Gene Symbol | Supt6 |
Entrez Gene ID | 20926 |
Full Name | suppressor of Ty 6 |
Synonyms | 5131400N11Rik,AI132449,SPT6,Supt6h,mKIAA0162 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Supt6 cDNA ORF clone
Gene Symbol | Supt6 |
Entrez Gene ID | 20926 |
Full Name | suppressor of Ty 6 |
Synonyms | 5131400N11Rik,AI132449,SPT6,Supt6h,mKIAA0162 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006532743.4 | XP_006532806.1 | transcription elongation factor SPT6 isoform X1 |
NM_009297.2 | NP_033323.2 | transcription elongation factor SPT6 |
XM_006532743.3 | XP_006532806.1 | transcription elongation factor SPT6 isoform X1 |
SUPT6H | XP_001106850.2 | |
Canis lupus familiaris (dog) | SUPT6H | XP_537747.2 |
Caenorhabditis elegans (roundworm) | emb-5 | NP_497969.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_11491 | XP_003718184.1 |
Arabidopsis thaliana (thale cress) | AT1G63210 | NP_176510.1 |
Gallus gallus (chicken) | SUPT6H | XP_423183.3 |
Schizosaccharomyces pombe (fission yeast) | spt6 | NP_594487.2 |
Drosophila melanogaster (fruit fly) | Spt6 | NP_651962.2 |
Kluyveromyces lactis | KLLA0B11385g | XP_452036.1 |
Eremothecium gossypii | AGOS_AAR031W | NP_982572.2 |
Neurospora crassa | NCU04611 | XP_958854.1 |
Arabidopsis thaliana (thale cress) | GTB1 | NP_001077775.1 |
Xenopus tropicalis (tropical clawed frog) | supt6h | NP_001072665.1 |
Homo sapiens (human) | SUPT6H | NP_003161.2 |
Pan troglodytes (chimpanzee) | SUPT6H | XP_001143115.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP003619 | XP_313379.5 |
Saccharomyces cerevisiae (baker's yeast) | SPT6 | NP_011631.1 |
Bos taurus (cattle) | SUPT6H | NP_001180055.1 |
Mus musculus (house mouse) | Supt6 | NP_033323.2 |
Rattus norvegicus (Norway rat) | Supt6h | NP_001178749.1 |
Danio rerio (zebrafish) | supt6h | NP_660094.1 |
The Elongation Factor Spt6 Maintains ESC Pluripotency by Controlling Super-Enhancers and Counteracting Polycomb Proteins.
Wang AH, Juan AH, Ko KD, Tsai PF, Zare H, Dell'Orso S, Sartorelli V
Molecular cell68(2)398-413.e6(2017 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Biochemical as well as functional experiments revealed that Spt6 could compete for binding of the PRC2 methyltransferase Ezh2 to Suz12 and reduce PRC2 chromatin engagement.
Title: The Elongation Factor Spt6 Maintains ESC Pluripotency by Controlling Super-Enhancers and Counteracting Polycomb Proteins.
These data indicate that, through cooperation with PolII and KDM6A, Spt6 orchestrates removal of H3K27me3, thus controlling developmental gene expression and cell differentiation.
Title: The histone chaperone Spt6 coordinates histone H3K27 demethylation and myogenesis.
Knockdown of Spt6 resulted in severe reduction of class switch recombination in the endogenous Ig locus in B cells.
Title: Histone chaperone Spt6 is required for class switch recombination but not somatic hypermutation.
recombinant Spt6 binds selectively to a stretch of uninterrupted consensus repeats located in the N-terminal half of the CTD and recruits Iws1
Title: The Iws1:Spt6:CTD complex controls cotranscriptional mRNA biosynthesis and HYPB/Setd2-mediated histone H3K36 methylation.
Thus binding of Spt6 to Ser2-P RNAPII provides a cotranscriptional mechanism to recruit Iws1, REF1/Aly, and associated mRNA processing, surveillance, and export factors to responsive genes.
Title: The Spt6 SH2 domain binds Ser2-P RNAPII to direct Iws1-dependent mRNA splicing and export.
The following Supt6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Supt6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu45932 | |
Clone ID Related Accession (Same CDS sequence) | XM_006532743.4 , XM_006532743.3 | |
Accession Version | XM_006532743.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4812bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | transcription elongation factor SPT6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006532743.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTGATG ATGATGAAGA TGATGAAGAG GAATATGGCA AAGAGGAACA CGAGAAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006532806.1 |
CDS | 598..5409 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006532743.4 |
1 | ATGTCTGATG ATGATGAAGA TGATGAAGAG GAATATGGCA AAGAGGAACA CGAGAAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu45932 | |
Clone ID Related Accession (Same CDS sequence) | XM_006532743.4 , XM_006532743.3 | |
Accession Version | XM_006532743.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4812bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | transcription elongation factor SPT6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006532743.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTGATG ATGATGAAGA TGATGAAGAG GAATATGGCA AAGAGGAACA CGAGAAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006532806.1 |
CDS | 699..5510 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006532743.3 |
1 | ATGTCTGATG ATGATGAAGA TGATGAAGAG GAATATGGCA AAGAGGAACA CGAGAAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu21312 | |
Clone ID Related Accession (Same CDS sequence) | NM_009297.2 | |
Accession Version | NM_009297.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5181bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-10 | |
Organism | Mus musculus(house mouse) | |
Product | transcription elongation factor SPT6 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK136094.1, BC072657.1, AK158846.1 and AK052651.1. On Jan 25, 2008 this sequence version replaced NM_009297.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: U40375.1, SRR1660815.210579.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164139 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTCTGATT TTGTGGAAAG TGAGGCCGAA GAGTCAGAAG AAGAATACAA TCATGAAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_033323.2 |
CDS | 187..5367 |
Translation |
Target ORF information:
Target ORF information:
|
NM_009297.2 |
1 | ATGTCTGATT TTGTGGAAAG TGAGGCCGAA GAGTCAGAAG AAGAATACAA TCATGAAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The Elongation Factor Spt6 Maintains ESC Pluripotency by Controlling Super-Enhancers and Counteracting Polycomb Proteins. |