Gene Symbol | Akr1c20 |
Entrez Gene ID | 116852 |
Full Name | aldo-keto reductase family 1, member C20 |
Synonyms | 2610528B18Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Akr1c20 cDNA ORF clone
gRNAs
Gene Symbol | Akr1c20 |
Entrez Gene ID | 116852 |
Full Name | aldo-keto reductase family 1, member C20 |
Synonyms | 2610528B18Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_054080.1 | NP_473421.1 | aldo-keto reductase family 1, member C20 isoform 2 |
XM_030247130.1 | XP_030102990.1 | aldo-keto reductase family 1, member C20 isoform X3 |
XM_006516465.1 | XP_006516528.1 | aldo-keto reductase family 1, member C20 isoform X1 |
XM_006516466.1 | XP_006516529.1 | aldo-keto reductase family 1, member C20 isoform X2 |
NM_001311132.1 | NP_001298061.1 | aldo-keto reductase family 1, member C20 |
Enzymatic properties of a member (AKR1C20) of the aldo-keto reductase family.
Matsumoto K, Endo S, Ishikura S, Matsunaga T, Tajima K, El-Kabbani O, Hara A
Biological & pharmaceutical bulletin29(3)539-42(2006 Mar)
A cluster of eight hydroxysteroid dehydrogenase genes belonging to the aldo-keto reductase supergene family on mouse chromosome 13.
Vergnes L, Phan J, Stolz A, Reue K
Journal of lipid research44(3)503-11(2003 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
AKR1C20 is a novel 3alpha(17beta-hydroxysteroid dehydrogenase, which may also function as a reductase for xenobiotic alpha-dicarbonyl compounds
Title: Enzymatic properties of a member (AKR1C20) of the aldo-keto reductase family.
The following Akr1c20 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Akr1c20 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu72439 | |
Clone ID Related Accession (Same CDS sequence) | NM_001311132.1 | |
Accession Version | NM_001311132.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 972bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-31 | |
Organism | Mus musculus(house mouse) | |
Product | aldo-keto reductase family 1, member C20 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC166056.2, AK012162.1 and AI661346.1. On Jul 24, 2015 this sequence version replaced XM_006516464.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC021607.1, AB097220.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849386, SAMN01164135 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAATTCCA AGCAGCAGAC AGTTCTTCTA AATGATGGTC ACTTCATCCC TATACTCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001298061.1 |
CDS | 31..1002 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGAATTCCA AGCAGCAGAC AGTTCTTCTA AATGATGGTC ACTTCATCCC TATACTCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu09565 | |
Clone ID Related Accession (Same CDS sequence) | NM_054080.1 | |
Accession Version | NM_054080.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 789bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-04-24 | |
Organism | Mus musculus(house mouse) | |
Product | aldo-keto reductase family 1, member C20 isoform 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK012162.1. Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region and lacks two alternate 3' exons compared to variant 1. Its 3' terminal exon extends past a splice site that is used in variant 1. The encoded isoform (2) is shorter, and has a shorter and distinct C-terminus, compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: AK012162.1, AI047306.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849386 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAATTCCA AGCAGCAGAC AGTTCTTCTA AATGATGGTC ACTTCATCCC TATACTCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_473421.1 |
CDS | 20..808 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAATTCCA AGCAGCAGAC AGTTCTTCTA AATGATGGTC ACTTCATCCC TATACTCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu48276 | |
Clone ID Related Accession (Same CDS sequence) | XM_006516465.1 | |
Accession Version | XM_006516465.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 912bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | aldo-keto reductase family 1, member C20 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000079.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATTCCA AGCAGCAGAC AGTTCTTCTA AATGATGGTC ACTTCATCCC TATACTCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006516528.1 |
CDS | 41..952 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAATTCCA AGCAGCAGAC AGTTCTTCTA AATGATGGTC ACTTCATCCC TATACTCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu48277 | |
Clone ID Related Accession (Same CDS sequence) | XM_006516466.1 | |
Accession Version | XM_006516466.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 891bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | aldo-keto reductase family 1, member C20 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000079.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATTCCA AGCAGCAGAC AGTTCTTCTA AATGATGGTC ACTTCATCCC TATACTCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006516529.1 |
CDS | 41..931 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAATTCCA AGCAGCAGAC AGTTCTTCTA AATGATGGTC ACTTCATCCC TATACTCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu86214 | |
Clone ID Related Accession (Same CDS sequence) | XM_030247130.1 | |
Accession Version | XM_030247130.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 831bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | aldo-keto reductase family 1, member C20 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000079.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATTCCA AGCAGCAGAC AGTTCTTCTA AATGATGGTC ACTTCATCCC TATACTCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030102990.1 |
CDS | 41..871 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAATTCCA AGCAGCAGAC AGTTCTTCTA AATGATGGTC ACTTCATCCC TATACTCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Enzymatic properties of a member (AKR1C20) of the aldo-keto reductase family. |
A cluster of eight hydroxysteroid dehydrogenase genes belonging to the aldo-keto reductase supergene family on mouse chromosome 13. |