LINJ_23_1940 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_23_1940
Entrez Gene ID	10966336
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_003392469.1	XP_003392517.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_23_1940 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_23_1940 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc07628	XM_003392469.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_23_1940 ( XM_003392469.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_003392517.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc07628
Clone ID Related Accession (Same CDS sequence)	XM_003392469.1
Accession Version	XM_003392469.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2898bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009407). COMPLETENESS: incomplete on both ends.

ATGCTACCCG CCTCCCTGAC GTTTGAGCCG CCATCCGTGG TGGCAGTCTT CGCGTCGCAT 
GCGGTGTTGT GCTGGGAGCA GCCGCGCACT CCACACACCA CGTCCTTCGC GGAGCACATT 
GCGTGGGAGT ATCAGATCGA GTACAACTGC TCCTGCAGAG TTAGACAGCA GCCGTACCGC 
ACCACGGGCG GCAACGCCTT TGCTCTCCTG GCCACCCCGC ACGAAGGTGA GACGTACTAC 
GTGCGAGTCG TGGCCAAGGC CCGCTTTGCA GGATCCACTG CTGGTCTCGT CTCTGCCAAG 
GCCGCGTTCA CGGCGTCCTG CAATGTGGCC ATACCCTGGC GCTGCTCTGC CCGACCGCCG 
GTGTGCGTCT TCGATGCGCT CTACCTTAGC GCAAACGTGG AGACGGAGGA CATTGCGGCG 
CTGAGTGCCG CGCGCAGCTC CACCATCGAC AACGCGGCAG CGCTCGACGG GAAGAGTGTC 
TGCTACACCC TTGAAGGCGA TATTGCTGTG CACACGTATC GCATGCTCTA CAGCGGCACC 
GCCGCACTGC CGGTCGGGCA GGCAAGAACG GTATACTACA TGGTGGCTAC GACGCGGCTG 
CACACAGGCA AGCGCACCCG CGCAATGGAG TTGCTGAGCA TGATACAGCG CGAGGGGGCG 
TCGATCGTGT TCTGCGGGAT TGGCGACGGT GGCCGTCTAG CCCTGCGCGC CGCCCTGACC 
TTCTTGTCGT TCCTCACGAC GGCGTGCCCT GCTCTGTGCG CATCGGTCCT GTGCATCACC 
TACGGAACGC CCCGTCTGCT GCTAAAGGAG GGACCGCGTC TACTGGCACA CACCCTCCCT 
CTAAGTGGGC AGCTCCTGCA CTTCACGCAG CTGCCACTGA TCGAGCACAC GCCTCTTGTG 
AGCGACATGG TGGCCCTATC GCAGCGGGGC TCTGGCGTCG CCGTCGACAC ACCACCGCTA 
GGCTACGCAA ACGGGTTTTA CCGCAACATG CTATTAGGGG TGCAGTGCCG GGTGACAGAC 
GGGACTGGAC TGCACTTCCG CCTTTCATCG CCAGACGAGC TGTCTACCGA GGCGGAGGAG 
GCGGAGGCGT TTGACGTTGT AGGGCAGCTG CGCGCGTTAT CACAGCTCTT CTTTCCATCT 
TCGCCGCCGT GGCTGTCGCC GTCTGTTACG TCCGTCAGCT GCTGCACGGA AGGACCGCTG 
CTGCACGTGA GTGTAGAGGG GGCTAACTTG CATTACTGTC CTCGGGTGAC GTTGACACCG 
TCGTATCCTC GCGGCACCCC GCTCTTCCCA CGTGTCGTCG CTAGCACTCC GCTTCATCTC 
GAGTGCACTG CCTGCCTCCT GCCTTGGGTG CAGCAGCATG CTGCTGGTCA CGGCTTGCGT 
GACGCGGCTC CATTGAACAT ATCGGCGTTT CTCCTCGTGC AGACGTCCCT GGGTACAGCC 
TTTGCTCCGG CGCCGGCGAC GGTGGTGCTC CCGGAGGACT TGCTCGAACT GTTTTGCGCG 
GCGCAGCAGG GCTCTGCACC ATGGAGTACC GAAGCTGCTC CGGGGCTTGT TGAGTGCGCC 
TTGCAGCTGC AGCCGCTTTA TGTCTTAGCC GGCACTGGCG GCGTTGCTTT TCCAAGTGCC 
GCAGGCAACG CGCTGCACAA TCCGCTTTTC GAGTCCCTGT GCGCTCTTGC ATCTGCGGCT 
GAGGTCACCC TTTCGTCTGC ATACGCCGGT GCGCCGGCCA AGCCTGGTAG CGGATTGCTG 
GGCTTCATTA GCAGTGTGGG AGCTCGACTG TCTGCCAGGG CGGCGGACGC ACTCACCGAC 
GCGGTACCAG CACTGCGTGT GCCCGGCATC GAGGCAGCCT ACCTGAAGAA CGCGCTTAAG 
GAGTGGACGG GCACTGACTT CACAGGCGCC GAGATGTGGA GGTCGCGATG CGCGTCGTGG 
AGGCAGCGCA TCTTCGGCGG GCTGTCGCTT CTCAGTGGCA TCTCGTACCG CAACACGCTT 
GTGCAAATGC TCAGCGTGCT CGACGGCGAC GCGGAGGTGG ACGAGGATGC CCCGCTCGCT 
TGCATCGAGG CGTGCTTGTA CGCCCACACA AAGTACCACA TCAAAGCAGC GCAATCTTCA 
CTGGTGCACA TGGACCAGTT GCTGTACACT GAGCTCTCTC TTAGCAGCTT TTACGGCGCG 
GTTGCCCACA TCTTCAAGAG TGAGGCCAGC TCGGCTTCCG GCTCACCGCT GCCGTATCTC 
CGCGAGTCGA TGCTACTGTG GGCACTGTGC CACTGCTTCG AGCTGAGGCG TGAGGTGGCG 
CGAACGACAT TCTGCTGCAA TGTGGGGTGT GCAGGGTGCG GCGTCTCGAC GCTCTCCTCA 
TGCATCTCGT CACTGTTGCA CCACGAGGAG GCCCGGCGCC ATGGACGCCG TGGGACGTGC 
TTCCGCACCG TCCAGTGCCG CATCGCGTCG AGTGGCCTAT CGGCTGTTTA CTTCGCTGCG 
CAGACGGGTG TGCGGTGTTG CGTCTTCCTG GCTGCGGAGG CGGCAGACTT GACGAGAGCC 
GAGTACACCT CAATGAGCGT TCACATTCAA GAGCACTTGA CCTACGCTGG GCAGCATGTG 
TTCCGGGTGA TTACAAAGGC AGACGAGCAC CTGCAGAGCA TCTCGGACCT GCGCAAGGAG 
CTTGAGAACG ACACTTCAGT GGCTGCCTTG ATGTCACGGG TTGGCGCACA GATGTTGGGC 
GGGTGCGGCA CAGAGGAGCA GCGGCTGGTG GTTGCTCTCG CCCCATCAAC CTCTCGACTT 
GTGGAGCTTA TTGCCTGTAC CCCCGCCGAG GTGGAGCAGT ACGCGCAGAG GCTGCGCTCA 
TACTCGGAGG CACTGCTCTT GGACTGTCTC CGCCTTAGCG TTCTTCGAGG GGACGCTGAC 
TGCACGAGGA CGGCTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003392517.1
CDS	1..2898
Translation	MLPASLTFEPPSVVAVFASHAVLCWEQPRTPHTTSFAEHIAWEYQIEYNCSCRVRQQPYRTTGGNAFALLATPHEGETYYVRVVAKARFAGSTAGLVSAKAAFTASCNVAIPWRCSARPPVCVFDALYLSANVETEDIAALSAARSSTIDNAAALDGKSVCYTLEGDIAVHTYRMLYSGTAALPVGQARTVYYMVATTRLHTGKRTRAMELLSMIQREGASIVFCGIGDGGRLALRAALTFLSFLTTACPALCASVLCITYGTPRLLLKEGPRLLAHTLPLSGQLLHFTQLPLIEHTPLVSDMVALSQRGSGVAVDTPPLGYANGFYRNMLLGVQCRVTDGTGLHFRLSSPDELSTEAEEAEAFDVVGQLRALSQLFFPSSPPWLSPSVTSVSCCTEGPLLHVSVEGANLHYCPRVTLTPSYPRGTPLFPRVVASTPLHLECTACLLPWVQQHAAGHGLRDAAPLNISAFLLVQTSLGTAFAPAPATVVLPEDLLELFCAAQQGSAPWSTEAAPGLVECALQLQPLYVLAGTGGVAFPSAAGNALHNPLFESLCALASAAEVTLSSAYAGAPAKPGSGLLGFISSVGARLSARAADALTDAVPALRVPGIEAAYLKNALKEWTGTDFTGAEMWRSRCASWRQRIFGGLSLLSGISYRNTLVQMLSVLDGDAEVDEDAPLACIEACLYAHTKYHIKAAQSSLVHMDQLLYTELSLSSFYGAVAHIFKSEASSASGSPLPYLRESMLLWALCHCFELRREVARTTFCCNVGCAGCGVSTLSSCISSLLHHEEARRHGRRGTCFRTVQCRIASSGLSAVYFAAQTGVRCCVFLAAEAADLTRAEYTSMSVHIQEHLTYAGQHVFRVITKADEHLQSISDLRKELENDTSVAALMSRVGAQMLGGCGTEEQRLVVALAPSTSRLVELIACTPAEVEQYAQRLRSYSEALLLDCLRLSVLRGDADCTRTA

Target ORF information:

RefSeq Version	XM_003392469.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003392469.1

ORF Insert Sequence:

ATGCTACCCG CCTCCCTGAC GTTTGAGCCG CCATCCGTGG TGGCAGTCTT CGCGTCGCAT 
GCGGTGTTGT GCTGGGAGCA GCCGCGCACT CCACACACCA CGTCCTTCGC GGAGCACATT 
GCGTGGGAGT ATCAGATCGA GTACAACTGC TCCTGCAGAG TTAGACAGCA GCCGTACCGC 
ACCACGGGCG GCAACGCCTT TGCTCTCCTG GCCACCCCGC ACGAAGGTGA GACGTACTAC 
GTGCGAGTCG TGGCCAAGGC CCGCTTTGCA GGATCCACTG CTGGTCTCGT CTCTGCCAAG 
GCCGCGTTCA CGGCGTCCTG CAATGTGGCC ATACCCTGGC GCTGCTCTGC CCGACCGCCG 
GTGTGCGTCT TCGATGCGCT CTACCTTAGC GCAAACGTGG AGACGGAGGA CATTGCGGCG 
CTGAGTGCCG CGCGCAGCTC CACCATCGAC AACGCGGCAG CGCTCGACGG GAAGAGTGTC 
TGCTACACCC TTGAAGGCGA TATTGCTGTG CACACGTATC GCATGCTCTA CAGCGGCACC 
GCCGCACTGC CGGTCGGGCA GGCAAGAACG GTATACTACA TGGTGGCTAC GACGCGGCTG 
CACACAGGCA AGCGCACCCG CGCAATGGAG TTGCTGAGCA TGATACAGCG CGAGGGGGCG 
TCGATCGTGT TCTGCGGGAT TGGCGACGGT GGCCGTCTAG CCCTGCGCGC CGCCCTGACC 
TTCTTGTCGT TCCTCACGAC GGCGTGCCCT GCTCTGTGCG CATCGGTCCT GTGCATCACC 
TACGGAACGC CCCGTCTGCT GCTAAAGGAG GGACCGCGTC TACTGGCACA CACCCTCCCT 
CTAAGTGGGC AGCTCCTGCA CTTCACGCAG CTGCCACTGA TCGAGCACAC GCCTCTTGTG 
AGCGACATGG TGGCCCTATC GCAGCGGGGC TCTGGCGTCG CCGTCGACAC ACCACCGCTA 
GGCTACGCAA ACGGGTTTTA CCGCAACATG CTATTAGGGG TGCAGTGCCG GGTGACAGAC 
GGGACTGGAC TGCACTTCCG CCTTTCATCG CCAGACGAGC TGTCTACCGA GGCGGAGGAG 
GCGGAGGCGT TTGACGTTGT AGGGCAGCTG CGCGCGTTAT CACAGCTCTT CTTTCCATCT 
TCGCCGCCGT GGCTGTCGCC GTCTGTTACG TCCGTCAGCT GCTGCACGGA AGGACCGCTG 
CTGCACGTGA GTGTAGAGGG GGCTAACTTG CATTACTGTC CTCGGGTGAC GTTGACACCG 
TCGTATCCTC GCGGCACCCC GCTCTTCCCA CGTGTCGTCG CTAGCACTCC GCTTCATCTC 
GAGTGCACTG CCTGCCTCCT GCCTTGGGTG CAGCAGCATG CTGCTGGTCA CGGCTTGCGT 
GACGCGGCTC CATTGAACAT ATCGGCGTTT CTCCTCGTGC AGACGTCCCT GGGTACAGCC 
TTTGCTCCGG CGCCGGCGAC GGTGGTGCTC CCGGAGGACT TGCTCGAACT GTTTTGCGCG 
GCGCAGCAGG GCTCTGCACC ATGGAGTACC GAAGCTGCTC CGGGGCTTGT TGAGTGCGCC 
TTGCAGCTGC AGCCGCTTTA TGTCTTAGCC GGCACTGGCG GCGTTGCTTT TCCAAGTGCC 
GCAGGCAACG CGCTGCACAA TCCGCTTTTC GAGTCCCTGT GCGCTCTTGC ATCTGCGGCT 
GAGGTCACCC TTTCGTCTGC ATACGCCGGT GCGCCGGCCA AGCCTGGTAG CGGATTGCTG 
GGCTTCATTA GCAGTGTGGG AGCTCGACTG TCTGCCAGGG CGGCGGACGC ACTCACCGAC 
GCGGTACCAG CACTGCGTGT GCCCGGCATC GAGGCAGCCT ACCTGAAGAA CGCGCTTAAG 
GAGTGGACGG GCACTGACTT CACAGGCGCC GAGATGTGGA GGTCGCGATG CGCGTCGTGG 
AGGCAGCGCA TCTTCGGCGG GCTGTCGCTT CTCAGTGGCA TCTCGTACCG CAACACGCTT 
GTGCAAATGC TCAGCGTGCT CGACGGCGAC GCGGAGGTGG ACGAGGATGC CCCGCTCGCT 
TGCATCGAGG CGTGCTTGTA CGCCCACACA AAGTACCACA TCAAAGCAGC GCAATCTTCA 
CTGGTGCACA TGGACCAGTT GCTGTACACT GAGCTCTCTC TTAGCAGCTT TTACGGCGCG 
GTTGCCCACA TCTTCAAGAG TGAGGCCAGC TCGGCTTCCG GCTCACCGCT GCCGTATCTC 
CGCGAGTCGA TGCTACTGTG GGCACTGTGC CACTGCTTCG AGCTGAGGCG TGAGGTGGCG 
CGAACGACAT TCTGCTGCAA TGTGGGGTGT GCAGGGTGCG GCGTCTCGAC GCTCTCCTCA 
TGCATCTCGT CACTGTTGCA CCACGAGGAG GCCCGGCGCC ATGGACGCCG TGGGACGTGC 
TTCCGCACCG TCCAGTGCCG CATCGCGTCG AGTGGCCTAT CGGCTGTTTA CTTCGCTGCG 
CAGACGGGTG TGCGGTGTTG CGTCTTCCTG GCTGCGGAGG CGGCAGACTT GACGAGAGCC 
GAGTACACCT CAATGAGCGT TCACATTCAA GAGCACTTGA CCTACGCTGG GCAGCATGTG 
TTCCGGGTGA TTACAAAGGC AGACGAGCAC CTGCAGAGCA TCTCGGACCT GCGCAAGGAG 
CTTGAGAACG ACACTTCAGT GGCTGCCTTG ATGTCACGGG TTGGCGCACA GATGTTGGGC 
GGGTGCGGCA CAGAGGAGCA GCGGCTGGTG GTTGCTCTCG CCCCATCAAC CTCTCGACTT 
GTGGAGCTTA TTGCCTGTAC CCCCGCCGAG GTGGAGCAGT ACGCGCAGAG GCTGCGCTCA 
TACTCGGAGG CACTGCTCTT GGACTGTCTC CGCCTTAGCG TTCTTCGAGG GGACGCTGAC 
TGCACGAGGA CGGCTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_23_1940 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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