Gene Symbol | OGFOD3 |
Entrez Gene ID | 79701 |
Full Name | 2-oxoglutarate and iron dependent oxygenase domain containing 3 |
Synonyms | C17orf101 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » OGFOD3 cDNA ORF clone
gRNAs
Gene Symbol | OGFOD3 |
Entrez Gene ID | 79701 |
Full Name | 2-oxoglutarate and iron dependent oxygenase domain containing 3 |
Synonyms | C17orf101 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_024648.2 | NP_078924.1 | 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 isoform 1 |
NM_175902.5 | NP_787098.3 | 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 isoform 2 |
NM_175902.4 | NP_787098.3 | 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 isoform 2 |
NM_024648.3 | NP_078924.1 | 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 isoform 1 |
OGFOD3 | XP_001113352.1 | |
Pan troglodytes (chimpanzee) | OGFOD3 | XP_511762.2 |
Rattus norvegicus (Norway rat) | Ogfod3 | NP_001013998.1 |
Danio rerio (zebrafish) | zgc:195081 | NP_001124244.1 |
Mus musculus (house mouse) | Ogfod3 | NP_079678.1 |
Gallus gallus (chicken) | LOC769717 | XP_003642371.2 |
Xenopus tropicalis (tropical clawed frog) | ogfod3 | NP_001011105.1 |
Homo sapiens (human) | OGFOD3 | NP_078924.1 |
Canis lupus familiaris (dog) | OGFOD3 | XP_005642221.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP009177 | XP_553109.2 |
Bos taurus (cattle) | OGFOD3 | XP_002696154.1 |
Defining the membrane proteome of NK cells.
Ghosh D, Lippert D, Krokhin O, Cortens JP, Wilkins JA
Journal of mass spectrometry : JMS45(1)1-25(2010 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following OGFOD3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the OGFOD3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu00117![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_024648.2 , NM_024648.3 | |
Accession Version | NM_024648.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 960bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Homo sapiens(human) | |
Product | 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK311057.1, AK025875.1 and AC132938.9. On Feb 3, 2010 this sequence version replaced NM_024648.1. Transcript Variant: This variant (1) encodes isoform (1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1163655.604250.1, AK025875.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCCTC AGCGGAGGGC CGCAACCAAG GCGCCCGAGG GCAACGGAGC GGCCGAGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_078924.1 |
CDS | 153..1112 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCCTC AGCGGAGGGC CGCAACCAAG GCGCCCGAGG GCAACGGAGC GGCCGAGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00117![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_024648.2 , NM_024648.3 | |
Accession Version | NM_024648.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 960bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-01 | |
Organism | Homo sapiens(human) | |
Product | 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK025875.1 and AC132938.9. On Nov 22, 2018 this sequence version replaced NM_024648.2. Transcript Variant: This variant (1) encodes isoform (1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK025875.1, SRR1163655.604250.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000313056.10/ ENSP00000320116.5 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGGCTCCTC AGCGGAGGGC CGCAACCAAG GCGCCCGAGG GCAACGGAGC GGCCGAGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_078924.1 |
CDS | 102..1061 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCCTC AGCGGAGGGC CGCAACCAAG GCGCCCGAGG GCAACGGAGC GGCCGAGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00873 | |
Clone ID Related Accession (Same CDS sequence) | NM_175902.5 , NM_175902.4 | |
Accession Version | NM_175902.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 996bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK311057.1, BC023602.2 and AC132938.9. On May 31, 2019 this sequence version replaced NM_175902.4. Transcript Variant: This variant (2) has an alternate exon in the coding region, which results in a frameshift, compared to variant 1. The resulting isoform (2) has a distinct C-terminus and is longer than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC023602.2, SRR1163655.156259.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCCTC AGCGGAGGGC CGCAACCAAG GCGCCCGAGG GCAACGGAGC GGCCGAGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_787098.3 |
CDS | 102..1097 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCCTC AGCGGAGGGC CGCAACCAAG GCGCCCGAGG GCAACGGAGC GGCCGAGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00873 | |
Clone ID Related Accession (Same CDS sequence) | NM_175902.5 , NM_175902.4 | |
Accession Version | NM_175902.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 996bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-22 | |
Organism | Homo sapiens(human) | |
Product | 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK311057.1, BC023602.2 and AC132938.9. On Feb 3, 2010 this sequence version replaced NM_175902.3. Transcript Variant: This variant (2) has an alternate exon in the coding region, which results in a frameshift, compared to variant 1. The resulting isoform (2) has a distinct C-terminus and is longer than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC023602.2, SRR1163655.156259.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCCTC AGCGGAGGGC CGCAACCAAG GCGCCCGAGG GCAACGGAGC GGCCGAGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_787098.3 |
CDS | 153..1148 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCCTC AGCGGAGGGC CGCAACCAAG GCGCCCGAGG GCAACGGAGC GGCCGAGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Defining the membrane proteome of NK cells. |