Gene Symbol | CSNK1A1 |
Entrez Gene ID | 1452 |
Full Name | casein kinase 1 alpha 1 |
Synonyms | CK1,CK1a,CKIa,HEL-S-77p,HLCDGP1,PRO2975 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
ORF » Species Summary » Homo sapiens » CSNK1A1 cDNA ORF clone
Gene Symbol | CSNK1A1 |
Entrez Gene ID | 1452 |
Full Name | casein kinase 1 alpha 1 |
Synonyms | CK1,CK1a,CKIa,HEL-S-77p,HLCDGP1,PRO2975 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
mRNA | Protein | Name |
---|---|---|
NM_001271741.1 | NP_001258670.1 | casein kinase I isoform alpha isoform 3 |
NM_001271741.2 | NP_001258670.1 | casein kinase I isoform alpha isoform 3 |
NM_001892.6 | NP_001883.4 | casein kinase I isoform alpha isoform 2 |
NM_001025105.3 | NP_001020276.1 | casein kinase I isoform alpha isoform 1 |
NM_001892.5 | NP_001883.4 | casein kinase I isoform alpha isoform 2 |
NM_001025105.2 | NP_001020276.1 | casein kinase I isoform alpha isoform 1 |
NM_001271742.1 | NP_001258671.1 | casein kinase I isoform alpha isoform 4 |
NM_001271742.2 | NP_001258671.1 | casein kinase I isoform alpha isoform 4 |
Bos taurus (cattle) | CSNK1A1 | NP_777136.1 |
Gallus gallus (chicken) | CSNK1A1 | NP_990384.1 |
Arabidopsis thaliana (thale cress) | ckl8 | NP_199146.1 |
Arabidopsis thaliana (thale cress) | ADK1 | NP_563695.2 |
Canis lupus familiaris (dog) | CSNK1A1 | XP_005619366.1 |
Schizosaccharomyces pombe (fission yeast) | hhp2 | NP_593184.1 |
Oryza sativa (rice) | Os02g0810400 | NP_001048470.1 |
Oryza sativa (rice) | Os04g0514800 | NP_001053309.1 |
Xenopus tropicalis (tropical clawed frog) | csnk1a1 | NP_001001221.1 |
CSNK1A1 | XP_001106904.1 | |
Rattus norvegicus (Norway rat) | Csnk1a1 | NP_446067.1 |
Danio rerio (zebrafish) | LOC100334765 | XP_002664490.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP000627 | XP_001238805.2 |
Arabidopsis thaliana (thale cress) | CKL13 | NP_171939.1 |
Arabidopsis thaliana (thale cress) | CKI1 | NP_193170.1 |
Arabidopsis thaliana (thale cress) | ckl7 | NP_199223.1 |
Pan troglodytes (chimpanzee) | CSNK1A1 | XP_001163959.1 |
Drosophila melanogaster (fruit fly) | CkIalpha | NP_001162737.1 |
Arabidopsis thaliana (thale cress) | ckl10 | NP_188976.1 |
Oryza sativa (rice) | Os02g0622100 | NP_001047465.1 |
Homo sapiens (human) | CSNK1A1 | NP_001020276.1 |
Mus musculus (house mouse) | Csnk1a1 | NP_666199.1 |
Arabidopsis thaliana (thale cress) | CKL6 | NP_567812.1 |
Casein kinase 1? mediates degradation of receptors for type I and type II interferons caused by hemagglutinin of influenza A virus.
Xia C, Wolf JJ, Vijayan M, Studstill CJ, Ma W, Hahm B
Journal of virology(2018 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Maintenance of the progenitors thus requires cooperation by PRMT1 and CSNK1a1 to sustain proliferation gene expression and suppress premature differentiation driven by GRHL3
Title: CSNK1a1 Regulates PRMT1 to Maintain the Progenitor State in Self-Renewing Somatic Tissue.
Disruption of CK1alpha function in myeloma cells resulted in decreased Mdm2, increased p53 and p21 and reduced expression of beta-catenin and AKT.
Title: Inactivation of CK1? in multiple myeloma empowers drug cytotoxicity by affecting AKT and ?-catenin survival signaling pathways.
casein kinase 1 phosphorylates the SQSTM1 S349 residue when harmful proteins accumulate under HSF1 stress
Title: HSF1 stress response pathway regulates autophagy receptor SQSTM1/p62-associated proteostasis.
CK1delta enhances EPO secretion from liver cancer cells under hypoxia by modifying HIF-2alpha and promoting its nuclear accumulation.
Title: HIF-2? phosphorylation by CK1? promotes erythropoietin secretion in liver cancer cells under hypoxia.
CKIalpha-mediated NS5A S235 phosphorylation is critical for HCV replication. CaMKII gamma and delta may have negative roles in the HCV life cycle.
Title: Phosphorylation of Serine 235 of the Hepatitis C Virus Non-Structural Protein NS5A by Multiple Kinases.
The following CSNK1A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CSNK1A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu03737 | |
Clone ID Related Accession (Same CDS sequence) | NM_001892.6 , NM_001892.5 | |
Accession Version | NM_001892.6 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1014bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-28 | |
Organism | Homo sapiens(human) | |
Product | casein kinase I isoform alpha isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DA144898.1, BC008717.2, L37042.1, BC009186.2, BU618830.1 and AC021078.5. On Jun 2, 2019 this sequence version replaced NM_001892.5. Transcript Variant: This variant (2) lacks an in-frame internal exon, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR7346977.1592500.1, SRR1803617.77686.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2467144 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGAGTA GCAGCGGCTC CAAGGCTGAA TTCATTGTCG GAGGGAAATA TAAACTGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001883.4 |
CDS | 476..1489 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001892.6 |
1 | ATGGCGAGTA GCAGCGGCTC CAAGGCTGAA TTCATTGTCG GAGGGAAATA TAAACTGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu03737 | |
Clone ID Related Accession (Same CDS sequence) | NM_001892.6 , NM_001892.5 | |
Accession Version | NM_001892.5 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1014bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-22 | |
Organism | Homo sapiens(human) | |
Product | casein kinase I isoform alpha isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DA144898.1, BC008717.2, L37042.1, BC009186.2 and BU618830.1. On Nov 14, 2012 this sequence version replaced NM_001892.4. Transcript Variant: This variant (2) lacks an in-frame internal exon, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1163657.255486.1, SRR1660805.96073.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2467144 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGAGTA GCAGCGGCTC CAAGGCTGAA TTCATTGTCG GAGGGAAATA TAAACTGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001883.4 |
CDS | 589..1602 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001892.5 |
1 | ATGGCGAGTA GCAGCGGCTC CAAGGCTGAA TTCATTGTCG GAGGGAAATA TAAACTGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu03879 | |
Clone ID Related Accession (Same CDS sequence) | NM_001271741.1 , NM_001271741.2 | |
Accession Version | NM_001271741.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 978bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-22 | |
Organism | Homo sapiens(human) | |
Product | casein kinase I isoform alpha isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DA144898.1, AF218004.1, BC009186.2, BC008717.2 and BU618830.1. Transcript Variant: This variant (3) lacks an in-frame internal exon and uses an alternate splice site, compared to variant 1. This results in a shorter protein (isoform 3), compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1660803.202858.1, SRR1803612.146050.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2467144 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGAGTA GCAGCGGCTC CAAGGCTGAA TTCATTGTCG GAGGGAAATA TAAACTGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001258670.1 |
CDS | 589..1566 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001271741.1 |
1 | ATGGCGAGTA GCAGCGGCTC CAAGGCTGAA TTCATTGTCG GAGGGAAATA TAAACTGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu03879 | |
Clone ID Related Accession (Same CDS sequence) | NM_001271741.1 , NM_001271741.2 | |
Accession Version | NM_001271741.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 978bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-29 | |
Organism | Homo sapiens(human) | |
Product | casein kinase I isoform alpha isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DA144898.1, AF218004.1, BC009186.2, BC008717.2, BU618830.1 and AC021078.5. On Jun 2, 2019 this sequence version replaced NM_001271741.1. Transcript Variant: This variant (3) lacks an in-frame internal exon and uses an alternate splice site, compared to variant 1. This results in a shorter protein (isoform 3), compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1803613.196450.1, SRR1803616.195679.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2467144 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGAGTA GCAGCGGCTC CAAGGCTGAA TTCATTGTCG GAGGGAAATA TAAACTGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001258670.1 |
CDS | 476..1453 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001271741.2 |
1 | ATGGCGAGTA GCAGCGGCTC CAAGGCTGAA TTCATTGTCG GAGGGAAATA TAAACTGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu03880 | |
Clone ID Related Accession (Same CDS sequence) | NM_001271742.1 , NM_001271742.2 | |
Accession Version | NM_001271742.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 831bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-12-14 | |
Organism | Homo sapiens(human) | |
Product | casein kinase I isoform alpha isoform 4 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from HY119498.1, AK293761.1, BC008717.2 and BU618830.1. Transcript Variant: This variant (4) differs in the 5' UTR and lacks a portion of the 5' coding region, compared to variant 1. These differences cause translation initiation at a downstream AUG and result in an isoform (4) with a shorter N-terminus, compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK293761.1, SRR1660809.157032.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGATCTTC TGGGACCTAG CCTCGAAGAC CTCTTCAATT TCTGTTCAAG AAGGTTCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001258671.1 |
CDS | 295..1125 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001271742.1 |
1 | ATGGATCTTC TGGGACCTAG CCTCGAAGAC CTCTTCAATT TCTGTTCAAG AAGGTTCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu03880 | |
Clone ID Related Accession (Same CDS sequence) | NM_001271742.1 , NM_001271742.2 | |
Accession Version | NM_001271742.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 831bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-28 | |
Organism | Homo sapiens(human) | |
Product | casein kinase I isoform alpha isoform 4 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC021078.5, HY119498.1, AK293761.1, BC008717.2 and BU618830.1. On Jun 2, 2019 this sequence version replaced NM_001271742.1. Transcript Variant: This variant (4) differs in the 5' UTR and lacks a portion of the 5' coding region, compared to variant 1. These differences cause translation initiation at a downstream AUG and result in an isoform (4) with a shorter N-terminus, compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK293761.1, SRR1660809.157032.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGATCTTC TGGGACCTAG CCTCGAAGAC CTCTTCAATT TCTGTTCAAG AAGGTTCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001258671.1 |
CDS | 329..1159 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001271742.2 |
1 | ATGGATCTTC TGGGACCTAG CCTCGAAGAC CTCTTCAATT TCTGTTCAAG AAGGTTCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu10853 | |
Clone ID Related Accession (Same CDS sequence) | NM_001025105.3 , NM_001025105.2 | |
Accession Version | NM_001025105.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-28 | |
Organism | Homo sapiens(human) | |
Product | casein kinase I isoform alpha isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DA144898.1, BC021971.2, DQ082865.1, AC021078.5, BC008717.2 and BU618830.1. On Jun 2, 2019 this sequence version replaced NM_001025105.2. Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1). Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1660803.209589.1, SRR1660805.257343.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGAGTA GCAGCGGCTC CAAGGCTGAA TTCATTGTCG GAGGGAAATA TAAACTGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001020276.1 |
CDS | 476..1573 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001025105.3 |
1 | ATGGCGAGTA GCAGCGGCTC CAAGGCTGAA TTCATTGTCG GAGGGAAATA TAAACTGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu10853 | |
Clone ID Related Accession (Same CDS sequence) | NM_001025105.3 , NM_001025105.2 | |
Accession Version | NM_001025105.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-12-14 | |
Organism | Homo sapiens(human) | |
Product | casein kinase I isoform alpha isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DA144898.1, BC021971.2, DQ082865.1, AC021078.5, BC008717.2 and BU618830.1. On Nov 14, 2012 this sequence version replaced NM_001025105.1. Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1). Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1660807.44960.1, SRR1660807.237050.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGAGTA GCAGCGGCTC CAAGGCTGAA TTCATTGTCG GAGGGAAATA TAAACTGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001020276.1 |
CDS | 589..1686 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001025105.2 |
1 | ATGGCGAGTA GCAGCGGCTC CAAGGCTGAA TTCATTGTCG GAGGGAAATA TAAACTGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Casein kinase 1? mediates degradation of receptors for type I and type II interferons caused by hemagglutinin of influenza A virus. |