAAAGAA ATTTCTTGGA GAACATGACT TCAGAAACTT TTGTAAGATG 
GATGCAGCAA ATGTACACAA CTACAGGCGT CGAATAACTC AGTTTGAAAT TTCTTCTTCT 
AATATGAGCT TTGAAGGTGG TCAGCTTTGT GCTATTAAAG TTAAAGGTAG TGCCTTCCTG 
TGGCATCAGG TGCGGTGCAT GGTTGCCGTG CTATTTATGA TAGGCCAAGG TCTTGAATCA 
GTTGATGTGA TAGATATATT ACTGGACATT GAGAAGACAC TGAGAAAACC TCAGTATGCT 
ATGGCTCCAG AGACACCATT GATCCTTCAA TCCTGTGAAT TTGAAGATGT CAAGTTTATT 
TGCTCCTCAG ATTCTGGGCA AGCACTTCGT ATACACTTGG AAAATGAGGG TCGAGCATAC 
CAGCTTCAGT CTGCAATTTT TCAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016733479.1
CDS	718..1704
Translation	MTFSLEIFSCIKFYHLSFLTGYDLKIMTHHSKRYVALKVMYFGQRFYGFASEAQMDPTVESEIFNALEKTRLLVGDKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKETDQNHKITGELFPEARIEGEIDYVRVLNRVLPSDIRTLGWSPVSIDFSARFSCLAREYKYFFWRGNLNLSAMENAGKKFLGEHDFRNFCKMDAANVHNYRRRITQFEISSSNMSFEGGQLCAIKVKGSAFLWHQVRCMVAVLFMIGQGLESVDVIDILLDIEKTLRKPQYAMAPETPLILQSCEFEDVKFICSSDSGQALRIHLENEGRAYQLQSAIFQ

Target ORF information:

RefSeq Version	XM_016877990.1
Organism	Gossypium hirsutum(cotton)
Definition	Gossypium hirsutum tRNA pseudouridine(38/39) synthase-like (LOC107944162), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016877990.1

ORF Insert Sequence:

ATGACATTTT CATTAGAAAT CTTCTCATGT ATCAAATTCT ATCATCTCTC TTTCTTAACA 
GGTTATGATT TGAAAATTAT GACTCACCAT TCCAAGAGAT ATGTTGCTCT AAAAGTCATG 
TATTTTGGTC AGAGGTTTTA TGGTTTTGCT TCAGAAGCAC AAATGGATCC CACTGTTGAG 
TCTGAAATTT TCAATGCACT TGAGAAAACA AGGCTTTTAG TTGGTGACAA GAAGGAATCA 
CAGTACTCAA GGTGTGGCAG AACAGATAAG GGGGTGTCCT CTGTTGGCCA AGTGATTGCA 
TTGTTTTTAA GGTCAAACCT CAAAGAAACT GATCAAAACC ACAAAATTAC AGGAGAATTA 
TTTCCTGAGG CACGAATTGA AGGAGAAATT GATTATGTGA GAGTACTGAA CCGAGTCCTT 
CCAAGTGATA TTCGAACTTT AGGATGGAGT CCTGTTTCAA TTGATTTCAG TGCAAGGTTT 
AGTTGTTTGG CTAGAGAATA TAAGTACTTC TTTTGGAGAG GAAATTTGAA TCTCTCCGCT 
ATGGAGAATG CAGGAAAGAA ATTTCTTGGA GAACATGACT TCAGAAACTT TTGTAAGATG 
GATGCAGCAA ATGTACACAA CTACAGGCGT CGAATAACTC AGTTTGAAAT TTCTTCTTCT 
AATATGAGCT TTGAAGGTGG TCAGCTTTGT GCTATTAAAG TTAAAGGTAG TGCCTTCCTG 
TGGCATCAGG TGCGGTGCAT GGTTGCCGTG CTATTTATGA TAGGCCAAGG TCTTGAATCA 
GTTGATGTGA TAGATATATT ACTGGACATT GAGAAGACAC TGAGAAAACC TCAGTATGCT 
ATGGCTCCAG AGACACCATT GATCCTTCAA TCCTGTGAAT TTGAAGATGT CAAGTTTATT 
TGCTCCTCAG ATTCTGGGCA AGCACTTCGT ATACACTTGG AAAATGAGGG TCGAGCATAC 
CAGCTTCAGT CTGCAATTTT TCAATAA