Gene Symbol | ARFIP1 |
Entrez Gene ID | 27236 |
Full Name | ADP ribosylation factor interacting protein 1 |
Synonyms | HSU52521 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
ORF » Species Summary » Homo sapiens » ARFIP1 cDNA ORF clone
gRNAs
Gene Symbol | ARFIP1 |
Entrez Gene ID | 27236 |
Full Name | ADP ribosylation factor interacting protein 1 |
Synonyms | HSU52521 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
mRNA | Protein | Name |
---|---|---|
XM_011531869.1 | XP_011530171.1 | arfaptin-1 isoform X1 |
XM_011531870.2 | XP_011530172.1 | arfaptin-1 isoform X2 |
NM_001287432.1 | NP_001274361.1 | arfaptin-1 isoform 1 |
NM_001025595.2 | NP_001020766.1 | arfaptin-1 isoform 1 |
NM_001287433.1 | NP_001274362.1 | arfaptin-1 isoform 2 |
XM_011531869.3 | XP_011530171.1 | arfaptin-1 isoform X2 |
XM_011531869.2 | XP_011530171.1 | arfaptin-1 isoform X2 |
XM_011531870.1 | XP_011530172.1 | arfaptin-1 isoform X1 |
XM_011531868.2 | XP_011530170.1 | arfaptin-1 isoform X1 |
NM_001025593.2 | NP_001020764.1 | arfaptin-1 isoform 2 |
NM_014447.3 | NP_055262.1 | arfaptin-1 isoform 2 |
NM_001025595.3 | NP_001020766.1 | arfaptin-1 isoform 1 |
XM_011531871.2 | XP_011530173.1 | arfaptin-1 isoform X3 |
NM_001287431.1 | NP_001274360.1 | arfaptin-1 isoform 1 |
XM_011531868.3 | XP_011530170.1 | arfaptin-1 isoform X1 |
XM_024453985.1 | XP_024309753.1 | arfaptin-1 isoform X4 |
XM_011531872.1 | XP_011530174.1 | arfaptin-1 isoform X5 |
Mus musculus (house mouse) | Arfip1 | NP_001074562.1 |
Rattus norvegicus (Norway rat) | Arfip1 | NP_068531.1 |
Gallus gallus (chicken) | ARFIP1 | NP_001239327.1 |
ARFIP1 | XP_002804270.1 | |
Bos taurus (cattle) | ARFIP1 | NP_001077119.1 |
Canis lupus familiaris (dog) | ARFIP1 | XP_005629406.1 |
Xenopus tropicalis (tropical clawed frog) | arfip1 | NP_001011459.1 |
Homo sapiens (human) | ARFIP1 | NP_001274361.1 |
Pan troglodytes (chimpanzee) | ARFIP1 | XP_001146574.2 |
Danio rerio (zebrafish) | arfip1 | NP_998533.1 |
E-cadherin interactome complexity and robustness resolved by quantitative proteomics.
Guo Z, Neilson LJ, Zhong H, Murray PS, Zanivan S, Zaidel-Bar R
Science signaling7(354)rs7(2014 Dec)
Recruitment of arfaptins to the trans-Golgi network by PI(4)P and their involvement in cargo export.
Cruz-Garcia D, Ortega-Bellido M, Scarpa M, Villeneuve J, Jovic M, Porzner M, Balla T, Seufferlein T, Malhotra V
The EMBO journal32(12)1717-29(2013 Jun)
Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags.
Wang AG, Yoon SY, Oh JH, Jeon YJ, Kim M, Kim JM, Byun SS, Yang JO, Kim JH, Kim DG, Yeom YI, Yoo HS, Kim YS, Kim NS
Biochemical and biophysical research communications345(3)1022-32(2006 Jul)
Insulin-dependent interactions of proteins with GLUT4 revealed through stable isotope labeling by amino acids in cell culture (SILAC).
Foster LJ, Rudich A, Talior I, Patel N, Huang X, Furtado LM, Bilan PJ, Mann M, Klip A
Journal of proteome research5(1)64-75(2006 Jan)
Arfaptin 1 inhibits ADP-ribosylation factor-dependent matrix metalloproteinase-9 secretion induced by phorbol ester in HT 1080 fibrosarcoma cells.
Ho WT, Exton JH, Williger BT
FEBS letters537(1-3)91-5(2003 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The binding of arfaptin1, but not arfaptin2, to PI(4)P is regulated by protein kinase D (PKD) mediated phosphorylation at Ser100 within the AH.
Title: Recruitment of arfaptins to the trans-Golgi network by PI(4)P and their involvement in cargo export.
inhibits ADP-ribosylation factor-dependent matrix metalloproteinase-9 secretion induced by phorbol ester in fibrosarcoma cells
Title: Arfaptin 1 inhibits ADP-ribosylation factor-dependent matrix metalloproteinase-9 secretion induced by phorbol ester in HT 1080 fibrosarcoma cells.
The following ARFIP1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ARFIP1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu00961![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_011531869.1 , XM_011531870.2 , NM_001287432.1 , NM_001025595.2 , XM_011531869.3 , XM_011531869.2 , XM_011531870.1 , NM_001025595.3 , NM_001287431.1 | |
Accession Version | NM_001287432.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1122bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-21 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK304141.1, BC105114.1, AU139844.1, BC103759.1, AK299600.1, AK096509.1 and AI634366.1. On Dec 14, 2013 this sequence version replaced XM_005262929.1. Transcript Variant: This variant (5) differs in the 5' UTR, compared to variant 1. Variants 1, 4, and 5 encode the same isoform (1). ##Evidence-Data-START## Transcript exon combination :: SRR1660807.131492.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1966682, SAMEA1968540 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001274361.1 |
CDS | 417..1538 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00961![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_011531869.1 , XM_011531870.2 , NM_001287432.1 , NM_001025595.2 , XM_011531869.3 , XM_011531869.2 , XM_011531870.1 , NM_001025595.3 , NM_001287431.1 | |
Accession Version | NM_001025595.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1122bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-02 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK304141.1, DC346238.1, BC105114.1, BC103759.1, AK299600.1, AK096509.1 and AI634366.1. On Dec 14, 2013 this sequence version replaced NM_001025595.1. Transcript Variant: This variant (1) encodes the longer isoform (1). Variants 1, 4, and 5 encode the same isoform. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001020766.1 |
CDS | 300..1421 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00961![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_011531869.1 , XM_011531870.2 , NM_001287432.1 , NM_001025595.2 , XM_011531869.3 , XM_011531869.2 , XM_011531870.1 , NM_001025595.3 , NM_001287431.1 | |
Accession Version | NM_001025595.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1122bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-23 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK304141.1, DC346238.1, BC105114.1, BC103759.1, AK299600.1, AK096509.1, AI634366.1 and AC099339.6. On Nov 22, 2018 this sequence version replaced NM_001025595.2. Transcript Variant: This variant (1) encodes the longer isoform (1). Variants 1, 4, and 5 encode the same isoform. ##Evidence-Data-START## Transcript exon combination :: SRR1660807.176730.1, SRR1660805.57770.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000353617.7/ ENSP00000296557.4 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001020766.1 |
CDS | 283..1404 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00961![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_011531869.1 , XM_011531870.2 , NM_001287432.1 , NM_001025595.2 , XM_011531869.3 , XM_011531869.2 , XM_011531870.1 , NM_001025595.3 , NM_001287431.1 | |
Accession Version | NM_001287431.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1122bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-20 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK304141.1, BC103759.1, AK299600.1, AK096509.1 and AI634366.1. On Dec 14, 2013 this sequence version replaced XM_005262928.1. Transcript Variant: This variant (4) differs in the 5' UTR, compared to variant 1. Variants 1, 4, and 5 encode the same isoform (1). ##Evidence-Data-START## Transcript exon combination :: AK304141.1, SRR1660803.176372.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001274360.1 |
CDS | 165..1286 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu01032![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_001287433.1 , NM_001025593.2 , NM_014447.3 , XM_024453985.1 | |
Accession Version | NM_001287433.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-05 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK304141.1, DA452239.1, BC105114.1, BC103759.1, AK299600.1, AK096509.1 and AI634366.1. Transcript Variant: This variant (6) differs in the 5' UTR and lacks an in-frame exon in the central coding region, compared to variant 1. The encoded isoform (2) is shorter, compared to isoform 1. Variants 2, 3, and 6 encode the same isoform. ##Evidence-Data-START## CDS exon combination :: SRR1803615.56724.1, SRR1660807.223643.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMEA1968540, SAMEA1968832 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001274362.1 |
CDS | 282..1307 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu01032![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_001287433.1 , NM_001025593.2 , NM_014447.3 , XM_024453985.1 | |
Accession Version | NM_001025593.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-05 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK304141.1, BC105114.1, BC103759.1, AK299600.1, AK096509.1 and AI634366.1. On Dec 14, 2013 this sequence version replaced NM_001025593.1. Transcript Variant: This variant (2) lacks an in-frame exon in the central coding region, compared to variant 1. The encoded isoform (2) is shorter, compared to isoform 1. Variants 2, 3, and 6 encode the same isoform. ##Evidence-Data-START## Transcript exon combination :: SRR1660807.196858.1, SRR1660809.247771.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001020764.1 |
CDS | 300..1325 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu01032![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_001287433.1 , NM_001025593.2 , NM_014447.3 , XM_024453985.1 | |
Accession Version | NM_014447.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-04 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK304141.1, AK290472.1, AK299600.1, AK096509.1 and AI634366.1. On Dec 14, 2013 this sequence version replaced NM_014447.2. Transcript Variant: This variant (3) differs in the 5' UTR and lacks an in-frame exon in the central coding region, compared to variant 1. The encoded isoform (2) is shorter, compared to isoform 1. Variants 2, 3, and 6 encode the same isoform. ##Evidence-Data-START## Transcript exon combination :: SRR1803615.56724.1, SRR1660805.28255.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_055262.1 |
CDS | 165..1190 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00961![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_011531869.1 , XM_011531870.2 , NM_001287432.1 , NM_001025595.2 , XM_011531869.3 , XM_011531869.2 , XM_011531870.1 , NM_001025595.3 , NM_001287431.1 | |
Accession Version | XM_011531869.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1122bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-03-11 | |
Organism | Homo sapiens(Human) | |
Product | arfaptin-1 isoform X1 | |
Comment |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011530171.1 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00961![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_011531869.1 , XM_011531870.2 , NM_001287432.1 , NM_001025595.2 , XM_011531869.3 , XM_011531869.2 , XM_011531870.1 , NM_001025595.3 , NM_001287431.1 | |
Accession Version | XM_011531870.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1122bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000004.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011531870.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011530172.1 |
CDS | 179..1300 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00961![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_011531869.1 , XM_011531870.2 , NM_001287432.1 , NM_001025595.2 , XM_011531869.3 , XM_011531869.2 , XM_011531870.1 , NM_001025595.3 , NM_001287431.1 | |
Accession Version | XM_011531869.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1122bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000004.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_011531869.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011530171.1 |
CDS | 127..1248 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00961![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_011531869.1 , XM_011531870.2 , NM_001287432.1 , NM_001025595.2 , XM_011531869.3 , XM_011531869.2 , XM_011531870.1 , NM_001025595.3 , NM_001287431.1 | |
Accession Version | XM_011531869.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1122bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000004.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011531869.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011530171.1 |
CDS | 314..1435 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00961![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_011531869.1 , XM_011531870.2 , NM_001287432.1 , NM_001025595.2 , XM_011531869.3 , XM_011531869.2 , XM_011531870.1 , NM_001025595.3 , NM_001287431.1 | |
Accession Version | XM_011531870.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1122bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-03-11 | |
Organism | Homo sapiens(Human) | |
Product | arfaptin-1 isoform X1 | |
Comment |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011530172.1 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu01032![]() |
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Clone ID Related Accession (Same CDS sequence) | NM_001287433.1 , NM_001025593.2 , NM_014447.3 , XM_024453985.1 | |
Accession Version | XM_024453985.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000004.12) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024309753.1 |
CDS | 278..1303 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGGCTCAAG AATCTCCCAA AAATTCAGCA GCAGAAATTC CAGTGACTAG TAATGGAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu67155 | |
Clone ID Related Accession (Same CDS sequence) | XM_011531872.1 | |
Accession Version | XM_011531872.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 891bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000004.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTCCTA GCAGGGTTGC AGCTAGTCGA CTGGCTCAGC AAGGAAGTGA TTTAATTGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011530174.1 |
CDS | 203..1093 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGTCTCCTA GCAGGGTTGC AGCTAGTCGA CTGGCTCAGC AAGGAAGTGA TTTAATTGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu67153 | |
Clone ID Related Accession (Same CDS sequence) | XM_011531868.2 , XM_011531868.3 | |
Accession Version | XM_011531868.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1140bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000004.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011531868.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGTATGT TTTGTCCTAG GTTTAAAAAA AAAAAAAGGA TAACTATCTT TGGAGAAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011530170.1 |
CDS | 3109..4248 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTGTATGT TTTGTCCTAG GTTTAAAAAA AAAAAAAGGA TAACTATCTT TGGAGAAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu67153 | |
Clone ID Related Accession (Same CDS sequence) | XM_011531868.2 , XM_011531868.3 | |
Accession Version | XM_011531868.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1140bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000004.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_011531868.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGTATGT TTTGTCCTAG GTTTAAAAAA AAAAAAAGGA TAACTATCTT TGGAGAAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011530170.1 |
CDS | 3110..4249 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTGTATGT TTTGTCCTAG GTTTAAAAAA AAAAAAAGGA TAACTATCTT TGGAGAAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu67154 | |
Clone ID Related Accession (Same CDS sequence) | XM_011531871.2 | |
Accession Version | XM_011531871.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1044bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | arfaptin-1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000004.12) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011531871.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGTATGT TTTGTCCTAG GTTTAAAAAA AAAAAAAGGA TAACTATCTT TGGAGAAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011530173.1 |
CDS | 3111..4154 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGTGTATGT TTTGTCCTAG GTTTAAAAAA AAAAAAAGGA TAACTATCTT TGGAGAAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
E-cadherin interactome complexity and robustness resolved by quantitative proteomics. |
Recruitment of arfaptins to the trans-Golgi network by PI(4)P and their involvement in cargo export. |
Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags. |
Insulin-dependent interactions of proteins with GLUT4 revealed through stable isotope labeling by amino acids in cell culture (SILAC). |
Arfaptin 1 inhibits ADP-ribosylation factor-dependent matrix metalloproteinase-9 secretion induced by phorbol ester in HT 1080 fibrosarcoma cells. |