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Clic3 cDNA ORF clone, Mus musculus(house mouse)

Summary

Gene Symbol Clic3
Entrez Gene ID 69454
Full Name chloride intracellular channel 3
Synonyms 2300003G24Rik
General protein information
Preferred Names

chloride intracellular channel 3

Names

chloride intracellular channel protein 3
Gene Type protein-coding
Organism Mus musculus(house mouse)
Genome

2

2|2 A3

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_027085.3 NP_081361.1 chloride intracellular channel protein 3
XM_030252050.1 XP_030107910.1 chloride intracellular channel protein 3 isoform X1

Pathways from BioSystems


Homologies


Homo sapiens (human) CLIC3 NP_004660.2
Canis lupus familiaris (dog) CLIC3 XP_848692.1
Gallus gallus (chicken) LOC417293 XP_003642297.2
Xenopus tropicalis (tropical clawed frog) clic3 XP_002942018.1
Bos taurus (cattle) CLIC3 NP_001093771.1
Mus musculus (house mouse) Clic3 NP_081361.1
Danio rerio (zebrafish) clica NP_955818.1
Pan troglodytes (chimpanzee) CLIC3 XP_520422.2
Rattus norvegicus (Norway rat) Clic3 NP_001013098.2
LOC721634 XP_002808137.1

Gene Ontology


Bibliography

Related articles in PubMed

CRIg signals induce anti-intracellular bacterial phagosome activity in a chloride intracellular channel 3-dependent manner.
Kim KH, Choi BK, Song KM, Cha KW, Kim YH, Lee H, Han IS, Kwon BS
European journal of immunology43(3)667-78(2013 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

CRIg signals induce anti-intracellular bacterial phagosome activity in a chloride intracellular channel 3-dependent manner.
Title: CRIg signals induce anti-intracellular bacterial phagosome activity in a chloride intracellular channel 3-dependent manner.

The following Clic3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Clic3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMu03571 NM_027085.3
Latest version!		 Mus musculus chloride intracellular channel 3 (Clic3), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $188.30
$269.00
OMu87997 XM_030252050.1
Latest version!		 Mus musculus chloride intracellular channel 3 (Clic3), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OMu03571
Clone ID Related Accession (Same CDS sequence) NM_027085.3
Accession Version NM_027085.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 714bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-02-22
Organism Mus musculus(house mouse)
Product chloride intracellular channel protein 3
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL732557.4. On Apr 30, 2007 this sequence version replaced NM_027085.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AK009020.1, BC060967.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
ATGGCTGAAA CCACCAAGCT CCAGCTCTTT GTGAAGGCCA GTGAGGATGG CGAGAGCGTA 
GGACACTGCC CTTCCTGTCA GCGGCTCTTC ATGGTCCTAC TCCTCAAGGG TGTGCCCTTC 
ACACTCACCA CAGTGGACAC TCGAAGGGCA TTGGATGTGC TGAAGGACTT CGCACCAGGC 
TCACAGCTGC CCATCCTGCT GTACGATGGG GATGTCAAGA CAGACACACT GCAGATCGAG 
GAGTTTCTGG AGGAGACGTT GGGGCCACCT GACTTCCCTA GCCTGGCACC CAGGTACAGG 
GAGTCCAACA CAGCGGGCAA TGACATCTTC CACAAGTTCT CTGCCTTCAT CAAGAACCCA 
GTGCCTACAC AGGACAATGC CCTGTATCAG CAGCTGCTCC GGGCCCTGAC CAGGCTGGAC 
AGCTACCTGC GTGCACCACT GGACCACGAA CTGGCACAGG AGCCACATCT TCGTGAGTCC 
CACCGCCGCT TTCTCGATGG TGACCAGTTC ACGTTGGCTG ACTGCAGTCT ACTACCCAAG 
CTGCACATTG TGGATACCGT GTGTGCACAC TTCCGCCAGC TGCCCATCCC CGCGGAACTG 
TCCTGCGTTC GTCGCTACTT GGACAGTGCG TTGCAGAAGA AGGAGTTCAA GTATACGTGT 
CCACACAGCG CAGAGATCCT GGCTGCCTAC CAGCCTGCTG TGCACCCCCG TTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_081361.1
CDS37..750
Translation

Target ORF information:

RefSeq Version NM_027085.3
Organism Mus musculus(house mouse)
Definition Mus musculus chloride intracellular channel 3 (Clic3), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_027085.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGGCTGAAA CCACCAAGCT CCAGCTCTTT GTGAAGGCCA GTGAGGATGG CGAGAGCGTA 
GGACACTGCC CTTCCTGTCA GCGGCTCTTC ATGGTCCTAC TCCTCAAGGG TGTGCCCTTC 
ACACTCACCA CAGTGGACAC TCGAAGGGCA TTGGATGTGC TGAAGGACTT CGCACCAGGC 
TCACAGCTGC CCATCCTGCT GTACGATGGG GATGTCAAGA CAGACACACT GCAGATCGAG 
GAGTTTCTGG AGGAGACGTT GGGGCCACCT GACTTCCCTA GCCTGGCACC CAGGTACAGG 
GAGTCCAACA CAGCGGGCAA TGACATCTTC CACAAGTTCT CTGCCTTCAT CAAGAACCCA 
GTGCCTACAC AGGACAATGC CCTGTATCAG CAGCTGCTCC GGGCCCTGAC CAGGCTGGAC 
AGCTACCTGC GTGCACCACT GGACCACGAA CTGGCACAGG AGCCACATCT TCGTGAGTCC 
CACCGCCGCT TTCTCGATGG TGACCAGTTC ACGTTGGCTG ACTGCAGTCT ACTACCCAAG 
CTGCACATTG TGGATACCGT GTGTGCACAC TTCCGCCAGC TGCCCATCCC CGCGGAACTG 
TCCTGCGTTC GTCGCTACTT GGACAGTGCG TTGCAGAAGA AGGAGTTCAA GTATACGTGT 
CCACACAGCG CAGAGATCCT GGCTGCCTAC CAGCCTGCTG TGCACCCCCG TTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu87997
Clone ID Related Accession (Same CDS sequence) XM_030252050.1
Accession Version XM_030252050.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 807bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-07
Organism Mus musculus(house mouse)
Product chloride intracellular channel protein 3 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

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721
781
ATGCTCAACC AGGCCAGAGC CCTAGCCTGC CTCCAGAGCC AATGGCAGTG GGAGGCAGAG 
CTCCACCCAG CCAGGTGTCA GGATTCCTGG GTCTGCTCAG AGCCTGACAC CTCTGTTCCA 
CCCACCCAGG CCAGTGAGGA TGGCGAGAGC GTAGGACACT GCCCTTCCTG TCAGCGGCTC 
TTCATGGTCC TACTCCTCAA GGGTGTGCCC TTCACACTCA CCACAGTGGA CACTCGAAGG 
GCATTGGATG TGCTGAAGGA CTTCGCACCA GGCTCACAGC TGCCCATCCT GCTGTACGAT 
GGGGATGTCA AGACAGACAC ACTGCAGATC GAGGAGTTTC TGGAGGAGAC GTTGGGGCCA 
CCTGACTTCC CTAGCCTGGC ACCCAGGTAC AGGGAGTCCA ACACAGCGGG CAATGACATC 
TTCCACAAGT TCTCTGCCTT CATCAAGAAC CCAGTGCCTA CACAGGACAA TGCCCTGTAT 
CAGCAGCTGC TCCGGGCCCT GACCAGGCTG GACAGCTACC TGCGTGCACC ACTGGACCAC 
GAACTGGCAC AGGAGCCACA TCTTCGTGAG TCCCACCGCC GCTTTCTCGA TGGTGACCAG 
TTCACGTTGG CTGACTGCAG TCTACTACCC AAGCTGCACA TTGTGGATAC CGTGTGTGCA 
CACTTCCGCC AGCTGCCCAT CCCCGCGGAA CTGTCCTGCG TTCGTCGCTA CTTGGACAGT 
GCGTTGCAGA AGAAGGAGTT CAAGTATACG TGTCCACACA GCGCAGAGAT CCTGGCTGCC 
TACCAGCCTG CTGTGCACCC CCGTTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_030107910.1
CDS101..907
Translation

Target ORF information:

RefSeq Version XM_030252050.1
Organism Mus musculus(house mouse)
Definition Mus musculus chloride intracellular channel 3 (Clic3), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_030252050.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
ATGCTCAACC AGGCCAGAGC CCTAGCCTGC CTCCAGAGCC AATGGCAGTG GGAGGCAGAG 
CTCCACCCAG CCAGGTGTCA GGATTCCTGG GTCTGCTCAG AGCCTGACAC CTCTGTTCCA 
CCCACCCAGG CCAGTGAGGA TGGCGAGAGC GTAGGACACT GCCCTTCCTG TCAGCGGCTC 
TTCATGGTCC TACTCCTCAA GGGTGTGCCC TTCACACTCA CCACAGTGGA CACTCGAAGG 
GCATTGGATG TGCTGAAGGA CTTCGCACCA GGCTCACAGC TGCCCATCCT GCTGTACGAT 
GGGGATGTCA AGACAGACAC ACTGCAGATC GAGGAGTTTC TGGAGGAGAC GTTGGGGCCA 
CCTGACTTCC CTAGCCTGGC ACCCAGGTAC AGGGAGTCCA ACACAGCGGG CAATGACATC 
TTCCACAAGT TCTCTGCCTT CATCAAGAAC CCAGTGCCTA CACAGGACAA TGCCCTGTAT 
CAGCAGCTGC TCCGGGCCCT GACCAGGCTG GACAGCTACC TGCGTGCACC ACTGGACCAC 
GAACTGGCAC AGGAGCCACA TCTTCGTGAG TCCCACCGCC GCTTTCTCGA TGGTGACCAG 
TTCACGTTGG CTGACTGCAG TCTACTACCC AAGCTGCACA TTGTGGATAC CGTGTGTGCA 
CACTTCCGCC AGCTGCCCAT CCCCGCGGAA CTGTCCTGCG TTCGTCGCTA CTTGGACAGT 
GCGTTGCAGA AGAAGGAGTT CAAGTATACG TGTCCACACA GCGCAGAGAT CCTGGCTGCC 
TACCAGCCTG CTGTGCACCC CCGTTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

CRIg signals induce anti-intracellular bacterial phagosome activity in a chloride intracellular channel 3-dependent manner.
European journal of immunology43(3)667-78(2013 Mar)
Kim KH,Choi BK,Song KM,Cha KW,Kim YH,Lee H,Han IS,Kwon BS