Gene Symbol | RNF169 |
Entrez Gene ID | 254225 |
Full Name | ring finger protein 169 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » RNF169 cDNA ORF clone
Gene Symbol | RNF169 |
Entrez Gene ID | 254225 |
Full Name | ring finger protein 169 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_011544889.2 | XP_011543191.1 | E3 ubiquitin-protein ligase RNF169 isoform X1 |
NM_001098638.2 | NP_001092108.1 | E3 ubiquitin-protein ligase RNF169 |
XM_011544889.3 | XP_011543191.1 | E3 ubiquitin-protein ligase RNF169 isoform X1 |
NM_001098638.1 | NP_001092108.1 | E3 ubiquitin-protein ligase RNF169 |
Rattus norvegicus (Norway rat) | Rnf169 | XP_001061888.3 |
Canis lupus familiaris (dog) | RNF169 | XP_851632.2 |
Gallus gallus (chicken) | RNF169 | XP_417246.4 |
Xenopus tropicalis (tropical clawed frog) | LOC100493580 | XP_002944077.2 |
Bos taurus (cattle) | RNF169 | XP_002693509.1 |
Mus musculus (house mouse) | Rnf169 | NP_780597.2 |
Homo sapiens (human) | RNF169 | NP_001092108.1 |
Pan troglodytes (chimpanzee) | RNF169 | XP_522106.3 |
RNF169 | XP_001082831.1 | |
Danio rerio (zebrafish) | rnf169 | XP_001336012.2 |
Mechanisms of Ubiquitin-Nucleosome Recognition and Regulation of 53BP1 Chromatin Recruitment by RNF168/169 and RAD18.
Hu Q, Botuyan MV, Cui G, Zhao D, Mer G
Molecular cell66(4)473-487.e9(2017 May)
Dual-utility NLS drives RNF169-dependent DNA damage responses.
An L, Jiang Y, Ng HH, Man EP, Chen J, Khoo US, Gong Q, Huen MS
Proceedings of the National Academy of Sciences of the United States of America114(14)E2872-E2881(2017 Apr)
The RNF168 paralog RNF169 defines a new class of ubiquitylated histone reader involved in the response to DNA damage.
Kitevski-LeBlanc J, Fradet-Turcotte A, Kukic P, Wilson MD, Portella G, Yuwen T, Panier S, Duan S, Canny MD, van Ingen H, Arrowsmith CH, Rubinstein JL, Vendruscolo M, Durocher D, Kay LE
eLife6(2017 Apr)
Tandem protein interaction modules organize the ubiquitin-dependent response to DNA double-strand breaks.
Panier S, Ichijima Y, Fradet-Turcotte A, Leung CC, Kaustov L, Arrowsmith CH, Durocher D
Molecular cell47(3)383-95(2012 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Ubiquitin ligases RNF168, RNF169, and RAD18 specifically bind histone H2A Lys13/15-ubiquitylated nucleosomes. 53BP1 chromatin recruitment may be activated by RNF168 and blocked by RNF169 and RAD18.
Title: Mechanisms of Ubiquitin-Nucleosome Recognition and Regulation of 53BP1 Chromatin Recruitment by RNF168/169 and RAD18.
RNF168, its paralog RNF169, RAD18, and the BRCA1-interacting RAP80 protein accumulate at DNA double strand break sites through the use of bipartite modules composed of ubiquitin binding domains.
Title: Tandem protein interaction modules organize the ubiquitin-dependent response to DNA double-strand breaks.
RNF169 as a component in DNA damage signal transduction and adds to the complexity of regulatory ubiquitylation in genome stability maintenance.
Title: Ring finger protein RNF169 antagonizes the ubiquitin-dependent signaling cascade at sites of DNA damage.
results show that RNF169 functions in a noncanonical fashion to harness RNF168-mediated protein recruitment to DSB-containing chromatin, thereby contributing to regulation of DSB repair pathway utilization.
Title: Human RNF169 is a negative regulator of the ubiquitin-dependent response to DNA double-strand breaks.
The following RNF169 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RNF169 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu05869 | |
Clone ID Related Accession (Same CDS sequence) | NM_001098638.2 , NM_001098638.1 | |
Accession Version | NM_001098638.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2127bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-11-10 | |
Organism | Homo sapiens(human) | |
Product | E3 ubiquitin-protein ligase RNF169 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AP000560.4, AB082522.1 and BU735906.1. On Nov 23, 2018 this sequence version replaced NM_001098638.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AB082522.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000299563.5/ ENSP00000299563.4 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGGCGGCTG CAGGTCCGAG TACTCGGGCC TCTTCCGCGG CGGCAGCAGC CGCTCTGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001092108.1 |
CDS | 33..2159 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001098638.2 |
1 | ATGGCGGCTG CAGGTCCGAG TACTCGGGCC TCTTCCGCGG CGGCAGCAGC CGCTCTGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu05869 | |
Clone ID Related Accession (Same CDS sequence) | NM_001098638.2 , NM_001098638.1 | |
Accession Version | NM_001098638.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2127bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-09-10 | |
Organism | Homo sapiens(human) | |
Product | E3 ubiquitin-protein ligase RNF169 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AB082522.1, AP000560.4 and BU735906.1. On or before Jun 26, 2007 this sequence version replaced XM_495886.3, XM_940188.2. ##Evidence-Data-START## Transcript exon combination :: AB082522.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGGCTG CAGGTCCGAG TACTCGGGCC TCTTCCGCGG CGGCAGCAGC CGCTCTGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001092108.1 |
CDS | 14..2140 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001098638.1 |
1 | ATGGCGGCTG CAGGTCCGAG TACTCGGGCC TCTTCCGCGG CGGCAGCAGC CGCTCTGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu78266 | |
Clone ID Related Accession (Same CDS sequence) | XM_011544889.2 , XM_011544889.3 | |
Accession Version | XM_011544889.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2190bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | E3 ubiquitin-protein ligase RNF169 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011544889.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCTG CAGGTCCGAG TACTCGGGCC TCTTCCGCGG CGGCAGCAGC CGCTCTGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011543191.1 |
CDS | 26..2215 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011544889.2 |
1 | ATGGCGGCTG CAGGTCCGAG TACTCGGGCC TCTTCCGCGG CGGCAGCAGC CGCTCTGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu78266 | |
Clone ID Related Accession (Same CDS sequence) | XM_011544889.2 , XM_011544889.3 | |
Accession Version | XM_011544889.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2190bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | E3 ubiquitin-protein ligase RNF169 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_011544889.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCTG CAGGTCCGAG TACTCGGGCC TCTTCCGCGG CGGCAGCAGC CGCTCTGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011543191.1 |
CDS | 26..2215 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011544889.3 |
1 | ATGGCGGCTG CAGGTCCGAG TACTCGGGCC TCTTCCGCGG CGGCAGCAGC CGCTCTGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Mechanisms of Ubiquitin-Nucleosome Recognition and Regulation of 53BP1 Chromatin Recruitment by RNF168/169 and RAD18. |
Dual-utility NLS drives RNF169-dependent DNA damage responses. |
The RNF168 paralog RNF169 defines a new class of ubiquitylated histone reader involved in the response to DNA damage. |
Tandem protein interaction modules organize the ubiquitin-dependent response to DNA double-strand breaks. |